def test_set_pdf_bin_new(mock_init_sample, name):
bib = bm.find(key='ShowmanEtal2009apjRadGCM')
bin_pdf = b'file.pdf'
pm.set_pdf(bib, bin_pdf=bin_pdf, filename=name)
filename = 'Showman2009_ApJ_699_564.pdf' if name is None else name
assert filename in os.listdir(u.BM_PDF())
bib = bm.find(key=bib.key)
assert bib.pdf == filename
def test_set_pdf_bin_overwrite_rename(mock_init_sample, mock_input):
bib = bm.find(key='ShowmanEtal2009apjRadGCM')
bin_pdf = b'file.pdf'
name = 'new.pdf'
pathlib.Path(f"{u.BM_PDF()}{name}").touch()
pm.set_pdf(bib, bin_pdf=bin_pdf, filename=name)
assert 'new_new.pdf' in os.listdir(u.BM_PDF())
bib = bm.find(key=bib.key)
assert bib.pdf == 'new_new.pdf'
def test_set_pdf_in_new(mock_init_sample, name):
bib = bm.find(key='ShowmanEtal2009apjRadGCM')
pdf = u.BM_PDF() + 'file.pdf'
pathlib.Path(pdf).touch()
pm.set_pdf(bib, pdf=pdf, filename=name)
filename = 'file.pdf' if name is None else name
assert filename in os.listdir(u.BM_PDF())
bib = bm.find(key=bib.key)
assert bib.pdf == filename
def test_set_pdf_overwrite_no(mock_init_sample, mock_input):
bib = bm.find(key='ShowmanEtal2009apjRadGCM')
pdf = 'file.pdf'
name = 'new.pdf'
pathlib.Path(pdf).touch()
pathlib.Path(f"{u.BM_PDF()}{name}").touch()
pm.set_pdf(bib, pdf=pdf, filename=name)
assert name in os.listdir(u.BM_PDF())
bib = bm.find(key=bib.key)
assert bib.pdf is None
def test_set_pdf_bin_replace_ask_no(mock_init_sample, mock_input):
bib = bm.find(key='Slipher1913lobAndromedaRarialVelocity')
bin_pdf = b'file.pdf'
old = f"{u.BM_PDF()}{bib.pdf}"
name = 'new.pdf'
pathlib.Path(old).touch()
pm.set_pdf(bib, bin_pdf=bin_pdf, filename=name)
assert name not in os.listdir(u.BM_PDF())
assert os.path.basename(old) in os.listdir(u.BM_PDF())
bib = bm.find(key=bib.key)
assert bib.pdf == os.path.basename(old)
def test_set_pdf_rename(mock_init_sample, replace):
bib = bm.find(key='Slipher1913lobAndromedaRarialVelocity')
old = f"{u.BM_PDF()}{bib.pdf}"
pdf = old
name = 'new.pdf'
pathlib.Path(old).touch()
pm.set_pdf(bib, pdf=pdf, filename=name, replace=replace)
assert name in os.listdir(u.BM_PDF())
assert old not in os.listdir(u.BM_PDF())
bib = bm.find(key=bib.key)
assert bib.pdf == name
def test_set_pdf_bin_replace(mock_init_sample):
bib = bm.find(key='Slipher1913lobAndromedaRarialVelocity')
bin_pdf = b'file.pdf'
pdf = 'file.pdf'
name = 'new.pdf'
old = f"{u.BM_PDF()}{bib.pdf}"
pathlib.Path(old).touch()
pm.set_pdf(bib, bin_pdf=bin_pdf, filename=name, replace=True)
filename = 'file.pdf' if name is None else name
assert filename in os.listdir(u.BM_PDF())
assert os.path.basename(old) not in os.listdir(u.BM_PDF())
bib = bm.find(key=bib.key)
assert bib.pdf == filename
def test_set_pdf_overwrite_yes(mock_init_sample, mock_input):
bib = bm.find(key='ShowmanEtal2009apjRadGCM')
pdf = 'file.pdf'
name = 'new.pdf'
pathlib.Path(pdf).touch()
pathlib.Path(f"{u.BM_PDF()}{name}").touch()
out_filename = pm.set_pdf(bib, pdf=pdf, filename=name)
assert name in os.listdir(u.BM_PDF())
bib = bm.find(key=bib.key)
assert bib.pdf == name
# TBD: Check if previous file belongs to another entry?
assert out_filename is not None
assert out_filename == f"{u.BM_PDF()}{name}"
def test_set_pdf_replace_ask_yes(mock_init_sample, mock_input):
bib = bm.find(key='Slipher1913lobAndromedaRarialVelocity')
pdf = 'file.pdf'
name = 'new.pdf'
old = f"{u.BM_PDF()}{bib.pdf}"
pathlib.Path(old).touch()
pathlib.Path(pdf).touch()
out_filename = pm.set_pdf(bib, pdf=pdf, filename=name)
filename = 'file.pdf' if name is None else name
assert filename in os.listdir(u.BM_PDF())
assert os.path.basename(old) not in os.listdir(u.BM_PDF())
bib = bm.find(key=bib.key)
assert bib.pdf == filename
assert out_filename is not None
assert out_filename == f"{u.BM_PDF()}{filename}"
def test_find_key_bibcode(mock_init_sample):
key = 'AASteamHendrickson2018aastex62'
bibcode = '2013A&A...558A..33A'
bib = bm.find(key=key, bibcode=bibcode)
assert bib is not None
assert bib.key == key
assert bib.bibcode != bibcode
def test_set_pdf_duplicate_pdf(mock_init_sample):
bib = bm.find(key='ShowmanEtal2009apjRadGCM')
pdf = 'file.pdf'
bin_pdf = b'file.pdf'
with pytest.raises(ValueError,
match='Exactly one of pdf or bin_pdf must be not None'):
pm.set_pdf(bib, pdf=pdf, bin_pdf=bin_pdf)
def test_cli_pdf_set_pathed_filename(capsys, mock_init_sample):
sys.argv = "bibm pdf 1957RvMP...29..547B file.pdf ./new.pdf".split()
pathlib.Path("file.pdf").touch()
cli.main()
captured = capsys.readouterr()
assert captured.out == "\nError: filename must not have a path\n"
bib = bm.find(bibcode='1957RvMP...29..547B')
assert bib.pdf is None
def test_set_pdf_str_bib(mock_init_sample, bib):
pdf = 'file.pdf'
name = 'new.pdf'
pathlib.Path(pdf).touch()
pm.set_pdf(bib, pdf=pdf, filename=name)
assert name in os.listdir(u.BM_PDF())
bib = bm.find(key='ShowmanEtal2009apjRadGCM')
assert bib.pdf == name
def test_cli_pdf_set_missing_pdf(capsys, mock_init_sample):
sys.argv = f"bibm pdf 1957RvMP...29..547B".split()
pathlib.Path(f"file.pdf").touch()
cli.main()
captured = capsys.readouterr()
assert captured.out == "\nError: Path to PDF file is missing.\n"
bib = bm.find(bibcode='1957RvMP...29..547B')
assert bib.pdf is None
def test_cli_pdf_set_invalid_name(capsys, mock_init_sample):
sys.argv = "bibm pdf 1957RvMP...29..547B file.pdf pdf_file".split()
pathlib.Path("file.pdf").touch()
cli.main()
captured = capsys.readouterr()
assert captured.out == \
"\nError: Invalid filename, must have a .pdf extension\n"
bib = bm.find(bibcode='1957RvMP...29..547B')
assert bib.pdf is None
def test_cli_pdf_set_renamed(capsys, mock_init_sample, mock_call):
sys.argv = f"bibm pdf 1957RvMP...29..547B file.pdf new.pdf".split()
pathlib.Path(f"file.pdf").touch()
cli.main()
captured = capsys.readouterr()
assert captured.out == f"Saved PDF to: '{u.BM_PDF()}new.pdf'.\n"
bib = bm.find(bibcode='1957RvMP...29..547B')
assert bib.pdf == 'new.pdf'
assert 'new.pdf' in os.listdir(u.BM_PDF())
def test_cli_pdf_set_missing_bib(capsys, mock_init_sample):
sys.argv = f"bibm pdf 1957RvMP...00..000X file.pdf".split()
pathlib.Path("file.pdf").touch()
cli.main()
captured = capsys.readouterr()
assert captured.out == \
"\nError: BibTex entry is not in Bibmanager database.\n"
bib = bm.find(bibcode='1957RvMP...29..547B')
assert bib.pdf is None
def test_cli_pdf_set_missing_pdf_file(capsys, mock_init_sample):
sys.argv = "bibm pdf 1957RvMP...29..547B file.pdf".split()
with u.ignored(OSError):
os.remove('file.pdf')
cli.main()
captured = capsys.readouterr()
assert captured.out == "\nError: input PDF file does not exist.\n"
bib = bm.find(bibcode='1957RvMP...29..547B')
assert bib.pdf is None
def test_cli_pdf_set_prompt_missing_pdf(capsys, mock_init_sample,
mock_prompt_session):
sys.argv = f"bibm pdf".split()
pathlib.Path(f"file.pdf").touch()
cli.main()
captured = capsys.readouterr()
assert captured.out == (
"Syntax is: key: KEY_VALUE PDF_FILE FILENAME\n"
" or: bibcode: BIBCODE_VALUE PDF_FILE FILENAME\n"
"(output FILENAME is optional, set it to guess for automated naming)\n"
"\n\nError: Path to PDF file is missing.\n")
bib = bm.find(bibcode='1957RvMP...29..547B')
assert bib.pdf is None
def test_cli_pdf_set_prompt_guess(capsys, mock_init_sample, mock_call,
mock_prompt_session):
sys.argv = f"bibm pdf".split()
pathlib.Path(f"file.pdf").touch()
cli.main()
captured = capsys.readouterr()
assert captured.out == (
"Syntax is: key: KEY_VALUE PDF_FILE FILENAME\n"
" or: bibcode: BIBCODE_VALUE PDF_FILE FILENAME\n"
"(output FILENAME is optional, set it to guess for automated naming)\n"
f"\nSaved PDF to: '{u.BM_PDF()}Burbidge1957_RvMP_29_547.pdf'.\n")
bib = bm.find(bibcode='1957RvMP...29..547B')
assert bib.pdf == 'Burbidge1957_RvMP_29_547.pdf'
assert 'Burbidge1957_RvMP_29_547.pdf' in os.listdir(u.BM_PDF())
def test_find_no_arguments(mock_init_sample):
with pytest.raises(
ValueError,
match="Either key or bibcode arguments must be specified."):
bib = bm.find()
def test_find_bibs(bibs):
key = 'StoddenEtal2009ciseRRlegal'
my_bibs = [bibs["beaulieu_apj"], bibs["stodden"]]
bib = bm.find(key=key, bibs=my_bibs)
assert bib is not None
assert bib.key == key
def test_find_bibcode_not_found(mock_init_sample):
bib = bm.find(bibcode='non_existing_bibcode')
assert bib is None
def test_find_key_not_found(mock_init_sample):
bib = bm.find(key='non_existing_key')
assert bib is None
def test_find_bibcode(mock_init_sample):
bibcode = '2013A&A...558A..33A'
bib = bm.find(bibcode=bibcode)
assert bib is not None
assert bib.bibcode == bibcode
def test_find_key(mock_init_sample):
key = 'AASteamHendrickson2018aastex62'
bib = bm.find(key=key)
assert bib is not None
assert bib.key == key
def test_set_pdf_invalid_extension(mock_init_sample):
bib = bm.find(key='ShowmanEtal2009apjRadGCM')
bin_pdf = b'file.pdf'
with pytest.raises(ValueError,
match='Invalid filename, must have a .pdf extension'):
pm.set_pdf(bib, bin_pdf=bin_pdf, filename='pdf_file')
def test_set_pdf_pathed_filename(mock_init_sample):
bib = bm.find(key='ShowmanEtal2009apjRadGCM')
bin_pdf = b'file.pdf'
with pytest.raises(ValueError,
match='filename must not have a path'):
pm.set_pdf(bib, bin_pdf=bin_pdf, filename='./file.pdf')
def test_set_pdf_undefined_pdf(mock_init_sample):
bib = bm.find(key='ShowmanEtal2009apjRadGCM')
with pytest.raises(ValueError,
match='Exactly one of pdf or bin_pdf must be not None'):
pm.set_pdf(bib)
