Esempio n. 1
0
    def __call__(self):
        ar = self.context
        workflow = getToolByName(self.context, 'portal_workflow')
        if 'transition' in self.request.form:
            doActionFor(self.context, self.request.form['transition'])
        # Contacts get expanded for view
        contact = self.context.getContact()
        contacts = []
        for cc in self.context.getCCContact():
            contacts.append(cc)
        if contact in contacts:
            contacts.remove(contact)
        ccemails = []
        for cc in contacts:
            ccemails.append("%s &lt;<a href='mailto:%s'>%s</a>&gt;"
                            % (cc.Title(), cc.getEmailAddress(), cc.getEmailAddress()))
        # CC Emails become mailto links
        emails = self.context.getCCEmails()
        if isinstance(emails, str):
            emails = emails and [emails, ] or []
        cc_emails = []
        cc_hrefs = []
        for cc in emails:
            cc_emails.append(cc)
            cc_hrefs.append("<a href='mailto:%s'>%s</a>" % (cc, cc))
        # render header table
        self.header_table = HeaderTableView(self.context, self.request)()
        # Create Partitions View for this ARs sample
        p = SamplePartitionsView(self.context.getSample(), self.request)
        p.show_column_toggles = False
        self.parts = p.contents_table()
        # Create Field and Lab Analyses tables
        self.tables = {}
        for poc in POINTS_OF_CAPTURE:
            if self.context.getAnalyses(getPointOfCapture=poc):
                t = self.createAnalysesView(
                    ar,
                    self.request,
                    getPointOfCapture=poc,
                    show_categories=self.context.bika_setup.getCategoriseAnalysisServices())
                t.allow_edit = True
                t.form_id = "%s_analyses" % poc
                t.review_states[0]['transitions'] = [{'id': 'submit'},
                                                     {'id': 'retract'},
                                                     {'id': 'verify'}]
                t.show_workflow_action_buttons = True
                t.show_select_column = True
                if getSecurityManager().checkPermission(EditFieldResults, self.context) \
                   and poc == 'field':
                    t.review_states[0]['columns'].remove('DueDate')
                self.tables[POINTS_OF_CAPTURE.getValue(poc)] = t.contents_table()
        # Create QC Analyses View for this AR
        show_cats = self.context.bika_setup.getCategoriseAnalysisServices()
        qcview = self.createQCAnalyesView(ar,
                                          self.request,
                                          show_categories=show_cats)
        qcview.allow_edit = False
        qcview.show_select_column = False
        qcview.show_workflow_action_buttons = False
        qcview.form_id = "%s_qcanalyses"
        qcview.review_states[0]['transitions'] = [{'id': 'submit'},
                                                  {'id': 'retract'},
                                                  {'id': 'verify'}]
        self.qctable = qcview.contents_table()

        # Create the ResultsInterpretation by department view
        from resultsinterpretation import ARResultsInterpretationView
        self.riview = ARResultsInterpretationView(ar, self.request)

        # If a general retracted is done, rise a waring
        if workflow.getInfoFor(ar, 'review_state') == 'sample_received':
            allstatus = list()
            for analysis in ar.getAnalyses():
                status = workflow.getInfoFor(analysis.getObject(), 'review_state')
                if status not in ['retracted', 'to_be_verified', 'verified']:
                    allstatus = []
                    break
                else:
                    allstatus.append(status)
            if len(allstatus) > 0:
                message = "General Retract Done.  Submit this AR manually."
                self.addMessage(message, 'warning')

        # If is a retracted AR, show the link to child AR and show a warn msg
        if workflow.getInfoFor(ar, 'review_state') == 'invalid':
            childar = hasattr(ar, 'getChildAnalysisRequest') and \
                ar.getChildAnalysisRequest() or None
            message = _('These results have been withdrawn and are '
                        'listed here for trace-ability purposes. Please follow '
                        'the link to the retest')
            if childar:
                message = (message + " %s.") % childar.getRequestID()
            else:
                message = message + "."
            self.addMessage(message, 'warning')
        # If is an AR automatically generated due to a Retraction, show it's
        # parent AR information
        if hasattr(ar, 'getParentAnalysisRequest') and \
           ar.getParentAnalysisRequest():

            par = ar.getParentAnalysisRequest()
            message = _('This Analysis Request has been '
                        'generated automatically due to '
                        'the retraction of the Analysis '
                        'Request ${retracted_request_id}.',
                        mapping={'retracted_request_id': par.getRequestID()})
            self.addMessage(message, 'info')
        self.renderMessages()
        return self.template()
Esempio n. 2
0
    def __call__(self):
        ar = self.context
        workflow = getToolByName(self.context, 'portal_workflow')
        if 'transition' in self.request.form:
            doActionFor(self.context, self.request.form['transition'])
        # Contacts get expanded for view
        contact = self.context.getContact()
        contacts = []
        for cc in self.context.getCCContact():
            contacts.append(cc)
        if contact in contacts:
            contacts.remove(contact)
        ccemails = []
        for cc in contacts:
            ccemails.append(
                "%s &lt;<a href='mailto:%s'>%s</a>&gt;" %
                (cc.Title(), cc.getEmailAddress(), cc.getEmailAddress()))
        # CC Emails become mailto links
        emails = self.context.getCCEmails()
        if isinstance(emails, str):
            emails = emails and [
                emails,
            ] or []
        cc_emails = []
        cc_hrefs = []
        for cc in emails:
            cc_emails.append(cc)
            cc_hrefs.append("<a href='mailto:%s'>%s</a>" % (cc, cc))
        # render header table
        self.header_table = HeaderTableView(self.context, self.request)()
        # Create Partitions View for this ARs sample
        p = SamplePartitionsView(self.context.getSample(), self.request)
        p.show_column_toggles = False
        self.parts = p.contents_table()
        # Create Field and Lab Analyses tables
        self.tables = {}
        for poc in POINTS_OF_CAPTURE:
            if self.context.getAnalyses(getPointOfCapture=poc):
                t = self.createAnalysesView(
                    ar,
                    self.request,
                    getPointOfCapture=poc,
                    show_categories=self.context.bika_setup.
                    getCategoriseAnalysisServices())
                t.allow_edit = True
                t.form_id = "%s_analyses" % poc
                t.review_states[0]['transitions'] = [{
                    'id': 'submit'
                }, {
                    'id': 'retract'
                }, {
                    'id': 'verify'
                }]
                t.show_workflow_action_buttons = True
                t.show_select_column = True
                if getSecurityManager().checkPermission(EditFieldResults, self.context) \
                   and poc == 'field':
                    t.review_states[0]['columns'].remove('DueDate')
                self.tables[POINTS_OF_CAPTURE.getValue(
                    poc)] = t.contents_table()
        # Un-captured field analyses may cause confusion
        if ar.getAnalyses(getPointOfCapture='field',
                          review_state=['sampled', 'sample_due']):
            message = _("There are field analyses without submitted results.")
            self.addMessage(message, 'info')
        # Create QC Analyses View for this AR
        show_cats = self.context.bika_setup.getCategoriseAnalysisServices()
        qcview = self.createQCAnalyesView(ar,
                                          self.request,
                                          show_categories=show_cats)
        qcview.allow_edit = False
        qcview.show_select_column = False
        qcview.show_workflow_action_buttons = False
        qcview.form_id = "%s_qcanalyses"
        qcview.review_states[0]['transitions'] = [{
            'id': 'submit'
        }, {
            'id': 'retract'
        }, {
            'id': 'verify'
        }]
        self.qctable = qcview.contents_table()
        # If a general retracted is done, rise a waring
        if workflow.getInfoFor(ar, 'review_state') == 'sample_received':
            allstatus = list()
            for analysis in ar.getAnalyses():
                status = workflow.getInfoFor(analysis.getObject(),
                                             'review_state')
                if status not in ['retracted', 'to_be_verified', 'verified']:
                    allstatus = []
                    break
                else:
                    allstatus.append(status)
            if len(allstatus) > 0:
                self.addMessage("General Retract Done", 'warning')

        # If is a retracted AR, show the link to child AR and show a warn msg
        if workflow.getInfoFor(ar, 'review_state') == 'invalid':
            childar = hasattr(ar, 'getChildAnalysisRequest') \
                        and ar.getChildAnalysisRequest() or None
            message = _(
                'These results have been withdrawn and are '
                'listed here for trace-ability purposes. Please follow '
                'the link to the retest')
            if childar:
                message = (message + " %s.") % childar.getRequestID()
            else:
                message = message + "."
            self.addMessage(message, 'warning')
        # If is an AR automatically generated due to a Retraction, show it's
        # parent AR information
        if hasattr(ar, 'getParentAnalysisRequest') \
            and ar.getParentAnalysisRequest():
            par = ar.getParentAnalysisRequest()
            message = _(
                'This Analysis Request has been '
                'generated automatically due to '
                'the retraction of the Analysis '
                'Request ${retracted_request_id}.',
                mapping={'retracted_request_id': par.getRequestID()})
            self.addMessage(message, 'info')
        self.renderMessages()
        return self.template()
Esempio n. 3
0
    def __call__(self):
        ar = self.context
        workflow = getToolByName(self.context, 'portal_workflow')
        if 'transition' in self.request.form:
            doActionFor(self.context, self.request.form['transition'])

        # If the analysis request has been received and hasn't been yet
        # verified yet, redirect the user to manage_results view, but only if
        # the user has privileges to Edit(Field)Results, cause otherwise she/he
        # will receive an InsufficientPrivileges error!
        if (self.request.PATH_TRANSLATED.endswith(self.context.id)
                and check_permission(EditResults, self.context)
                and check_permission(EditFieldResults, self.context)
                and wasTransitionPerformed(self.context, 'receive')
                and not wasTransitionPerformed(self.context, 'verify')):
            # Redirect to manage results view if not cancelled
            if api.get_workflow_status_of(ar, 'cancellation_state') != \
                    "cancelled":
                manage_results_url = "/".join(
                    [self.context.absolute_url(), 'manage_results'])
                self.request.response.redirect(manage_results_url)
                return

        # Contacts get expanded for view
        contact = self.context.getContact()
        contacts = []
        for cc in self.context.getCCContact():
            contacts.append(cc)
        if contact in contacts:
            contacts.remove(contact)
        ccemails = []
        for cc in contacts:
            ccemails.append(
                "%s &lt;<a href='mailto:%s'>%s</a>&gt;" %
                (cc.Title(), cc.getEmailAddress(), cc.getEmailAddress()))
        # CC Emails become mailto links
        emails = self.context.getCCEmails()
        if isinstance(emails, str):
            emails = emails and [
                emails,
            ] or []
        cc_emails = []
        cc_hrefs = []
        for cc in emails:
            cc_emails.append(cc)
            cc_hrefs.append("<a href='mailto:%s'>%s</a>" % (cc, cc))
        # render header table
        self.header_table = HeaderTableView(self.context, self.request)()
        # Create Partitions View for this ARs sample
        p = SamplePartitionsView(self.context.getSample(), self.request)
        p.show_column_toggles = False
        self.parts = p.contents_table()
        # Create Field and Lab Analyses tables
        self.tables = {}
        for poc in POINTS_OF_CAPTURE:
            if self.context.getAnalyses(getPointOfCapture=poc):
                t = self.createAnalysesView(
                    ar,
                    self.request,
                    getPointOfCapture=poc,
                    show_categories=self.context.bika_setup.
                    getCategoriseAnalysisServices(),
                    getRequestUID=self.context.UID())
                t.allow_edit = True
                t.form_id = "%s_analyses" % poc
                t.review_states[0]['transitions'] = [{
                    'id': 'submit'
                }, {
                    'id': 'retract'
                }, {
                    'id': 'verify'
                }]
                t.show_workflow_action_buttons = True
                t.show_select_column = True
                if getSecurityManager().checkPermission(EditFieldResults, self.context) \
                   and poc == 'field':
                    t.review_states[0]['columns'].remove('DueDate')
                self.tables[POINTS_OF_CAPTURE.getValue(
                    poc)] = t.contents_table()
        # Create QC Analyses View for this AR
        show_cats = self.context.bika_setup.getCategoriseAnalysisServices()
        qcview = self.createQCAnalyesView(ar,
                                          self.request,
                                          show_categories=show_cats)
        qcview.allow_edit = False
        qcview.show_select_column = False
        qcview.show_workflow_action_buttons = False
        qcview.form_id = "%s_qcanalyses"
        qcview.review_states[0]['transitions'] = [{
            'id': 'submit'
        }, {
            'id': 'retract'
        }, {
            'id': 'verify'
        }]
        self.qctable = qcview.contents_table()

        # Create the ResultsInterpretation by department view
        from resultsinterpretation import ARResultsInterpretationView
        self.riview = ARResultsInterpretationView(ar, self.request)

        # If a general retracted is done, rise a waring
        if workflow.getInfoFor(ar, 'review_state') == 'sample_received':
            allstatus = list()
            for analysis in ar.getAnalyses():
                status = workflow.getInfoFor(analysis.getObject(),
                                             'review_state')
                if status not in ['retracted', 'to_be_verified', 'verified']:
                    allstatus = []
                    break
                else:
                    allstatus.append(status)
            if len(allstatus) > 0:
                message = "General Retract Done.  Submit this AR manually."
                self.addMessage(message, 'warning')

        # If is a retracted AR, show the link to child AR and show a warn msg
        if workflow.getInfoFor(ar, 'review_state') == 'invalid':
            childar = hasattr(ar, 'getChildAnalysisRequest') \
                        and ar.getChildAnalysisRequest() or None
            message = _(
                'These results have been withdrawn and are '
                'listed here for trace-ability purposes. Please follow '
                'the link to the retest')
            if childar:
                message = (message + " %s.") % childar.getId()
            else:
                message = message + "."
            self.addMessage(message, 'warning')
        # If is an AR automatically generated due to a Retraction, show it's
        # parent AR information
        if hasattr(ar, 'getParentAnalysisRequest') \
            and ar.getParentAnalysisRequest():
            par = ar.getParentAnalysisRequest()
            message = _(
                'This Analysis Request has been '
                'generated automatically due to '
                'the retraction of the Analysis '
                'Request ${retracted_request_id}.',
                mapping={'retracted_request_id': par.getId()})
            self.addMessage(message, 'info')
        self.renderMessages()
        return self.template()