def __init__(self,
seqrecord,
draw_type='simple',
gene_to_draw=None,
feature_class_qualifier='ft_description',
feature_name_qualifier='hit_name',
**kwargs):
self.seqrecord = seqrecord
self.panel = Panel(**kwargs)
self.feature_class_qualifier = feature_class_qualifier
self.feature_name_qualifier = feature_name_qualifier
if draw_type == 'simple':
ref_obj_track = tracks.BaseTrack(
features.Simple(
1,
len(self.seqrecord),
height=1.5,
name=seqrecord.name,
color_by_cm=True,
track_lines=3,
alpha=1,
))
self.panel.add_track(ref_obj_track)
self.draw_features()
elif draw_type == 'gene structure':
self.draw_features_ordered_by_gene_struct(gene_code=gene_to_draw)
