def __init__(self, name, options=None, no_log=False):
"""
Get a bank from db or creates a new one
:param name: name of the bank, must match its config file
:type name: str
:param options: bank options
:type options: argparse
:param no_log: create a log file for the bank
:type no_log: bool
"""
logging.debug('Initialize ' + name)
if BiomajConfig.global_config is None:
raise Exception('Configuration must be loaded first')
self.name = name
self.depends = []
self.no_log = no_log
if no_log:
if options is None:
# options = {'no_log': True}
options = Options()
options.no_log = True
else:
options.no_log = no_log
self.config = BiomajConfig(self.name, options)
if self.config.get('bank.num.threads') is not None:
ProcessFactory.NB_THREAD = int(self.config.get('bank.num.threads'))
if self.config.log_file is not None and self.config.log_file != 'none':
logging.info("Log file: " + self.config.log_file)
# self.options = Options(options)
if options is None:
self.options = Options()
else:
self.options = options
if MongoConnector.db is None:
MongoConnector(BiomajConfig.global_config.get('GENERAL', 'db.url'),
BiomajConfig.global_config.get('GENERAL', 'db.name'))
self.banks = MongoConnector.banks
self.bank = self.banks.find_one({'name': self.name})
if self.bank is None:
self.bank = {
'name': self.name,
'current': None,
'sessions': [],
'production': [],
'properties': self.get_properties()
}
self.bank['_id'] = self.banks.insert(self.bank)
self.session = None
self.use_last_session = False
def setUp(self):
self.utils = UtilsForTest()
curdir = os.path.dirname(os.path.realpath(__file__))
BiomajConfig.load_config(self.utils.global_properties,
allow_user_config=False)
#Delete all banks
b = Bank('local')
b.banks.remove({})
self.config = BiomajConfig('local')
data_dir = self.config.get('data.dir')
lock_file = os.path.join(data_dir, 'local.lock')
if os.path.exists(lock_file):
os.remove(lock_file)
def setUp(self):
BmajIndex.es = None
self.utils = UtilsForTest()
curdir = os.path.dirname(os.path.realpath(__file__))
BiomajConfig.load_config(self.utils.global_properties,
allow_user_config=False)
if BmajIndex.do_index == False:
self.skipTest(
"Skipping indexing tests due to elasticsearch not available")
# Delete all banks
b = Bank('local')
b.banks.remove({})
BmajIndex.delete_all_bank('local')
self.config = BiomajConfig('local')
data_dir = self.config.get('data.dir')
lock_file = os.path.join(data_dir, 'local.lock')
if os.path.exists(lock_file):
os.remove(lock_file)
def setUp(self):
self.utils = UtilsForTest()
BiomajConfig.load_config(self.utils.global_properties,
allow_user_config=False)
self.config = BiomajConfig('testhttp')
