Esempi in Python per ChEBI.conv

Esempio n. 1

File: test_chebi.py Progetto: kpalin/bioservices

def test_chebi():
    ch = ChEBI()
    ch.getCompleteEntity("CHEBI:10102")
    res = ch.conv("CHEBI:10102", "ChEMBL COMPOUND")
    assert res == ["521332"]
    try:
        res = ch.conv("CHEBI:10102", "wrong db")
        assert False
    except:
        assert True

    ch.getOntologyChildren("CHEBI:27732")
    ch.getOntologyParents("CHEBI:27732")
    ch.getUpdatedPolymer("CHEBI:27732")

Esempio n. 2

def test_chebi():
    ch = ChEBI()
    ch.getCompleteEntity("CHEBI:10102")
    res = ch.conv("CHEBI:10102", "ChEMBL COMPOUND")
    assert res == ["521332"]
    try:
        res = ch.conv("CHEBI:10102", "wrong db")
        assert False
    except:
        assert True

    ch.getOntologyChildren("CHEBI:27732")
    ch.getOntologyParents("CHEBI:27732")
    ch.getUpdatedPolymer("CHEBI:27732")

Esempio n. 3

File: test_chebi.py Progetto: cokelaer/bioservices

def test_chebi():
    ch = ChEBI()
    ch.getCompleteEntity("CHEBI:10102")
    res = ch.conv("CHEBI:10102", "KEGG COMPOUND accession")
    assert res == ['C07484']

    try:
        res = ch.conv("CHEBI:10102", "wrong db")
        assert False
    except:
        assert True

    ch.getOntologyChildren("CHEBI:27732")
    ch.getOntologyParents("CHEBI:27732")
    ch.getUpdatedPolymer("CHEBI:27732")

Esempio n. 4

File: test_chebi.py Progetto: sujaypatil96/bioservices

def test_chebi():
    ch = ChEBI()
    ch.getCompleteEntity("CHEBI:10102")
    res = ch.conv("CHEBI:10102", "KEGG COMPOUND accession")
    assert res == ['C07484']

    try:
        res = ch.conv("CHEBI:10102", "wrong db")
        assert False
    except:
        assert True

    ch.getOntologyChildren("CHEBI:27732")
    ch.getOntologyParents("CHEBI:27732")
    ch.getUpdatedPolymer("CHEBI:27732")