Esempio n. 1
0
def bllip_parse_bioc():
    global rrp
    if request.method == 'GET':
        text = str(request.args.get('text'))
    elif request.method == 'POST':
        text = str(request.get_data())

    collection = bioc.fromstring(text)
    collection.clear_infons();
    collection.infons['tool'] = 'Bllip';
    collection.infons['process'] = 'parse';
    parse_bioc(rrp, collection)
    return collection.tobioc()
Esempio n. 2
0
    parser.add_argument("-v", "--verbose", action="store_true", help="print debug information")
    args = parser.parse_args()

    if args.verbose:
        logging.basicConfig(level=logging.DEBUG)

    if not os.path.isfile(args.input):
        sys.stderr.write('Cannot find input file: %s\n' % args.input)
        sys.exit(2)

    logging.info('Input file: %s' % args.input)
    logging.info('Output file: %s' % args.output)
    return args.input, args.output


if __name__ == "__main__":
    inputfilename, outputfilename = parse_argv()

    model_dir = init_model()
    logging.info('loading model %s ...' % model_dir)
    rrp = RerankingParser.from_unified_model_dir(model_dir)

    collection = parse(inputfilename)
    collection.clear_infons()
    collection.infons['tool'] = 'Bllip'
    collection.infons['process'] = 'parse'

    parse_bioc(rrp, collection)

    collection.tobiocfile(outputfilename)