Esempio n. 1
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def test_tuple_ml():
    """
    Test ML parameter estimation under the tuple distribution.
    """

    from cargo.numpy import tolist_deeply

    model = Tuple([(Binomial(estimation_n=1), 2),
                   (Binomial(estimation_n=1), 1)])
    engine = ModelEngine(model)

    assert_almost_equal_deep(
        tolist_deeply(
            engine.ml(
                [([0, 1], [0])] * 2500 + [([1, 0], [1])] * 7500,
                numpy.ones(10000),
            ), ),
        ([(0.75, 1), (0.25, 1)], [(0.75, 1)]),
    )
    assert_almost_equal_deep(
        tolist_deeply(
            engine.ml(
                [([0, 1], [0])] * 1000 + [([1, 0], [1])] * 1000,
                [1.00] * 1000 + [3.00] * 1000,
            ), ),
        ([(0.75, 1), (0.25, 1)], [(0.75, 1)]),
    )
Esempio n. 2
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def test_tuple_ml():
    """
    Test ML parameter estimation under the tuple distribution.
    """

    from cargo.numpy import tolist_deeply

    model  = Tuple([(Binomial(estimation_n = 1), 2), (Binomial(estimation_n = 1), 1)])
    engine = ModelEngine(model)

    assert_almost_equal_deep(
        tolist_deeply(
            engine.ml(
                [([0, 1], [0])] * 2500 + [([1, 0], [1])] * 7500,
                numpy.ones(10000),
                ),
            ),
        ([(0.75, 1), (0.25, 1)], [(0.75, 1)]),
        )
    assert_almost_equal_deep(
        tolist_deeply(
            engine.ml(
                [([0, 1], [0])] * 1000 + [([1, 0], [1])] * 1000,
                [1.00] * 1000 + [3.00] * 1000,
                ),
            ),
        ([(0.75, 1), (0.25, 1)], [(0.75, 1)]),
        )
Esempio n. 3
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def test_mixed_binomial_ml():
    """
    Test max-likelihood estimation under the mixed binomial distribution.
    """

    me = ModelEngine(MixedBinomial())

    assert_almost_equal_deep(
        me.ml(
            [[(1, 2), (4, 5)], [(3, 4), (8, 8)]],
            numpy.ones((2, 2)),
        ),
        [5.0 / 7.0, 11.0 / 12.0],
    )
Esempio n. 4
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def test_mixed_binomial_ml():
    """
    Test max-likelihood estimation under the mixed binomial distribution.
    """

    me = ModelEngine(MixedBinomial())

    assert_almost_equal_deep(
        me.ml(
            [[(1, 2), (4, 5)],
             [(3, 4), (8, 8)]],
            numpy.ones((2, 2)),
            ),
        [5.0 / 7.0, 11.0 / 12.0],
        )
Esempio n. 5
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def test_binomial_ml():
    """
    Test max-likelihood estimation under the binomial distribution.
    """

    me = ModelEngine(Binomial(estimation_n=2))

    assert_almost_equal_deep(
        me.ml(
            [[1, 2],
             [2, 0]],
            numpy.ones((2, 2)),
            ) \
            .tolist(),
        [(0.75, 2), (0.50, 2)],
        )
Esempio n. 6
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def test_binomial_ml():
    """
    Test max-likelihood estimation under the binomial distribution.
    """

    me = ModelEngine(Binomial(estimation_n = 2))

    assert_almost_equal_deep(
        me.ml(
            [[1, 2],
             [2, 0]],
            numpy.ones((2, 2)),
            ) \
            .tolist(),
        [(0.75, 2), (0.50, 2)],
        )