def isotype_page(isotype_name):
page_title = isotype_name
page_type = "isotype"
obj = isotype_name
rec = list(strain.filter(strain.isotype == isotype_name)
.order_by(strain.latitude).dicts().execute())
ref_strain = [x for x in rec if x["reference_strain"] == True][0]
strain_json_output = json.dumps([x for x in rec if x["latitude"] != None], default=json_serial)
return render_template('strain.html', **locals())
def resolve_strain_isotype(q):
try:
return strain.get(strain.strain == q)
except:
try:
return strain.get(strain.isotype == q)
except:
strain_name = list(
strain.filter(
(strain.previous_names.regexp("^(" + q + ")\|"))
| (strain.previous_names.regexp("\|(" + q + ")$"))
| (strain.previous_names.regexp("\|(" + q + ")\|"))
| (strain.previous_names == q)
).execute()
)
if len(strain_name) > 0:
return strain_name[0]
else:
return None