def test_write_read(self):
read = READ_HEADER.copy()
read.update(READ_DATA)
write_read(self.output_file, read)
file_pos = self.output_file.tell()
self.assertTrue(file_pos % 8 == 0)
self.output_file.seek(0)
num_flows = len(read['flowgram_values'])
observed = parse_read(self.output_file)
self.assertEqual(observed, read)
file_pos = self.output_file.tell()
self.assertTrue(file_pos % 8 == 0)
def test_write_read(self):
read = READ_HEADER.copy()
read.update(READ_DATA)
write_read(self.output_file, read)
file_pos = self.output_file.tell()
self.assertTrue(file_pos % 8 == 0)
self.output_file.seek(0)
num_flows = len(read['flowgram_values'])
observed = parse_read(self.output_file)
self.assertEqual(observed, read)
file_pos = self.output_file.tell()
self.assertTrue(file_pos % 8 == 0)
def test_parse_read(self):
self.sff_file.seek(440)
observed = parse_read(self.sff_file, 400)
expected = dict(READ_HEADER.items() + READ_DATA.items())
self.assertEqual(observed, expected)
def test_parse_read(self):
self.sff_file.seek(440)
observed = parse_read(self.sff_file, 400)
expected = dict(READ_HEADER.items() + READ_DATA.items())
self.assertEqual(observed, expected)