def __init__(self,complex_id, antigen, antibody):
TriangleComplex.__init__(self, complex_id, antigen,antibody)
init_split_cylinder_util(self)
init_complex_axial_plane_util(self)
self.set_axial_plane()
params =[
dict(name="antigen,triangle",
bases=self.triangles,
targets=[(0,self.triangles),(50,self.atb.residues)]),
dict( name="antigen,residue",
bases=self.triangles,
targets = [(0,self.atg.residues),(50,self.atb.residues)]),
dict( name="antigen,combined",
bases=self.triangles,
targets = [(0,self.triangles),(50,self.atg.residues),(100,self.atb.residues)]),
dict(name="antibody,triangle",
bases=self.atb.residues,
targets=[(0,self.triangles),(50,self.atb.residues)]),
dict( name="antibody,residue",
bases=self.atb.residues,
targets = [(0,self.atg.residues),(50,self.atb.residues)]),
dict( name="antibody,combined",
bases=self.atb.residues,
targets = [(0,self.triangles),(50,self.atg.residues),(100,self.atb.residues)])
]
#delay and force, lazy computing
self.delay = map(lambda (x): (False,x), params)
def force(n):
try:
mark,other = self.delay[n-1]
except IndexError:
print "unknown fp id"
return None
if mark:#in cache
print "hit cache",n
return other
else:
fp = self.get_fp_generic(**other)
self.delay[n-1] = (True,fp)
return fp
self.nth_fp = force
def __init__(self,antigen,antibody):
TriangleComplex.__init__(self,antigen,antibody)
self.bitlength = 105
self.fp = BaseComplexFingerprint()
self.distcache = FP105DistCache()