class Test_mol_res_spin(TestCase):
"""Unit tests for the data.mol_res_spin relax module."""
def setUp(self):
"""Create a mol-res-spin structure for testing all the object methods."""
# The initial empty structure.
self.mol = MoleculeList()
# Add a test object to the first molecule, first residue, first spin.
self.mol[0].res[0].spin[0].x = 1
def test_add_mol(self):
"""Unit test for the 'add_item()' method of the MolecularList class."""
# The name of the new molecule.
name = 'Ap4Aase'
# Add a molecule.
self.mol.add_item(mol_name=name)
# Test that the molecule exists.
self.assertEqual(self.mol[1].name, name)
# Test that the molecule's single spin system container does not have the object 'x'.
self.assert_(not hasattr(self.mol[1].res[0].spin[0], 'x'))
def test_add_res(self):
"""Unit test for the 'add_item()' method of the ResidueList class."""
# The name and number of the new residue.
name = 'LEU'
num = -5
# Add the residue.
self.mol[0].res.add_item(res_name=name, res_num=num)
# Test that the residue exists.
self.assertEqual(self.mol[0].res[1].name, name)
self.assertEqual(self.mol[0].res[1].num, num)
# Test that the residues' single spin system container does not have the object 'x'.
self.assert_(not hasattr(self.mol[0].res[1].spin[0], 'x'))
def test_add_spin(self):
"""Unit test for the 'add_item()' method of the SpinList class."""
# The name and number of the new spin.
name = 'N'
num = 1409
# Add the spin.
self.mol[0].res[0].spin.add_item(spin_name=name, spin_num=num, select=0)
# Test that the spin exists.
self.assertEqual(self.mol[0].res[0].spin[1].name, name)
self.assertEqual(self.mol[0].res[0].spin[1].num, num)
self.assertEqual(self.mol[0].res[0].spin[1].select, 0)
# Test that the spin system container does not have the object 'x'.
self.assert_(not hasattr(self.mol[0].res[0].spin[1], 'x'))
def test_mol_container_repr(self):
"""Unit test for the validity of the MoleculeContainer.__repr__() method."""
# Test that __repr__() returns a string.
self.assert_(type(self.mol[0].__repr__()), str)
def test_mol_list_repr(self):
"""Unit test for the validity of the MoleculeList.__repr__() method."""
# Test that __repr__() returns a string.
self.assert_(type(self.mol.__repr__()), str)
def test_res_container_repr(self):
"""Unit test for the validity of the ResidueContainer.__repr__() method."""
# Test that __repr__() returns a string.
self.assert_(type(self.mol[0].res[0].__repr__()), str)
def test_res_list_repr(self):
"""Unit test for the validity of the ResidueList.__repr__() method."""
# Test that __repr__() returns a string.
self.assert_(type(self.mol[0].res.__repr__()), str)
def test_spin_container_repr(self):
"""Unit test for the validity of the SpinContainer.__repr__() method."""
# Test that __repr__() returns a string.
self.assert_(type(self.mol[0].res[0].spin[0].__repr__()), str)
def test_spin_list_repr(self):
"""Unit test for the validity of the SpinList.__repr__() method."""
# Test that __repr__() returns a string.
self.assert_(type(self.mol[0].res[0].spin.__repr__()), str)
class Test_mol_res_spin(TestCase):
"""Unit tests for the data.mol_res_spin relax module."""
def setUp(self):
"""Create a mol-res-spin structure for testing all the object methods."""
# The initial empty structure.
self.mol = MoleculeList()
# Add a test object to the first molecule, first residue, first spin.
self.mol[0].res[0].spin[0].x = 1
def test_add_mol(self):
"""Unit test for the 'add_item()' method of the MolecularList class."""
# The name of the new molecule.
name = 'Ap4Aase'
# Add a molecule.
self.mol.add_item(mol_name=name)
# Test that the molecule exists.
self.assertEqual(self.mol[1].name, name)
# Test that the molecule's single spin system container does not have the object 'x'.
self.assert_(not hasattr(self.mol[1].res[0].spin[0], 'x'))
def test_add_res(self):
"""Unit test for the 'add_item()' method of the ResidueList class."""
# The name and number of the new residue.
name = 'LEU'
num = -5
# Add the residue.
self.mol[0].res.add_item(res_name=name, res_num=num)
# Test that the residue exists.
self.assertEqual(self.mol[0].res[1].name, name)
self.assertEqual(self.mol[0].res[1].num, num)
# Test that the residues' single spin system container does not have the object 'x'.
self.assert_(not hasattr(self.mol[0].res[1].spin[0], 'x'))
def test_add_spin(self):
"""Unit test for the 'add_item()' method of the SpinList class."""
# The name and number of the new spin.
name = 'N'
num = 1409
# Add the spin.
self.mol[0].res[0].spin.add_item(spin_name=name, spin_num=num, select=0)
# Test that the spin exists.
self.assertEqual(self.mol[0].res[0].spin[1].name, name)
self.assertEqual(self.mol[0].res[0].spin[1].num, num)
self.assertEqual(self.mol[0].res[0].spin[1].select, 0)
# Test that the spin system container does not have the object 'x'.
self.assert_(not hasattr(self.mol[0].res[0].spin[1], 'x'))
def test_mol_container_repr(self):
"""Unit test for the validity of the MoleculeContainer.__repr__() method."""
# Test that __repr__() returns a string.
self.assert_(type(self.mol[0].__repr__()), str)
def test_mol_list_repr(self):
"""Unit test for the validity of the MoleculeList.__repr__() method."""
# Test that __repr__() returns a string.
self.assert_(type(self.mol.__repr__()), str)
def test_res_container_repr(self):
"""Unit test for the validity of the ResidueContainer.__repr__() method."""
# Test that __repr__() returns a string.
self.assert_(type(self.mol[0].res[0].__repr__()), str)
def test_res_list_repr(self):
"""Unit test for the validity of the ResidueList.__repr__() method."""
# Test that __repr__() returns a string.
self.assert_(type(self.mol[0].res.__repr__()), str)
def test_spin_container_repr(self):
"""Unit test for the validity of the SpinContainer.__repr__() method."""
# Test that __repr__() returns a string.
self.assert_(type(self.mol[0].res[0].spin[0].__repr__()), str)
def test_spin_list_repr(self):
"""Unit test for the validity of the SpinList.__repr__() method."""
# Test that __repr__() returns a string.
self.assert_(type(self.mol[0].res[0].spin.__repr__()), str)
