def test_woffles(query, expected):
dc = Datacube(app='test_wofls')
bands = ['blue', 'green', 'red', 'nir', 'swir1', 'swir2'] # inputs needed from EO data)
source = dc.load(product='ls8_nbar_albers', measurements=bands, **query)
pq = dc.load(product='ls8_pq_albers', like=source)
dsm = dc.load(product='dsm1sv10', like=source, time=('1900-01-01', '2100-01-01'), resampling='cubic')
wofls_output = woffles(*(x.isel(time=0) for x in [source, pq, dsm]))
assert (wofls_output == expected).all()
def post_processing(predicted):
"""
filter prediction results with post processing filters.
Simplified from production code to skip
segmentation, probability, and mode calcs
"""
dc = Datacube(app='whatever')
predict = predicted.Predictions
#--Post process masking---------------------------------------------------------------
#print(" masking with AEZ,WDPA,WOfS,slope & elevation")
# mask out classification beyond AEZ boundary
gdf = gpd.read_file('data/Sahel.geojson')
with HiddenPrints():
mask = xr_rasterize(gdf, predicted)
predict = predict.where(mask, 0)
# mask with WDPA
# url_wdpa="s3://deafrica-input-datasets/protected_areas/WDPA_southern.tif"
# wdpa=rio_slurp_xarray(url_wdpa, gbox=predicted.geobox)
# wdpa = wdpa.astype(bool)
# predict = predict.where(~wdpa, 0)
#mask with WOFS
wofs = dc.load(product='wofs_ls_summary_annual',
like=predicted.geobox,
time=('2019'))
wofs = wofs.frequency > 0.2 # threshold
predict = predict.where(~wofs, 0)
#mask steep slopes
url_slope = "https://deafrica-input-datasets.s3.af-south-1.amazonaws.com/srtm_dem/srtm_africa_slope.tif"
slope = rio_slurp_xarray(url_slope, gbox=predicted.geobox)
slope = slope > 50
predict = predict.where(~slope, 0)
#mask where the elevation is above 3600m
elevation = dc.load(product='dem_srtm', like=predicted.geobox)
elevation = elevation.elevation > 3600 # threshold
predict = predict.where(~elevation.squeeze(), 0)
#set dtype
predict = predict.astype(np.int8)
return predict
def post_processing(
predicted: xr.Dataset,
) -> xr.DataArray:
"""
filter prediction results with post processing filters.
:param predicted: The prediction results
"""
dc = Datacube(app='whatever')
#grab predictions and proba for post process filtering
predict=predicted.Predictions
# mask out classification beyond AEZ boundary
gdf = gpd.read_file('data/Western.geojson')
with HiddenPrints():
mask = xr_rasterize(gdf, predicted)
predict = predict.where(mask,0)
# mask with WDPA
url_wdpa="s3://deafrica-input-datasets/protected_areas/WDPA_western.tif"
wdpa=rio_slurp_xarray(url_wdpa, gbox=predicted.geobox)
wdpa = wdpa.astype(bool)
predict = predict.where(~wdpa, 0)
#mask with WOFS
wofs=dc.load(product='ga_ls8c_wofs_2_summary',like=predicted.geobox)
wofs=wofs.frequency > 0.2 # threshold
predict=predict.where(~wofs, 0)
#mask steep slopes
url_slope="https://deafrica-data.s3.amazonaws.com/ancillary/dem-derivatives/cog_slope_africa.tif"
slope=rio_slurp_xarray(url_slope, gbox=predicted.geobox)
slope=slope > 35
predict=predict.where(~slope, 0)
#mask where the elevation is above 3600m
elevation=dc.load(product='dem_srtm', like=predicted.geobox)
elevation=elevation.elevation > 3600 # threshold
predict=predict.where(~elevation.squeeze(), 0)
#set dtype
predict=predict.astype(np.int8)
return predict
def calculate_index_task(params):
item = params.get('item')
index = params.get('index', 'rgb')
dc = Datacube(config="datacube.conf")
product = "ls8_level1_usgs"
x = (item["bbox"][0], item["bbox"][2])
y = (item["bbox"][1], item["bbox"][3])
time = item["properties"]["datetime"].split("T")[0]
measurements = ["band_2", "band_3", "band_4"]
query = {
'x': x,
'y': y,
'time': time,
'measurements': ['nbart_red', 'nbart_green', 'nbart_blue'],
'output_crs': 'EPSG:4326',
'resolution': (-0.001, 0.001),
}
ds = dc.load(product=product, **query)
print(ds)
rgb_da = ds.to_array()
suffix = 'rgb'
filename = f'{item["id"]}_{suffix}.tif'
path = config.STATIC_DIR / filename
write_cog(geo_im=rgb_da, fname='rgb.tif', overwrite=True)
return {"success": True, "url": str(path)}
def xadataset_from_odcdataset(datasets: Union[List[ODCDataset],
ODCDataset] = None,
ids: Union[List[UUID], UUID] = None,
measurements: List[str] = None) -> xa.Dataset:
""" Loads a xaDataset from ODCDatasets or ODCDataset ids
:param datasets: ODCDataset(s), optional
:param ids: ODCDataset id(s), optional
:param measurements: list of measurements/bands to load, optional
:return: xa.Dataset containing given ODCDatasets or IDs """
dc = Datacube(app="dataset_from_ODCDataset")
if not datasets:
if not isinstance(ids, list):
ids = [ids]
datasets = [dc.index.datasets.get(id_) for id_ in ids]
if not isinstance(datasets, list):
datasets = [datasets]
product_name = datasets[0].metadata_doc["product"]["name"]
crs = datasets[0].crs
res = (10, -10) # TODO: handle other resolutions
ds = dc.load(product=product_name,
dask_chunks={},
measurements=measurements,
output_crs=str(crs),
resolution=res,
datasets=datasets)
return ds
def post_processing(
data: xr.Dataset,
predicted: xr.Dataset,
config: FeaturePathConfig,
geobox_used: GeoBox,
) -> xr.DataArray:
"""
filter prediction results with post processing filters.
:param data: raw data with all features to run prediction
:param predicted: The prediction results
:param config: FeaturePathConfig configureation
:param geobox_used: Geobox used to generate the prediciton feature
:return: only predicted binary class label
"""
# post prediction filtering
predict = predicted.Predictions
query = config.query.copy()
# Update dc query with geometry
# geobox_used = self.geobox_dict[(x, y)]
query["geopolygon"] = Geometry(geobox_used.extent.geom,
crs=geobox_used.crs)
dc = Datacube(app=__name__)
# mask with WOFS
# wofs_query = query.pop("measurements")
wofs = dc.load(product="ga_ls8c_wofs_2_summary", **query)
wofs = wofs.frequency > 0.2 # threshold
predict = predict.where(~wofs, 0)
# mask steep slopes
slope = data.slope > 35
predict = predict.where(~slope, 0)
# mask where the elevation is above 3600m
query.pop("time")
elevation = dc.load(product="srtm", **query)
elevation = elevation.elevation > 3600
predict = predict.where(~elevation.squeeze(), 0)
return predict
def rgb_task2(item):
dc = Datacube(config="datacube.conf")
product = "ls8_level1_usgs"
time = item["properties"]["datetime"].split("T")[0]
x = (item["bbox"][0], item["bbox"][2])
y = (item["bbox"][1], item["bbox"][3])
measurements = ["B2"]
ds = dc.load(product=product,
measurements=measurements,
time=time,
x=x,
y=y,
output_crs='EPSG:4326',
resolution=(-0.001, 0.001))
suffix = '_'.join(measurements)
filename = f'{item["id"]}_{suffix}.tif'
path = write_cog(
ds.to_array(),
Path('/static') / filename,
)
return {"success": True, "url": str(path)}
def cli(product, input_prefix, location, verbose):
"""
Generate mosaic overviews of the stats data.
An intermediate cache file is generated and stored in the output location
during this process.
Note: The input bucket must be public otherwise the data can not be listed.
"""
product = product_from_yaml(product)
if verbose:
print(f"Preparing mosaics for {product.name} product")
dss = s3_fetch_dss(input_prefix, product, glob="*.json")
cache = create_cache(f"{product.name}.db")
if verbose:
print(f"Writing {location}/{product.name}.db")
cache = create_cache(f"{location}/{product.name}.db")
cache.bulk_save(dss)
if verbose:
print(f"Found {cache.count:,d} datasets")
dc = Datacube()
dss = list(cache.get_all())
xx = dc.load(
datasets=dss,
dask_chunks={
"x": 3200,
"y": 3200
},
resolution=(-120, 120),
measurements=["red", "green", "blue"],
)
save(xx, location, product.name, verbose)
def post_processing(predicted):
"""
filter prediction results with post processing filters.
:param predicted: The prediction results
"""
dc = Datacube(app='whatever')
# grab predictions and proba for post process filtering
predict = predicted.Predictions
# proba = predicted.Probabilities
# proba = proba.where(predict == 1, 100 - proba) # crop proba only
# #------image seg and filtering -------------
# # write out ndvi for image seg
# ndvi = assign_crs(predicted[["NDVI_S1", "NDVI_S2"]],
# crs=predicted.geobox.crs)
# # call function with dask delayed
# filtered = image_segmentation(ndvi, predict)
# # convert delayed object to dask array
# filtered = dask.array.from_delayed(filtered.squeeze(),
# shape=predict.shape,
# dtype=np.int8)
# # convert dask array to xr.Datarray
# filtered = xr.DataArray(filtered,
# coords=predict.coords,
# attrs=predict.attrs)
# --Post process masking------------------------------------------------
# merge back together for masking
ds = xr.Dataset({"mask":
predict}) #, "prob": proba, "filtered": filtered})
# mask out classification beyond AEZ boundary
gdf = gpd.read_file(
'https://github.com/digitalearthafrica/crop-mask/blob/main/testing/eastern_cropmask/data/Eastern.geojson?raw=true'
)
with HiddenPrints():
mask = xr_rasterize(gdf, predicted)
mask = mask.chunk({})
ds = ds.where(mask, 0)
# mask with WDPA
wdpa = rio_slurp_xarray(
"s3://deafrica-input-datasets/protected_areas/WDPA_eastern.tif",
gbox=predicted.geobox)
wdpa = wdpa.chunk({})
wdpa = wdpa.astype(bool)
ds = ds.where(~wdpa, 0)
# mask with WOFS
wofs = dc.load(product="ga_ls8c_wofs_2_summary",
like=predicted.geobox,
dask_chunks={})
wofs = wofs.frequency > 0.2 # threshold
ds = ds.where(~wofs, 0)
# mask steep slopes
slope = rio_slurp_xarray(
'https://deafrica-data.s3.amazonaws.com/ancillary/dem-derivatives/cog_slope_africa.tif',
gbox=predicted.geobox)
slope = slope.chunk({})
slope = slope > 35
ds = ds.where(~slope, 0)
# mask where the elevation is above 3600m
elevation = dc.load(product="dem_srtm",
like=predicted.geobox,
dask_chunks={})
elevation = elevation.elevation > 3600 # threshold
ds = ds.where(~elevation.squeeze(), 0)
return ds.squeeze()
def create_mosaic(
dc: Datacube,
product: str,
out_product: str,
time: Tuple[str, str],
time_str: str,
bands: Tuple[str],
s3_output_root: str,
split_bands: bool = False,
resolution: int = 120,
overwrite: bool = False,
):
log = setup_logging()
log.info(f"Creating mosaic for {product} over {time}")
client = start_local_dask()
assets = {}
data = dc.load(
product=product,
time=time,
resolution=(-resolution, resolution),
dask_chunks={"x": 2048, "y": 2048},
measurements=bands,
)
# This is a bad idea, we run out of memory
# data.persist()
if not split_bands:
log.info("Creating a single tif file")
out_file = _get_path(s3_output_root, out_product, time_str, "tif")
exists = s3_head_object(out_file) is not None
skip_writing = not (not exists or overwrite)
try:
asset, _ = _save_opinionated_cog(
data,
out_file,
skip_writing=skip_writing,
)
except ValueError:
log.exception(
"Failed to create COG, please check that you only have one timestep in the period."
)
exit(1)
assets[bands[0]] = asset
if skip_writing:
log.info(f"File exists, and overwrite is False. Not writing {out_file}")
else:
log.info(f"Finished writing: {asset.href}")
else:
log.info("Creating multiple tif files")
for band in bands:
out_file = _get_path(
s3_output_root, out_product, time_str, "tif", band=band
)
exists = s3_head_object(out_file) is not None
skip_writing = not (not exists or overwrite)
try:
asset, band = _save_opinionated_cog(
data=data,
out_file=out_file,
band=band,
skip_writing=skip_writing,
)
except ValueError:
log.exception(
"Failed to create COG, please check that you only have one timestep in the period."
)
exit(1)
assets[band] = asset
if skip_writing:
log.info(f"File exists, and overwrite is False. Not writing {out_file}")
else:
log.info(f"Finished writing: {asset.href}")
# Aggressively heavy handed, but we get memory leaks otherwise
client.restart()
out_stac_file = _get_path(s3_output_root, out_product, time_str, "stac-item.json")
item = create_stac_item(
assets[bands[0]].href,
id=f"{product}_{time_str}",
assets=assets,
with_proj=True,
properties={
"odc:product": out_product,
"start_datetime": f"{time[0]}T00:00:00Z",
"end_datetime": f"{time[1]}T23:59:59Z",
},
)
item.set_self_href(out_stac_file)
log.info(f"Writing STAC: {out_stac_file}")
client = s3_client(aws_unsigned=False)
s3_dump(
data=json.dumps(item.to_dict(), indent=2),
url=item.self_href,
ACL="bucket-owner-full-control",
ContentType="application/json",
s3=client,
)
def get_data_opensource_shapefile(prod_info, acq_min, acq_max, shapefile,
no_partial_scenes):
datacube_config = prod_info[0]
source_prod = prod_info[1]
source_band_list = prod_info[2]
mask_band = prod_info[3]
if datacube_config != 'default':
remotedc = Datacube(config=datacube_config)
else:
remotedc = Datacube()
with warnings.catch_warnings():
warnings.simplefilter("ignore")
with fiona.open(shapefile) as shapes:
crs = geometry.CRS(shapes.crs_wkt)
first_geometry = next(iter(shapes))['geometry']
geom = geometry.Geometry(first_geometry, crs=crs)
return_data = {}
data = xr.Dataset()
if source_prod != '':
# get a sample dataset to decide the target epsg
fd_query = {'time': (acq_min, acq_max), 'geopolygon': geom}
sample_fd_ds = remotedc.find_datasets(product=source_prod,
group_by='solar_day',
**fd_query)
if (len(sample_fd_ds)) > 0:
# decidce pixel size for output data
pixel_x, pixel_y = get_pixel_size(sample_fd_ds[0],
source_band_list)
log.info(
'Output pixel size for product {}: x={}, y={}'.format(
source_prod, pixel_x, pixel_y))
# get target epsg from metadata
target_epsg = get_epsg(sample_fd_ds[0])
log.info('CRS for product {}: {}'.format(
source_prod, target_epsg))
query = {
'time': (acq_min, acq_max),
'geopolygon': geom,
'output_crs': target_epsg,
'resolution': (-pixel_y, pixel_x),
'measurements': source_band_list
}
if 's2' in source_prod:
data = remotedc.load(product=source_prod,
group_by='solar_day',
**query)
else:
data = remotedc.load(product=source_prod,
align=(pixel_x / 2.0,
pixel_y / 2.0),
group_by='solar_day',
**query)
# remove cloud and nodta
data = remove_cloud_nodata(source_prod, data, mask_band)
if data.data_vars:
mask = geometry_mask([geom], data.geobox, invert=True)
data = data.where(mask)
if no_partial_scenes:
# calculate valid data percentage
data = only_return_whole_scene(data)
return_data = {
source_prod: {
'data': data,
'mask_band': mask_band,
'find_list': sample_fd_ds
}
}
return return_data
def get_data_opensource(prod_info, input_lon, input_lat, acq_min, acq_max,
window_size, no_partial_scenes):
datacube_config = prod_info[0]
source_prod = prod_info[1]
source_band_list = prod_info[2]
mask_band = prod_info[3]
with warnings.catch_warnings():
warnings.simplefilter("ignore")
if datacube_config != 'default':
remotedc = Datacube(config=datacube_config)
else:
remotedc = Datacube()
return_data = {}
data = xr.Dataset()
if source_prod != '':
# find dataset to get metadata
fd_query = {
'time': (acq_min, acq_max),
'x': (input_lon, input_lon + window_size / 100000),
'y': (input_lat, input_lat + window_size / 100000),
}
sample_fd_ds = remotedc.find_datasets(product=source_prod,
group_by='solar_day',
**fd_query)
if (len(sample_fd_ds)) > 0:
# decidce pixel size for output data
pixel_x, pixel_y = get_pixel_size(sample_fd_ds[0],
source_band_list)
log.info('Output pixel size for product {}: x={}, y={}'.format(
source_prod, pixel_x, pixel_y))
# get target epsg from metadata
target_epsg = get_epsg(sample_fd_ds[0])
log.info('CRS for product {}: {}'.format(
source_prod, target_epsg))
x1, y1, x2, y2 = setQueryExtent(target_epsg, input_lon,
input_lat, window_size)
query = {
'time': (acq_min, acq_max),
'x': (x1, x2),
'y': (y1, y2),
'crs': target_epsg,
'output_crs': target_epsg,
'resolution': (-pixel_y, pixel_x),
'measurements': source_band_list
}
if 's2' in source_prod:
data = remotedc.load(product=source_prod,
group_by='solar_day',
**query)
else:
data = remotedc.load(product=source_prod,
align=(pixel_x / 2.0, pixel_y / 2.0),
group_by='solar_day',
**query)
# remove cloud and nodta
data = remove_cloud_nodata(source_prod, data, mask_band)
if no_partial_scenes:
# calculate valid data percentage
data = only_return_whole_scene(data)
return_data = {
source_prod: {
'data': data,
'mask_band': mask_band,
'find_list': sample_fd_ds
}
}
return return_data
def FindOutHowFullTheDamIs(shapes, crs):
"""
This is where the code processing is actually done. This code takes in a polygon, and the
shapefile's crs and performs a polygon drill into the wofs_albers product. The resulting
xarray, which contains the water classified pixels for that polygon over every available
timestep, is used to calculate the percentage of the water body that is wet at each time step.
The outputs are written to a csv file named using the polygon ID.
Inputs:
shapes - polygon to be interrogated
crs - crs of the shapefile
Outputs:
True or False - False if something unexpected happened, so the function can be run again.
a csv file on disk is appended for every valid polygon.
"""
dc = Datacube(app='Polygon drill')
first_geometry = shapes['geometry']
if 'ID' in shapes['properties'].keys():
polyName = shapes['properties']['ID']
else:
polyName = shapes['properties']['FID']
strPolyName = str(polyName).zfill(6)
fpath = os.path.join(output_dir, f'{strPolyName[0:4]}/{strPolyName}.csv')
# start_date = get_last_date(fpath)
start_date = '2021-05-01'
if start_date is None:
time_period = ('2021-03-01', current_time.strftime('%Y-%m-%d'))
# print(f'There is no csv for {strPolyName}')
# return 1
else:
time_period = ('2021-03-01', current_time.strftime('%Y-%m-%d'))
geom = geometry.Geometry(first_geometry, crs=crs)
## Set up the query, and load in all of the WOFS layers
query = {'geopolygon': geom, 'time': time_period}
# WOFL = dc.load(product='wofs_albers', **query)
WOFL = dc.load(product='wofs_albers',
group_by='solar_day',
fuse_func=wofls_fuser,
**query)
if len(WOFL.attrs) == 0:
print(f'There is no new data for {strPolyName}')
return 2
# Make a mask based on the polygon (to remove extra data outside of the polygon)
mask = rasterio.features.geometry_mask(
[geom.to_crs(WOFL.geobox.crs) for geoms in [geom]],
out_shape=WOFL.geobox.shape,
transform=WOFL.geobox.affine,
all_touched=False,
invert=True)
wofl_masked = WOFL.water.where(mask)
## Work out how full the dam is at every time step
DamCapacityPc = []
DamCapacityCt = []
LSA_WetPc = []
DryObserved = []
InvalidObservations = []
for ix, times in enumerate(WOFL.time):
# Grab the data for our timestep
AllTheBitFlags = wofl_masked.isel(time=ix)
# Find all the wet/dry pixels for that timestep
LSA_Wet = AllTheBitFlags.where(
AllTheBitFlags == 136).count().item()
LSA_Dry = AllTheBitFlags.where(AllTheBitFlags == 8).count().item()
WetPixels = AllTheBitFlags.where(
AllTheBitFlags == 128).count().item() + LSA_Wet
DryPixels = AllTheBitFlags.where(
AllTheBitFlags == 0).count().item() + LSA_Dry
# Apply the mask and count the number of observations
MaskedAll = AllTheBitFlags.count().item()
# Turn our counts into percents
try:
WaterPercent = WetPixels / MaskedAll * 100
DryPercent = DryPixels / MaskedAll * 100
UnknownPercent = (MaskedAll -
(WetPixels + DryPixels)) / MaskedAll * 100
LSA_WetPercent = LSA_Wet / MaskedAll * 100
except ZeroDivisionError:
WaterPercent = 0.0
DryPercent = 0.0
UnknownPercent = 100.0
LSA_WetPercent = 0.0
# Append the percentages to a list for each timestep
DamCapacityPc.append(WaterPercent)
InvalidObservations.append(UnknownPercent)
DryObserved.append(DryPercent)
DamCapacityCt.append(WetPixels)
LSA_WetPc.append(LSA_WetPercent)
## Filter out timesteps with less than 90% valid observations
try:
ValidMask = [
i for i, x in enumerate(InvalidObservations) if x < 10
]
if len(ValidMask) > 0:
ValidObs = WOFL.time[ValidMask].dropna(dim='time')
ValidCapacityPc = [DamCapacityPc[i] for i in ValidMask]
ValidCapacityCt = [DamCapacityCt[i] for i in ValidMask]
ValidLSApc = [LSA_WetPc[i] for i in ValidMask]
ValidObs = ValidObs.to_dataframe()
if 'spatial_ref' in ValidObs.columns:
ValidObs = ValidObs.drop(columns=['spatial_ref'])
DateList = ValidObs.to_csv(
None,
header=False,
index=False,
date_format="%Y-%m-%dT%H:%M:%SZ").split('\n')
rows = zip(DateList, ValidCapacityPc, ValidCapacityCt,
ValidLSApc)
if DateList:
strPolyName = str(polyName).zfill(6)
fpath = os.path.join(
output_dir, f'{strPolyName[0:4]}/{strPolyName}.csv')
os.makedirs(os.path.dirname(fpath), exist_ok=True)
with open(fpath, 'w') as f:
writer = csv.writer(f)
Headings = [
'Observation Date', 'Wet pixel percentage',
'Wet pixel count (n = {0})'.format(MaskedAll),
'LSA Wet Pixel Pct'
]
writer.writerow(Headings)
for row in rows:
writer.writerow(row)
else:
print(f'{polyName} has no new good (90percent) valid data')
return 1
except:
print(f'This polygon isn\'t working...: {polyName}')
return 3
def post_processing(
predicted: xr.Dataset, urls: Dict[str, Any]
) -> Tuple[xr.DataArray, xr.DataArray, xr.DataArray]:
"""
Run the delayed post_processing functions, then create a lazy
xr.Dataset to satisfy odc-stats
"""
dc = Datacube(app="whatever")
# grab predictions and proba for post process filtering
predict = predicted.Predictions
proba = predicted.Probabilities
proba = proba.where(predict == 1, 100 - proba) # crop proba only
# ------image seg and filtering -------------
# write out ndvi for image seg
ndvi = assign_crs(predicted[["NDVI_S1", "NDVI_S2"]], crs=predicted.geobox.crs)
# call function with dask delayed
filtered = image_segmentation(ndvi, predict)
# convert delayed object to dask array
filtered = dask.array.from_delayed(
filtered.squeeze(), shape=predict.shape, dtype=np.uint8
)
# convert dask array to xr.Datarray
filtered = xr.DataArray(filtered, coords=predict.coords, attrs=predict.attrs)
# --Post process masking----------------------------------------
# merge back together for masking
ds = xr.Dataset({"mask": predict, "prob": proba, "filtered": filtered})
# mask out classification beyond AEZ boundary
gdf = gpd.read_file(urls["aez"])
with HiddenPrints():
mask = xr_rasterize(gdf, predicted)
mask = mask.chunk({})
ds = ds.where(mask, 0)
# mask with WDPA
wdpa = rio_slurp_xarray(urls["wdpa"], gbox=predicted.geobox)
wdpa = wdpa.chunk({})
wdpa = wdpa.astype(bool)
ds = ds.where(~wdpa, 0)
# mask with WOFS
wofs=dc.load(product='wofs_ls_summary_annual',
like=predicted.geobox,
dask_chunks={},
time=('2019'))
wofs=wofs.frequency > 0.20 # threshold
ds=ds.where(~wofs, 0)
# mask steep slopes
slope = rio_slurp_xarray(urls["slope"], gbox=predicted.geobox)
slope = slope.chunk({})
slope = slope > 50
ds = ds.where(~slope, 0)
# mask where the elevation is above 3600m
elevation = dc.load(product="dem_srtm", like=predicted.geobox, dask_chunks={})
elevation = elevation.elevation > 3600 # threshold
ds = ds.where(~elevation.squeeze(), 0)
return ds.squeeze()
