def test_publish_simple(origin, src_path, dst_path):
# prepare src
source = install(src_path, source=origin, recursive=True)
# forget we cloned it (provide no 'origin' anymore), which should lead to
# setting tracking branch to target:
source.repo.remove_remote("origin")
# create plain git at target:
target = GitRepo(dst_path, create=True)
target.checkout("TMP", ["-b"])
source.repo.add_remote("target", dst_path)
res = publish(dataset=source, to="target", result_xfm='datasets')
eq_(res, [source])
ok_clean_git(source.repo, annex=None)
ok_clean_git(target, annex=None)
eq_(list(target.get_branch_commits("master")),
list(source.repo.get_branch_commits("master")))
# don't fail when doing it again
res = publish(dataset=source, to="target")
# and nothing is pushed
assert_result_count(res, 1, status='notneeded')
ok_clean_git(source.repo, annex=None)
ok_clean_git(target, annex=None)
eq_(list(target.get_branch_commits("master")),
list(source.repo.get_branch_commits("master")))
eq_(list(target.get_branch_commits("git-annex")),
list(source.repo.get_branch_commits("git-annex")))
# 'target/master' should be tracking branch at this point, so
# try publishing without `to`:
# MIH: Nope, we don't automatically add this anymore
# some modification:
with open(opj(src_path, 'test_mod_file'), "w") as f:
f.write("Some additional stuff.")
source.add(opj(src_path, 'test_mod_file'),
to_git=True,
message="Modified.")
ok_clean_git(source.repo, annex=None)
res = publish(dataset=source, to='target', result_xfm='datasets')
eq_(res, [source])
ok_clean_git(dst_path, annex=None)
eq_(list(target.get_branch_commits("master")),
list(source.repo.get_branch_commits("master")))
# Since git-annex 6.20170220, post-receive hook gets triggered
# which results in entry being added for that repo into uuid.log on remote
# end since then finally git-annex senses that it needs to init that remote,
# so it might have 1 more commit than local.
# see https://github.com/datalad/datalad/issues/1319
ok_(
set(source.repo.get_branch_commits("git-annex")).issubset(
set(target.get_branch_commits("git-annex"))))
def test_publish_simple(origin, src_path, dst_path):
# prepare src
source = install(src_path, source=origin, recursive=True)
# forget we cloned it (provide no 'origin' anymore), which should lead to
# setting tracking branch to target:
source.repo.remove_remote("origin")
# create plain git at target:
target = GitRepo(dst_path, create=True)
target.checkout("TMP", ["-b"])
source.repo.add_remote("target", dst_path)
res = publish(dataset=source, to="target", result_xfm='datasets')
eq_(res, [source])
ok_clean_git(source.repo, annex=None)
ok_clean_git(target, annex=None)
eq_(list(target.get_branch_commits("master")),
list(source.repo.get_branch_commits("master")))
# don't fail when doing it again
res = publish(dataset=source, to="target")
# and nothing is pushed
assert_result_count(res, 1, status='notneeded')
ok_clean_git(source.repo, annex=None)
ok_clean_git(target, annex=None)
eq_(list(target.get_branch_commits("master")),
list(source.repo.get_branch_commits("master")))
eq_(list(target.get_branch_commits("git-annex")),
list(source.repo.get_branch_commits("git-annex")))
# 'target/master' should be tracking branch at this point, so
# try publishing without `to`:
# MIH: Nope, we don't automatically add this anymore
# some modification:
with open(opj(src_path, 'test_mod_file'), "w") as f:
f.write("Some additional stuff.")
source.add(opj(src_path, 'test_mod_file'), to_git=True,
message="Modified.")
ok_clean_git(source.repo, annex=None)
res = publish(dataset=source, to='target', result_xfm='datasets')
eq_(res, [source])
ok_clean_git(dst_path, annex=None)
eq_(list(target.get_branch_commits("master")),
list(source.repo.get_branch_commits("master")))
# Since git-annex 6.20170220, post-receive hook gets triggered
# which results in entry being added for that repo into uuid.log on remote
# end since then finally git-annex senses that it needs to init that remote,
# so it might have 1 more commit than local.
# see https://github.com/datalad/datalad/issues/1319
ok_(set(source.repo.get_branch_commits("git-annex")).issubset(
set(target.get_branch_commits("git-annex"))))
def test_publish_plain_git(origin, src_path, dst_path):
# TODO: Since it's mostly the same, melt with test_publish_simple
# prepare src
source = install(src_path, source=origin, recursive=True)
# forget we cloned it (provide no 'origin' anymore), which should lead to
# setting tracking branch to target:
source.repo.remove_remote("origin")
# create plain git at target:
target = GitRepo(dst_path, create=True)
target.checkout("TMP", ["-b"])
source.repo.add_remote("target", dst_path)
res = publish(dataset=source, to="target", result_xfm='datasets')
eq_(res, [source])
ok_clean_git(source.repo, annex=None)
ok_clean_git(target, annex=None)
eq_(list(target.get_branch_commits("master")),
list(source.repo.get_branch_commits("master")))
# don't fail when doing it again
res = publish(dataset=source, to="target")
# and nothing is pushed
assert_result_count(res, 1, status='notneeded')
ok_clean_git(source.repo, annex=None)
ok_clean_git(target, annex=None)
eq_(list(target.get_branch_commits("master")),
list(source.repo.get_branch_commits("master")))
# some modification:
with open(opj(src_path, 'test_mod_file'), "w") as f:
f.write("Some additional stuff.")
source.add(opj(src_path, 'test_mod_file'), to_git=True,
message="Modified.")
ok_clean_git(source.repo, annex=None)
res = publish(dataset=source, to='target', result_xfm='datasets')
eq_(res, [source])
ok_clean_git(dst_path, annex=None)
eq_(list(target.get_branch_commits("master")),
list(source.repo.get_branch_commits("master")))
# amend and change commit msg in order to test for force push:
source.repo.commit("amended", options=['--amend'])
# push should be rejected (non-fast-forward):
assert_raises(IncompleteResultsError,
publish, dataset=source, to='target', result_xfm='datasets')
# push with force=True works:
res = publish(dataset=source, to='target', result_xfm='datasets', force=True)
eq_(res, [source])
def test_publish_simple(origin, src_path, dst_path):
# prepare src
source = install(src_path, source=origin, recursive=True)[0]
# forget we cloned it (provide no 'origin' anymore), which should lead to
# setting tracking branch to target:
source.repo.remove_remote("origin")
# create plain git at target:
target = GitRepo(dst_path, create=True)
target.checkout("TMP", ["-b"])
source.repo.add_remote("target", dst_path)
res = publish(dataset=source, to="target")
eq_(res, ([source], []))
ok_clean_git(src_path, annex=False)
ok_clean_git(dst_path, annex=False)
eq_(list(target.get_branch_commits("master")),
list(source.repo.get_branch_commits("master")))
# don't fail when doing it again
res = publish(dataset=source, to="target")
eq_(res, ([source], []))
ok_clean_git(src_path, annex=False)
ok_clean_git(dst_path, annex=False)
eq_(list(target.get_branch_commits("master")),
list(source.repo.get_branch_commits("master")))
eq_(list(target.get_branch_commits("git-annex")),
list(source.repo.get_branch_commits("git-annex")))
# 'target/master' should be tracking branch at this point, so
# try publishing without `to`:
# some modification:
with open(opj(src_path, 'test_mod_file'), "w") as f:
f.write("Some additional stuff.")
source.repo.add(opj(src_path, 'test_mod_file'),
git=True,
commit=True,
msg="Modified.")
ok_clean_git(src_path, annex=False)
res = publish(dataset=source)
eq_(res, ([source], []))
ok_clean_git(dst_path, annex=False)
eq_(list(target.get_branch_commits("master")),
list(source.repo.get_branch_commits("master")))
eq_(list(target.get_branch_commits("git-annex")),
list(source.repo.get_branch_commits("git-annex")))
def test_publish_simple(origin, src_path, dst_path):
# prepare src
source = install(src_path, source=origin, recursive=True)[0]
# forget we cloned it (provide no 'origin' anymore), which should lead to
# setting tracking branch to target:
source.repo.remove_remote("origin")
# create plain git at target:
target = GitRepo(dst_path, create=True)
target.checkout("TMP", ["-b"])
source.repo.add_remote("target", dst_path)
res = publish(dataset=source, to="target")
eq_(res, ([source], []))
ok_clean_git(src_path, annex=False)
ok_clean_git(dst_path, annex=False)
eq_(list(target.get_branch_commits("master")),
list(source.repo.get_branch_commits("master")))
# don't fail when doing it again
res = publish(dataset=source, to="target")
eq_(res, ([source], []))
ok_clean_git(src_path, annex=False)
ok_clean_git(dst_path, annex=False)
eq_(list(target.get_branch_commits("master")),
list(source.repo.get_branch_commits("master")))
eq_(list(target.get_branch_commits("git-annex")),
list(source.repo.get_branch_commits("git-annex")))
# 'target/master' should be tracking branch at this point, so
# try publishing without `to`:
# some modification:
with open(opj(src_path, 'test_mod_file'), "w") as f:
f.write("Some additional stuff.")
source.repo.add(opj(src_path, 'test_mod_file'), git=True,
commit=True, msg="Modified.")
ok_clean_git(src_path, annex=False)
res = publish(dataset=source)
eq_(res, ([source], []))
ok_clean_git(dst_path, annex=False)
eq_(list(target.get_branch_commits("master")),
list(source.repo.get_branch_commits("master")))
eq_(list(target.get_branch_commits("git-annex")),
list(source.repo.get_branch_commits("git-annex")))
def test_GitRepo_git_get_branch_commits(src):
repo = GitRepo(src, create=True)
with open(op.join(src, 'file.txt'), 'w') as f:
f.write('load')
repo.add('*')
repo.commit('committing')
commits_default = list(repo.get_branch_commits())
commits = list(repo.get_branch_commits('master'))
eq_(commits, commits_default)
eq_(len(commits), 1)
commits_stop0 = list(repo.get_branch_commits(stop=commits[0].hexsha))
eq_(commits_stop0, [])
commits_hexsha = list(repo.get_branch_commits(value='hexsha'))
commits_hexsha_left = list(repo.get_branch_commits(value='hexsha', limit='left-only'))
eq_([commits[0].hexsha], commits_hexsha)
# our unittest is rudimentary ;-)
eq_(commits_hexsha_left, commits_hexsha)
repo.precommit() # to stop all the batched processes for swallow_outputs
raise SkipTest("TODO: Was more of a smoke test -- improve testing")
def test_GitRepo_git_get_branch_commits(src):
repo = GitRepo(src, create=True)
with open(op.join(src, 'file.txt'), 'w') as f:
f.write('load')
repo.add('*')
repo.commit('committing')
commits_default = list(repo.get_branch_commits())
commits = list(repo.get_branch_commits('master'))
eq_(commits, commits_default)
eq_(len(commits), 1)
commits_stop0 = list(repo.get_branch_commits(stop=commits[0].hexsha))
eq_(commits_stop0, [])
commits_hexsha = list(repo.get_branch_commits(value='hexsha'))
commits_hexsha_left = list(
repo.get_branch_commits(value='hexsha', limit='left-only'))
eq_([commits[0].hexsha], commits_hexsha)
# our unittest is rudimentary ;-)
eq_(commits_hexsha_left, commits_hexsha)
raise SkipTest("TODO: Was more of a smoke test -- improve testing")
def test_hierarchy(topdir):
# GH 1178
from datalad.api import create_test_dataset
with swallow_logs(), swallow_outputs():
dss = create_test_dataset(topdir, spec='1/1')
eq_(len(dss), 3)
eq_(dss[0], topdir)
for ids, ds in enumerate(dss):
ok_clean_git(ds, annex=False)
# each one should have 2 commits (but the last one)-- one for file and
# another one for sub-dataset
repo = GitRepo(ds)
eq_(len(list(repo.get_branch_commits())), 1 + int(ids < 2))
def test_hierarchy(topdir):
# GH 1178
from datalad.api import create_test_dataset
with swallow_logs(), swallow_outputs():
dss = create_test_dataset(topdir, spec='1/1')
eq_(len(dss), 3)
eq_(dss[0], topdir)
for ids, ds in enumerate(dss):
ok_clean_git(ds, annex=False)
# each one should have 2 commits (but the last one)-- one for file and
# another one for sub-dataset
repo = GitRepo(ds)
eq_(len(list(repo.get_branch_commits())), 1 + int(ids<2))
def test_GitRepo_ssh_push(repo_path, remote_path):
from datalad import ssh_manager
remote_repo = GitRepo(remote_path, create=True)
url = "ssh://localhost" + op.abspath(remote_path)
socket_path = op.join(ssh_manager.socket_dir,
get_connection_hash('localhost'))
repo = GitRepo(repo_path, create=True)
repo.add_remote("ssh-remote", url)
# modify local repo:
repo.checkout("ssh-test", ['-b'])
with open(op.join(repo.path, "ssh_testfile.dat"), "w") as f:
f.write("whatever")
repo.add("ssh_testfile.dat")
repo.commit("ssh_testfile.dat added.")
# file is not known to the remote yet:
assert_not_in("ssh_testfile.dat", remote_repo.get_indexed_files())
# push changes:
pushed = repo.push(remote="ssh-remote", refspec="ssh-test")
# test PushInfo object for
assert_in("ssh-remote/ssh-test",
[commit.remote_ref.name for commit in pushed])
# the connection is known to the SSH manager, since fetch() requested it:
assert_in(socket_path, ssh_manager._connections)
# and socket was created:
ok_(op.exists(socket_path))
# remote now knows the changes:
assert_in("ssh-test", remote_repo.get_branches())
assert_in("ssh_testfile.dat", remote_repo.get_files("ssh-test"))
# amend to make it require "--force":
repo.commit("amended", options=['--amend'])
# push without --force should yield an error:
pushed = repo.push(remote="ssh-remote", refspec="ssh-test")
assert_in("[rejected] (non-fast-forward)", pushed[0].summary)
# now push using force:
repo.push(remote="ssh-remote", refspec="ssh-test", force=True)
# correct commit message in remote:
assert_in("amended",
list(remote_repo.get_branch_commits('ssh-test'))[-1].summary)
def test_GitRepo_ssh_push(repo_path, remote_path):
from datalad import ssh_manager
remote_repo = GitRepo(remote_path, create=True)
url = "ssh://localhost" + op.abspath(remote_path)
socket_path = op.join(ssh_manager.socket_dir, get_connection_hash('localhost'))
repo = GitRepo(repo_path, create=True)
repo.add_remote("ssh-remote", url)
# modify local repo:
repo.checkout("ssh-test", ['-b'])
with open(op.join(repo.path, "ssh_testfile.dat"), "w") as f:
f.write("whatever")
repo.add("ssh_testfile.dat")
repo.commit("ssh_testfile.dat added.")
# file is not known to the remote yet:
assert_not_in("ssh_testfile.dat", remote_repo.get_indexed_files())
# push changes:
pushed = repo.push(remote="ssh-remote", refspec="ssh-test")
# test PushInfo object for
assert_in("ssh-remote/ssh-test", [commit.remote_ref.name for commit in pushed])
# the connection is known to the SSH manager, since fetch() requested it:
assert_in(socket_path, ssh_manager._connections)
# and socket was created:
ok_(op.exists(socket_path))
# remote now knows the changes:
assert_in("ssh-test", remote_repo.get_branches())
assert_in("ssh_testfile.dat", remote_repo.get_files("ssh-test"))
# amend to make it require "--force":
repo.commit("amended", options=['--amend'])
# push without --force should yield an error:
pushed = repo.push(remote="ssh-remote", refspec="ssh-test")
assert_in("[rejected] (non-fast-forward)", pushed[0].summary)
# now push using force:
repo.push(remote="ssh-remote", refspec="ssh-test", force=True)
# correct commit message in remote:
assert_in("amended",
list(remote_repo.get_branch_commits('ssh-test'))[-1].summary)
def test_publish_recursive(origin, src_path, dst_path, sub1_pub, sub2_pub):
# prepare src
source = install(src_path, source=origin, recursive=True)[0]
# create plain git at target:
target = GitRepo(dst_path, create=True)
target.checkout("TMP", ["-b"])
source.repo.add_remote("target", dst_path)
# subdatasets have no remote yet, so recursive publishing should fail:
with assert_raises(ValueError) as cm:
publish(dataset=source, to="target", recursive=True)
assert_in("No sibling 'target' found.", str(cm.exception))
# now, set up targets for the submodules:
sub1_target = GitRepo(sub1_pub, create=True)
sub1_target.checkout("TMP", ["-b"])
sub2_target = AnnexRepo(sub2_pub, create=True)
sub2_target.checkout("TMP", ["-b"])
sub1 = GitRepo(opj(src_path, 'subm 1'), create=False)
sub2 = GitRepo(opj(src_path, 'subm 2'), create=False)
sub1.add_remote("target", sub1_pub)
sub2.add_remote("target", sub2_pub)
# publish recursively
with swallow_logs(new_level=logging.DEBUG) as cml:
res = publish(dataset=source, to="target", recursive=True)
assert_not_in('forced update', cml.out,
"we probably haven't merged git-annex before pushing")
# testing result list
# (Note: Dataset lacks __eq__ for now. Should this be based on path only?)
assert_is_instance(res, tuple)
assert_is_instance(res[0], list)
assert_is_instance(res[1], list)
eq_(res[1], []) # nothing failed/was skipped
for item in res[0]:
assert_is_instance(item, Dataset)
eq_({res[0][0].path, res[0][1].path, res[0][2].path},
{src_path, sub1.path, sub2.path})
eq_(list(target.get_branch_commits("master")),
list(source.repo.get_branch_commits("master")))
eq_(list(target.get_branch_commits("git-annex")),
list(source.repo.get_branch_commits("git-annex")))
eq_(list(sub1_target.get_branch_commits("master")),
list(sub1.get_branch_commits("master")))
eq_(list(sub1_target.get_branch_commits("git-annex")),
list(sub1.get_branch_commits("git-annex")))
eq_(list(sub2_target.get_branch_commits("master")),
list(sub2.get_branch_commits("master")))
eq_(list(sub2_target.get_branch_commits("git-annex")),
list(sub2.get_branch_commits("git-annex")))
# test for publishing with --since. By default since no changes, only current pushed
res_ = publish(dataset=source, recursive=True)
# only current one would get pushed
eq_(set(r.path for r in res_[0]), {src_path})
# all get pushed
res_ = publish(dataset=source, recursive=True, since='HEAD^')
eq_(set(r.path for r in res_[0]), {src_path, sub1.path, sub2.path})
# Let's now update one subm
with open(opj(sub2.path, "file.txt"), 'w') as f:
f.write('')
sub2.add('file.txt')
sub2.commit("")
# TODO: Doesn't work: https://github.com/datalad/datalad/issues/636
#source.save("changed sub2", auto_add_changes=True)
source.repo.commit("", options=['-a'])
res_ = publish(dataset=source, recursive=True)
# only updated ones were published
eq_(set(r.path for r in res_[0]), {src_path, sub2.path})
def test_publish_recursive(pristine_origin, origin_path, src_path, dst_path, sub1_pub, sub2_pub):
# we will be publishing back to origin, so to not alter testrepo
# we will first clone it
origin = install(origin_path, source=pristine_origin, recursive=True)
# prepare src
source = install(src_path, source=origin_path, recursive=True)
# create plain git at target:
target = GitRepo(dst_path, create=True)
target.checkout("TMP", ["-b"])
source.repo.add_remote("target", dst_path)
# subdatasets have no remote yet, so recursive publishing should fail:
with assert_raises(ValueError) as cm:
publish(dataset=source, to="target", recursive=True)
assert_in("Unknown target sibling 'target'", exc_str(cm.exception))
# now, set up targets for the submodules:
sub1_target = GitRepo(sub1_pub, create=True)
sub1_target.checkout("TMP", ["-b"])
sub2_target = AnnexRepo(sub2_pub, create=True)
# we will be testing presence of the file content, so let's make it progress
sub2_target.config.set('receive.denyCurrentBranch', 'updateInstead', where='local')
sub1 = GitRepo(opj(src_path, 'subm 1'), create=False)
sub2 = GitRepo(opj(src_path, 'subm 2'), create=False)
sub1.add_remote("target", sub1_pub)
sub2.add_remote("target", sub2_pub)
# publish recursively
with swallow_logs(new_level=logging.DEBUG) as cml:
res = publish(dataset=source, to="target", recursive=True)
assert_not_in(
'forced update', cml.out,
"we probably haven't merged git-annex before pushing"
)
# testing result list
# (Note: Dataset lacks __eq__ for now. Should this be based on path only?)
assert_is_instance(res, tuple)
assert_is_instance(res[0], list)
assert_is_instance(res[1], list)
eq_(res[1], []) # nothing failed/was skipped
for item in res[0]:
assert_is_instance(item, Dataset)
eq_({res[0][0].path, res[0][1].path, res[0][2].path},
{src_path, sub1.path, sub2.path})
eq_(list(target.get_branch_commits("master")),
list(source.repo.get_branch_commits("master")))
eq_(list(target.get_branch_commits("git-annex")),
list(source.repo.get_branch_commits("git-annex")))
eq_(list(sub1_target.get_branch_commits("master")),
list(sub1.get_branch_commits("master")))
eq_(list(sub1_target.get_branch_commits("git-annex")),
list(sub1.get_branch_commits("git-annex")))
eq_(list(sub2_target.get_branch_commits("master")),
list(sub2.get_branch_commits("master")))
eq_(list(sub2_target.get_branch_commits("git-annex")),
list(sub2.get_branch_commits("git-annex")))
# we are tracking origin but origin has different git-annex, since we
# cloned from it, so it is not aware of our git-annex
neq_(list(origin.repo.get_branch_commits("git-annex")),
list(source.repo.get_branch_commits("git-annex")))
# So if we first publish to it recursively, we would update
# all sub-datasets since git-annex branch would need to be pushed
res_ = publish(dataset=source, recursive=True)
eq_(set(r.path for r in res_[0]),
set(opj(*([source.path] + x)) for x in ([], ['subm 1'], ['subm 2'])))
# and now should carry the same state for git-annex
eq_(list(origin.repo.get_branch_commits("git-annex")),
list(source.repo.get_branch_commits("git-annex")))
# test for publishing with --since. By default since no changes, nothing pushed
res_ = publish(dataset=source, recursive=True)
eq_(set(r.path for r in res_[0]), set())
# still nothing gets pushed, because origin is up to date
res_ = publish(dataset=source, recursive=True, since='HEAD^')
eq_(set(r.path for r in res_[0]), set([]))
# and we should not fail if we run it from within the dataset
with chpwd(source.path):
res_ = publish(recursive=True, since='HEAD^')
eq_(set(r.path for r in res_[0]), set([]))
# Let's now update one subm
with open(opj(sub2.path, "file.txt"), 'w') as f:
f.write('')
# add to subdataset, does not alter super dataset!
# MIH: use `to_git` because original test author used
# and explicit `GitRepo.add` -- keeping this for now
Dataset(sub2.path).add('file.txt', to_git=True)
# Let's now update one subm
create_tree(sub2.path, {'file.dat': 'content'})
# add to subdataset, without reflecting the change in its super(s)
Dataset(sub2.path).add('file.dat')
# note: will publish to origin here since that is what it tracks
res_published, res_skipped = publish(dataset=source, recursive=True)
# only updates published, i.e. just the subdataset, super wasn't altered
# nothing copied!
eq_(res_published, [Dataset(sub2.path)])
eq_(res_skipped, [])
# since published to origin -- destination should not get that file
nok_(lexists(opj(sub2_target.path, 'file.dat')))
res_published, res_skipped = publish(dataset=source, to='target', recursive=True)
eq_(res_published, [Dataset(sub2.path)])
# Note: with updateInstead only in target2 and not saving change in
# super-dataset we would have made remote dataset, if we had entire
# hierarchy, to be somewhat inconsistent.
# But here, since target datasets are independent -- it is ok
# and the file itself was not transferred but now exists
ok_(lexists(opj(sub2_target.path, 'file.dat')))
nok_(sub2_target.file_has_content('file.dat'))
# but now we can redo publish recursively, at least stating to consider
# explicitly to copy .
res_published, res_skipped = publish(
'.',
dataset=source, to='target',
recursive=True
)
ok_(sub2_target.file_has_content('file.dat'))
eq_(res_published, ['file.dat']) # note that this report makes little sense without path to the repository
def test_publish_recursive(pristine_origin, origin_path, src_path, dst_path,
sub1_pub, sub2_pub):
# we will be publishing back to origin, so to not alter testrepo
# we will first clone it
origin = install(origin_path, source=pristine_origin, recursive=True)
# prepare src
source = install(src_path, source=origin.path, recursive=True)
# we will be trying to push into this later on, need to give permissions...
origin_sub2 = Dataset(opj(origin_path, '2'))
origin_sub2.config.set('receive.denyCurrentBranch',
'updateInstead',
where='local')
## TODO this manual fixup is needed due to gh-1548 -- needs proper solution
#os.remove(opj(origin_sub2.path, '.git'))
#os.rename(opj(origin_path, '.git', 'modules', '2'), opj(origin_sub2.path, '.git'))
# create plain git at target:
target = GitRepo(dst_path, create=True)
target.checkout("TMP", ["-b"])
source.repo.add_remote("target", dst_path)
# subdatasets have no remote yet, so recursive publishing should fail:
res = publish(dataset=source,
to="target",
recursive=True,
on_failure='ignore')
assert_result_count(res, 3)
assert_result_count(res, 1, status='ok', type='dataset', path=source.path)
assert_result_count(res,
2,
status='error',
message=("Unknown target sibling '%s' for publication",
'target'))
# now, set up targets for the submodules:
sub1_target = GitRepo(sub1_pub, create=True)
sub1_target.checkout("TMP", ["-b"])
sub2_target = AnnexRepo(sub2_pub, create=True)
# we will be testing presence of the file content, so let's make it progress
sub2_target.config.set('receive.denyCurrentBranch',
'updateInstead',
where='local')
sub1 = GitRepo(opj(src_path, 'subm 1'), create=False)
sub2 = GitRepo(opj(src_path, '2'), create=False)
sub1.add_remote("target", sub1_pub)
sub2.add_remote("target", sub2_pub)
# publish recursively
with swallow_logs(new_level=logging.DEBUG) as cml:
res = publish(dataset=source, to="target", recursive=True)
assert_not_in('forced update', cml.out,
"we probably haven't merged git-annex before pushing")
# testing result list
# base dataset was already published above, notneeded again
assert_status(('ok', 'notneeded'), res) # nothing failed
assert_result_count(res, 3, type='dataset')
eq_({r['path'] for r in res}, {src_path, sub1.path, sub2.path})
eq_(list(target.get_branch_commits("master")),
list(source.repo.get_branch_commits("master")))
eq_(list(target.get_branch_commits("git-annex")),
list(source.repo.get_branch_commits("git-annex")))
eq_(list(sub1_target.get_branch_commits("master")),
list(sub1.get_branch_commits("master")))
eq_(list(sub1_target.get_branch_commits("git-annex")),
list(sub1.get_branch_commits("git-annex")))
eq_(list(sub2_target.get_branch_commits("master")),
list(sub2.get_branch_commits("master")))
eq_(list(sub2_target.get_branch_commits("git-annex")),
list(sub2.get_branch_commits("git-annex")))
# we are tracking origin but origin has different git-annex, since we
# cloned from it, so it is not aware of our git-annex
neq_(list(origin.repo.get_branch_commits("git-annex")),
list(source.repo.get_branch_commits("git-annex")))
# So if we first publish to it recursively, we would update
# all sub-datasets since git-annex branch would need to be pushed
res_ = publish(dataset=source, recursive=True)
assert_result_count(res_, 1, status='ok', path=source.path)
assert_result_count(res_, 1, status='ok', path=sub1.path)
assert_result_count(res_, 1, status='ok', path=sub2.path)
# and now should carry the same state for git-annex
eq_(list(origin.repo.get_branch_commits("git-annex")),
list(source.repo.get_branch_commits("git-annex")))
# test for publishing with --since. By default since no changes, nothing pushed
res_ = publish(dataset=source, recursive=True)
assert_result_count(res_, 3, status='notneeded', type='dataset')
# still nothing gets pushed, because origin is up to date
res_ = publish(dataset=source, recursive=True, since='HEAD^')
assert_result_count(res_, 3, status='notneeded', type='dataset')
# and we should not fail if we run it from within the dataset
with chpwd(source.path):
res_ = publish(recursive=True, since='HEAD^')
assert_result_count(res_, 3, status='notneeded', type='dataset')
# Let's now update one subm
with open(opj(sub2.path, "file.txt"), 'w') as f:
f.write('')
# add to subdataset, does not alter super dataset!
# MIH: use `to_git` because original test author used
# and explicit `GitRepo.add` -- keeping this for now
Dataset(sub2.path).add('file.txt', to_git=True)
# Let's now update one subm
create_tree(sub2.path, {'file.dat': 'content'})
# add to subdataset, without reflecting the change in its super(s)
Dataset(sub2.path).add('file.dat')
# note: will publish to origin here since that is what it tracks
res_ = publish(dataset=source, recursive=True, on_failure='ignore')
## only updates published, i.e. just the subdataset, super wasn't altered
## nothing copied!
assert_status(('ok', 'notneeded'), res_)
assert_result_count(res_, 1, status='ok', path=sub2.path, type='dataset')
assert_result_count(res_, 0, path=opj(sub2.path, 'file.dat'), type='file')
# since published to origin -- destination should not get that file
nok_(lexists(opj(sub2_target.path, 'file.dat')))
res_ = publish(dataset=source, to='target', recursive=True)
assert_status(('ok', 'notneeded'), res_)
assert_result_count(res_, 1, status='ok', path=sub2.path, type='dataset')
assert_result_count(res_, 0, path=opj(sub2.path, 'file.dat'), type='file')
# Note: with updateInstead only in target2 and not saving change in
# super-dataset we would have made remote dataset, if we had entire
# hierarchy, to be somewhat inconsistent.
# But here, since target datasets are independent -- it is ok
# and the file itself was transferred
ok_(lexists(opj(sub2_target.path, 'file.dat')))
nok_(sub2_target.file_has_content('file.dat'))
## but now we can redo publish recursively, with explicitly requested data transfer
res_ = publish(dataset=source,
to='target',
recursive=True,
transfer_data='all')
ok_(sub2_target.file_has_content('file.dat'))
assert_result_count(res_, 1, status='ok', path=opj(sub2.path, 'file.dat'))
# Let's save those present changes and publish while implying "since last
# merge point"
source.save(message="Changes in subm2")
# and test if it could deduce the remote/branch to push to
source.config.set('branch.master.remote', 'target', where='local')
with chpwd(source.path):
res_ = publish(since='', recursive=True)
# TODO: somehow test that there were no even attempt to diff within "subm 1"
# since if `--since=''` worked correctly, nothing has changed there and it
# should have not been even touched
assert_status(('ok', 'notneeded'), res_)
assert_result_count(res_, 1, status='ok', path=source.path, type='dataset')
def test_publish_recursive(pristine_origin, origin_path, src_path, dst_path, sub1_pub, sub2_pub):
# we will be publishing back to origin, so to not alter testrepo
# we will first clone it
origin = install(origin_path, source=pristine_origin, recursive=True)
# prepare src
source = install(src_path, source=origin.path, recursive=True)
# we will be trying to push into this later on, need to give permissions...
origin_sub2 = Dataset(opj(origin_path, '2'))
origin_sub2.config.set(
'receive.denyCurrentBranch', 'updateInstead', where='local')
## TODO this manual fixup is needed due to gh-1548 -- needs proper solution
#os.remove(opj(origin_sub2.path, '.git'))
#os.rename(opj(origin_path, '.git', 'modules', '2'), opj(origin_sub2.path, '.git'))
# create plain git at target:
target = GitRepo(dst_path, create=True)
target.checkout("TMP", ["-b"])
source.repo.add_remote("target", dst_path)
# subdatasets have no remote yet, so recursive publishing should fail:
res = publish(dataset=source, to="target", recursive=True, on_failure='ignore')
assert_result_count(res, 3)
assert_result_count(
res, 1, status='ok', type='dataset', path=source.path)
assert_result_count(
res, 2, status='error',
message=("Unknown target sibling '%s' for publication", 'target'))
# now, set up targets for the submodules:
sub1_target = GitRepo(sub1_pub, create=True)
sub1_target.checkout("TMP", ["-b"])
sub2_target = AnnexRepo(sub2_pub, create=True)
# we will be testing presence of the file content, so let's make it progress
sub2_target.config.set('receive.denyCurrentBranch', 'updateInstead', where='local')
sub1 = GitRepo(opj(src_path, 'subm 1'), create=False)
sub2 = GitRepo(opj(src_path, '2'), create=False)
sub1.add_remote("target", sub1_pub)
sub2.add_remote("target", sub2_pub)
# publish recursively
with swallow_logs(new_level=logging.DEBUG) as cml:
res = publish(dataset=source, to="target", recursive=True)
assert_not_in(
'forced update', cml.out,
"we probably haven't merged git-annex before pushing"
)
# testing result list
# base dataset was already published above, notneeded again
assert_status(('ok', 'notneeded'), res) # nothing failed
assert_result_count(
res, 3, type='dataset')
eq_({r['path'] for r in res},
{src_path, sub1.path, sub2.path})
eq_(list(target.get_branch_commits("master")),
list(source.repo.get_branch_commits("master")))
eq_(list(target.get_branch_commits("git-annex")),
list(source.repo.get_branch_commits("git-annex")))
eq_(list(sub1_target.get_branch_commits("master")),
list(sub1.get_branch_commits("master")))
eq_(list(sub1_target.get_branch_commits("git-annex")),
list(sub1.get_branch_commits("git-annex")))
eq_(list(sub2_target.get_branch_commits("master")),
list(sub2.get_branch_commits("master")))
eq_(list(sub2_target.get_branch_commits("git-annex")),
list(sub2.get_branch_commits("git-annex")))
# we are tracking origin but origin has different git-annex, since we
# cloned from it, so it is not aware of our git-annex
neq_(list(origin.repo.get_branch_commits("git-annex")),
list(source.repo.get_branch_commits("git-annex")))
# So if we first publish to it recursively, we would update
# all sub-datasets since git-annex branch would need to be pushed
res_ = publish(dataset=source, recursive=True)
assert_result_count(res_, 1, status='ok', path=source.path)
assert_result_count(res_, 1, status='ok', path=sub1.path)
assert_result_count(res_, 1, status='ok', path=sub2.path)
# and now should carry the same state for git-annex
eq_(list(origin.repo.get_branch_commits("git-annex")),
list(source.repo.get_branch_commits("git-annex")))
# test for publishing with --since. By default since no changes, nothing pushed
res_ = publish(dataset=source, recursive=True)
assert_result_count(
res_, 3, status='notneeded', type='dataset')
# still nothing gets pushed, because origin is up to date
res_ = publish(dataset=source, recursive=True, since='HEAD^')
assert_result_count(
res_, 3, status='notneeded', type='dataset')
# and we should not fail if we run it from within the dataset
with chpwd(source.path):
res_ = publish(recursive=True, since='HEAD^')
assert_result_count(
res_, 3, status='notneeded', type='dataset')
# Let's now update one subm
with open(opj(sub2.path, "file.txt"), 'w') as f:
f.write('')
# add to subdataset, does not alter super dataset!
# MIH: use `to_git` because original test author used
# and explicit `GitRepo.add` -- keeping this for now
Dataset(sub2.path).add('file.txt', to_git=True)
# Let's now update one subm
create_tree(sub2.path, {'file.dat': 'content'})
# add to subdataset, without reflecting the change in its super(s)
Dataset(sub2.path).add('file.dat')
# note: will publish to origin here since that is what it tracks
res_ = publish(dataset=source, recursive=True, on_failure='ignore')
## only updates published, i.e. just the subdataset, super wasn't altered
## nothing copied!
assert_status(('ok', 'notneeded'), res_)
assert_result_count(res_, 1, status='ok', path=sub2.path, type='dataset')
assert_result_count(res_, 0, path=opj(sub2.path, 'file.dat'), type='file')
# since published to origin -- destination should not get that file
nok_(lexists(opj(sub2_target.path, 'file.dat')))
res_ = publish(dataset=source, to='target', recursive=True)
assert_status(('ok', 'notneeded'), res_)
assert_result_count(res_, 1, status='ok', path=sub2.path, type='dataset')
assert_result_count(res_, 0, path=opj(sub2.path, 'file.dat'), type='file')
# Note: with updateInstead only in target2 and not saving change in
# super-dataset we would have made remote dataset, if we had entire
# hierarchy, to be somewhat inconsistent.
# But here, since target datasets are independent -- it is ok
# and the file itself was transferred
ok_(lexists(opj(sub2_target.path, 'file.dat')))
nok_(sub2_target.file_has_content('file.dat'))
## but now we can redo publish recursively, with explicitly requested data transfer
res_ = publish(
dataset=source, to='target',
recursive=True,
transfer_data='all'
)
ok_(sub2_target.file_has_content('file.dat'))
assert_result_count(
res_, 1, status='ok', path=opj(sub2.path, 'file.dat'))
# Let's save those present changes and publish while implying "since last
# merge point"
source.save(message="Changes in subm2")
# and test if it could deduce the remote/branch to push to
source.config.set('branch.master.remote', 'target', where='local')
with chpwd(source.path):
res_ = publish(since='', recursive=True)
# TODO: somehow test that there were no even attempt to diff within "subm 1"
# since if `--since=''` worked correctly, nothing has changed there and it
# should have not been even touched
assert_status(('ok', 'notneeded'), res_)
assert_result_count(res_, 1, status='ok', path=source.path, type='dataset')
def test_publish_recursive(origin, src_path, dst_path, sub1_pub, sub2_pub):
# prepare src
source = install(src_path, source=origin, recursive=True)[0]
# create plain git at target:
target = GitRepo(dst_path, create=True)
target.checkout("TMP", ["-b"])
source.repo.add_remote("target", dst_path)
# subdatasets have no remote yet, so recursive publishing should fail:
with assert_raises(ValueError) as cm:
publish(dataset=source, to="target", recursive=True)
assert_in("No sibling 'target' found", exc_str(cm.exception))
# now, set up targets for the submodules:
sub1_target = GitRepo(sub1_pub, create=True)
sub1_target.checkout("TMP", ["-b"])
sub2_target = AnnexRepo(sub2_pub, create=True)
sub2_target.checkout("TMP", ["-b"])
sub1 = GitRepo(opj(src_path, 'subm 1'), create=False)
sub2 = GitRepo(opj(src_path, 'subm 2'), create=False)
sub1.add_remote("target", sub1_pub)
sub2.add_remote("target", sub2_pub)
# publish recursively
with swallow_logs(new_level=logging.DEBUG) as cml:
res = publish(dataset=source, to="target", recursive=True)
assert_not_in(
'forced update', cml.out,
"we probably haven't merged git-annex before pushing"
)
# testing result list
# (Note: Dataset lacks __eq__ for now. Should this be based on path only?)
assert_is_instance(res, tuple)
assert_is_instance(res[0], list)
assert_is_instance(res[1], list)
eq_(res[1], []) # nothing failed/was skipped
for item in res[0]:
assert_is_instance(item, Dataset)
eq_({res[0][0].path, res[0][1].path, res[0][2].path},
{src_path, sub1.path, sub2.path})
eq_(list(target.get_branch_commits("master")),
list(source.repo.get_branch_commits("master")))
eq_(list(target.get_branch_commits("git-annex")),
list(source.repo.get_branch_commits("git-annex")))
eq_(list(sub1_target.get_branch_commits("master")),
list(sub1.get_branch_commits("master")))
eq_(list(sub1_target.get_branch_commits("git-annex")),
list(sub1.get_branch_commits("git-annex")))
eq_(list(sub2_target.get_branch_commits("master")),
list(sub2.get_branch_commits("master")))
eq_(list(sub2_target.get_branch_commits("git-annex")),
list(sub2.get_branch_commits("git-annex")))
# test for publishing with --since. By default since no changes, only current pushed
res_ = publish(dataset=source, recursive=True)
# only current one would get pushed
eq_(set(r.path for r in res_[0]), {src_path})
# all get pushed
res_ = publish(dataset=source, recursive=True, since='HEAD^')
eq_(set(r.path for r in res_[0]), {src_path, sub1.path, sub2.path})
# Let's now update one subm
with open(opj(sub2.path, "file.txt"), 'w') as f:
f.write('')
sub2.add('file.txt')
sub2.commit("")
# TODO: Doesn't work: https://github.com/datalad/datalad/issues/636
#source.save("changed sub2", all_changes=True)
source.repo.commit("", options=['-a'])
res_ = publish(dataset=source, recursive=True)
# only updated ones were published
eq_(set(r.path for r in res_[0]), {src_path, sub2.path})
