Esempio n. 1
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    def test_seasonalise_weekly(self):
        dirname, filename = os.path.split(os.path.abspath(__file__))
        cl = pd.read_csv(os.path.join(dirname, 'test_weekly.csv'),
                         index_col=0,
                         parse_dates=True,
                         dayfirst=True)

        seas = transforms.seasonalise_weekly(cl['PET.WCRSTUS1.W'])

        self.assertEqual(
            seas[2020].loc[datetime.fromisocalendar(
                dates.curyear,
                pd.to_datetime('2020-01-03').isocalendar()[1], 1)], 1066027)
        self.assertEqual(
            seas[2020].loc[datetime.fromisocalendar(
                dates.curyear,
                pd.to_datetime('2020-01-10').isocalendar()[1], 1)], 1063478)
        self.assertEqual(
            seas[2000].loc[datetime.fromisocalendar(
                dates.curyear,
                pd.to_datetime('2000-01-07').isocalendar()[1], 1)], 844791)
        self.assertEqual(
            seas[2000].loc[datetime.fromisocalendar(
                dates.curyear,
                pd.to_datetime('2000-12-29').isocalendar()[1], 1)], 813959)
Esempio n. 2
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def test_timespan_args_begin_iso_week_and_thru_iso_week():
    """Tests timespan arguments: begin iso week, thru iso week.
    """
    start, end = timespan(begin_str=REF_BEGIN_ISO, thru_str=REF_THRU_ISO)
    begin = datetime.fromisocalendar(2020, 10, 1).astimezone()
    thru = datetime.fromisocalendar(2020, 25,
                                    1).astimezone() + timedelta(days=7)

    assert isinstance(start, datetime)
    assert start == begin

    assert isinstance(end, datetime)
    assert end == thru
Esempio n. 3
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    def test_event_renders_template(self, default_user):
        r = self.client.post(
            "/event",
            data={
                "year": "2020",
                "week": "1",
                "hour": "1",
                "day": "1"
            },
        )

        template, context = self.rendered_templates[0]

        AssertThat(r.status_code).IsEqualTo(200)
        AssertThat(template.name).IsEqualTo("event.html")
        AssertThat(context["start_date"]).IsEqualTo(
            datetime.fromisocalendar(2020, 1, 2).strftime("%Y-%m-%d"))
        AssertThat(context["start_time"]).IsEqualTo("01:00:00")
        AssertThat(context["end_time"]).IsEqualTo("02:00:00")
        AssertThat(r.data).DoesNotContain(b'placeholder="Title" readonly')
        AssertThat(
            r.data).DoesNotContain(b'placeholder="Description" readonly')
        AssertThat(r.data).DoesNotContain(b'placeholder="Location" readonly')
        AssertThat(r.data).Contains(b'id="start_date" readonly')
        AssertThat(r.data).DoesNotContain(b'id="start_time" readonly')
        AssertThat(r.data).Contains(b'id="end_date" readonly')
        AssertThat(r.data).DoesNotContain(b'id="end_time" readonly')
        AssertThat(r.data).DoesNotContain(
            b'onclick="return false;" name="business_hour"')
        AssertThat(r.data).Contains(b'value="Save"')
        AssertThat(r.data).Contains(b'value="Delete"')
Esempio n. 4
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 def _parse_date(spotify_release_date):
     """For Herbie Hancock alone, I've seen these release_dates:
     - "1999-01-01"
     - "2009"
     - "1980-03"
     """
     # sometime Spotify just gives a year
     if len(spotify_release_date) == 4:
         # default to first day of year
         return datetime.fromisocalendar(int(spotify_release_date), 1, 1)
     elif len(spotify_release_date) == 7:
         # default to first day of month
         return datetime.fromisocalendar(int(spotify_release_date[:4]),
                                         int(spotify_release_date[5:7]), 1)
     else:
         return datetime.fromisoformat(spotify_release_date)
Esempio n. 5
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def get_vaccination_data(data_url,
                         sheet_name,
                         set_date=False,
                         only_sweden=False,
                         needed_columns=None):
    df_vacc = pd.read_excel(data_url,
                            sheet_name=sheet_name,
                            header=0,
                            engine="openpyxl",
                            keep_default_na=False)

    # if needed, convert week date to full date, initially set day as Monday
    if set_date:
        df_vacc["day"] = 1
        df_vacc["date"] = df_vacc.apply(lambda row: dt.fromisocalendar(
            row["År"], row["Vecka"], row["day"]),
                                        axis=1)

    # We need to calculate values for the population. Don't use the values for just the population eligible for vaccination
    df_vacc["Andel vaccinerade"] = df_vacc["Andel vaccinerade"].replace(
        ",", ".", regex=True)
    df_vacc["Procent vaccinerade"] = (
        df_vacc["Andel vaccinerade"].astype(float)) * 100

    # need to change 'Sverige' to 'Sweden'
    df_vacc = df_vacc.replace("| Sverige |", "Sweden")
    if only_sweden:
        df_vacc = df_vacc[df_vacc["Region"] == "Sweden"]

    # have only relevant column if needed
    if needed_columns:
        df_vacc = df_vacc[needed_columns]

    return df_vacc
Esempio n. 6
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def test_set_date_pair():
    """
        Scenario: Set date_start and date_end for both creation and modification.
        Given:
         - User has provided valid credentials.
        When:
         - Every time cyberint_list_alerts is called.
        Then:
         - Ensure dates return match what is needed (correct format)
    """
    from Cyberint import set_date_pair
    start_time = '2020-12-01T00:00:00Z'
    end_time = '2020-12-05T00:00:00Z'
    assert set_date_pair(start_time, end_time, None) == (start_time, end_time)
    new_range = '3 Days'
    three_days_ago = datetime.strftime(datetime.now() - timedelta(days=3),
                                       DATE_FORMAT)
    current_time = datetime.strftime(datetime.now(), DATE_FORMAT)
    assert set_date_pair(start_time, end_time,
                         new_range) == (three_days_ago, current_time)

    assert set_date_pair(start_time, None,
                         None) == (start_time,
                                   datetime.strftime(datetime.now(),
                                                     DATE_FORMAT))
    assert set_date_pair(None, end_time, None) == (datetime.strftime(
        datetime.fromisocalendar(2020, 2, 1), DATE_FORMAT), end_time)
Esempio n. 7
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def pos_to_xarray(posfile: str, weekstart_year: int, weekstart_week: int):
    if not xarray_enabled:
        raise EnvironmentError('pos_to_xarray: Unable to import xarray, pos_to_xarray disabled')
    attrs = {'mission_date': datetime.fromisocalendar(weekstart_year, weekstart_week, 1).strftime('%Y-%m-%d %H:%M:%S')}
    posdat = _pos_convert(posfile, weekstart_year, weekstart_week)
    attrs['pos_files'] = {os.path.split(posfile)[1]: [float(posdat.time.values[0]), float(posdat.time.values[-1])]}
    posdat.attrs = attrs
    return posdat
Esempio n. 8
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 def test_constructor_fromisocalendar(self):
     # GH 30395
     expected_timestamp = Timestamp("2000-01-03 00:00:00")
     expected_stdlib = datetime.fromisocalendar(2000, 1, 1)
     result = Timestamp.fromisocalendar(2000, 1, 1)
     assert result == expected_timestamp
     assert result == expected_stdlib
     assert isinstance(result, Timestamp)
    def test_calculate_days_of_week_calculates_weekdays_correctly(self):
        now = datetime.now().isocalendar()

        days_of_week = self.date_time_helper.calculate_days_of_week(
            now[0], now[1]
        )

        for i in range(1, 8):
            AssertThat(days_of_week[i - 1]["date"]).IsEqualTo(
                datetime.fromisocalendar(now[0], now[1], i)
                .date()
                .strftime("(%b. %-d)")
            )
            AssertThat(days_of_week[i - 1]["name"]).IsEqualTo(
                datetime.fromisocalendar(now[0], now[1], i)
                .date()
                .strftime("%a")
            )
Esempio n. 10
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def fill_combo_box_with_first_crawl_epochs():
    values = list()
    values.append(('', ''))
    for epoch in StatisticsView.history.history:
        epoch_date = datetime.fromtimestamp(epoch.crawl_epoch)
        dlrobot_birthday = datetime.fromisocalendar(2020, 2, 1)
        if epoch_date < dlrobot_birthday:
            epoch_date = dlrobot_birthday
        values.append((str(epoch.crawl_epoch), epoch_date.strftime("%Y-%m-%d")))
    return values
    def get_end_date(self):
        end_date = datetime.fromisocalendar(
            self.__year, self.__week, self.__day + 1
        )

        if self.__hour == 23:
            end_date += timedelta(days=1)
        end_date = end_date.strftime("%Y-%m-%d")

        return end_date
Esempio n. 12
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def week_dates(week=None, year=None):

    if not week or not year:
        week_year = current_week()
        year = week_year[0]
        week = week_year[1]

    return [
        datetime.fromisocalendar(year, week, i).date() for i in range(1, 6)
    ]
Esempio n. 13
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def cont_to_date(update, context):
    user = update.message.from_user
    logger.info("2: User {} confirmed giving attendance via /Yes".format(user.first_name, update.message.text))
    context.bot.send_message(chat_id=update.effective_chat.id, text="😮 Wow that's some enthusiasm there! 😮")
    TODAY = (datetime.today() + timedelta(hours=8)).strftime("%A, %Y/%m/%d")
    context.bot.send_message(chat_id=update.effective_chat.id, text="📅 Today is *{}*.".format(TODAY), parse_mode=telegram.ParseMode.MARKDOWN)
    # context.bot.send_message(chat_id=update.effective_chat.id, text="Which is also time for you to wAkE tHE fK UP 😥😥 \n\njkjk 🥰.".format(TODAY), parse_mode=telegram.ParseMode.MARKDOWN)
    THIS_YEAR = (datetime.today() + timedelta(hours=8)).isocalendar()[0]
    THIS_WEEK = (datetime.today() + timedelta(hours=8)).isocalendar()[1]
    if (datetime.today() + timedelta(hours=8)).isocalendar()[2] < 4:
        context.bot.send_message(chat_id=update.effective_chat.id, text="jkjk 🥰.\n\n Since it's still *NOT Thurs*, you can select for this week's attendance.", parse_mode=telegram.ParseMode.MARKDOWN)
        kb = [[telegram.KeyboardButton(datetime.fromisocalendar(THIS_YEAR, THIS_WEEK, 1).strftime("%a, %Y/%m/%d"))],
              [telegram.KeyboardButton(datetime.fromisocalendar(THIS_YEAR, THIS_WEEK, 3).strftime("%a, %Y/%m/%d"))]]
    else:
        context.bot.send_message(chat_id=update.effective_chat.id, text="Since it's *PAST Thurs*, you can indicate for next week's attendance.", parse_mode=telegram.ParseMode.MARKDOWN)
        kb = [[telegram.KeyboardButton(datetime.fromisocalendar(THIS_YEAR, THIS_WEEK+1, 1).strftime("%a, %Y/%m/%d"))],
              [telegram.KeyboardButton(datetime.fromisocalendar(THIS_YEAR, THIS_WEEK+1, 3).strftime("%a, %Y/%m/%d"))]]
    kb_markup = telegram.ReplyKeyboardMarkup(kb, one_time_keyboard=True)
    update.message.reply_text("✅ Indicate the date you would come for: \n\n Alternatively, you can type in the format 'Day, 'yyyy/mm/dd'", reply_markup=kb_markup, parse_mode=telegram.ParseMode.MARKDOWN)
    return TIME
Esempio n. 14
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def test_timespan_args_week_str_and_thru_str():
    """Tests timespan arguments: week_str, thru_str.
    """
    start, end = timespan(week_str=REF_BEGIN_ISO, thru_str=REF_THRU_STR)
    begin = datetime.fromisocalendar(2020, 10, 1).astimezone()

    assert isinstance(start, datetime)
    assert start.isoformat() == begin.isoformat()

    assert isinstance(end, datetime)
    assert end.isoformat() == REF_THRU_STR
def date_func(dataset):
    dataset[["Year",
             "Week"]] = (dataset["wk"].str.split("w", expand=True).astype(int)
                         )  # break apart week and year
    dataset["day"] = 1  # set day as Monday
    dataset.drop(dataset[(dataset["Year"] == 2019)].index, inplace=True)
    dataset["date"] = dataset.apply(
        lambda row: dt.fromisocalendar(row["Year"], row["Week"], row["day"]),
        axis=1)
    dataset.drop(dataset[(dataset["date"] < "2020-01-31")].index, inplace=True)
    dataset.drop(columns=["Week", "Year", "day", "wk"], axis=1, inplace=True)
Esempio n. 16
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    def test_get_week_post_renders_week_template(self, default_user):
        self.__insert_week()
        r = self.client.post(f"/{YEAR}/{WEEK}", data=TEST_EVENT)

        template, context = self.rendered_templates[0]

        AssertThat(r.status_code).IsEqualTo(200)
        AssertThat(template.name).IsEqualTo("week.html")
        AssertThat(context["year_number"]).IsEqualTo(YEAR)
        AssertThat(context["week_number"]).IsEqualTo(WEEK)

        for i in range(1, 8):
            AssertThat(context["days_of_week"][i - 1]["date"]).IsEqualTo(
                datetime.fromisocalendar(YEAR, WEEK, i)
                .date()
                .strftime("(%b. %-d)")
            )
            AssertThat(context["days_of_week"][i - 1]["name"]).IsEqualTo(
                datetime.fromisocalendar(YEAR, WEEK, i).date().strftime("%a")
            )
Esempio n. 17
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def getAttendance(update, context):
    user = update.message.from_user
    logger.info("1/2: User {} has started querying for attendance".format(user.first_name, update.message.text))
    context.bot.send_message(chat_id=update.effective_chat.id, text="👇 Please select the date of attendance 👇")
    TODAY = (datetime.today() + timedelta(hours=8)).strftime("%A, %Y/%m/%d")
    context.bot.send_message(chat_id=update.effective_chat.id, text="📅 Today is *{}*.".format(TODAY), parse_mode=telegram.ParseMode.MARKDOWN)
    # context.bot.send_message(chat_id=update.effective_chat.id, text="Which is also time for you to wAkE tHE fK UP 😥😥 \n\njkjk 🥰.".format(TODAY), parse_mode=telegram.ParseMode.MARKDOWN)
    THIS_YEAR = (datetime.today() + timedelta(hours=8)).isocalendar()[0]
    THIS_WEEK = (datetime.today() + timedelta(hours=8)).isocalendar()[1]
    if (datetime.today() + timedelta(hours=8)).isocalendar()[2] < 4:
        context.bot.send_message(chat_id=update.effective_chat.id, text="jkjk 🥰.\n\n Since it's still *NOT Thurs*, I've prepared options for this week's attendance.", parse_mode=telegram.ParseMode.MARKDOWN)
        kb = [[telegram.KeyboardButton(datetime.fromisocalendar(THIS_YEAR, THIS_WEEK, 1).strftime("%Y/%m/%d"))],
              [telegram.KeyboardButton(datetime.fromisocalendar(THIS_YEAR, THIS_WEEK, 3).strftime("%Y/%m/%d"))]]
    else:
        context.bot.send_message(chat_id=update.effective_chat.id, text="Since it's *PAST Thurs*, I've prepared options for next week's attendance.", parse_mode=telegram.ParseMode.MARKDOWN)
        kb = [[telegram.KeyboardButton(datetime.fromisocalendar(THIS_YEAR, THIS_WEEK+1, 1).strftime("%Y/%m/%d"))],
              [telegram.KeyboardButton(datetime.fromisocalendar(THIS_YEAR, THIS_WEEK+1, 3).strftime("%Y/%m/%d"))]]
    kb_markup = telegram.ReplyKeyboardMarkup(kb, one_time_keyboard=True)
    update.message.reply_text("✅ Indicate the date you would come for: \n\n Alternatively, you can type in the format 'yyyy/mm/dd' or type /No to cancel.", reply_markup=kb_markup, parse_mode=telegram.ParseMode.MARKDOWN)
    return GETATT1
Esempio n. 18
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def schedule(request):
    def get_date(req_day):
        if req_day:
            year, month = (int(x) for x in req_day.split('-'))
            return date(year, month, day=1)
        return timezone.now()

    d = get_date(request.GET.get('day', None)).isocalendar()
    year, week = d[0], d[1]
    if d[2] == 7:
        week = week + 1
    final_week = date(year, 12, 31).isocalendar()[1]
    weeks = []
    for n in range(week - 3, week + 5):
        new_week = []
        if n > final_week:
            n = n - final_week
        if n == 1:
            sunday = timezone.make_aware(
                datetime.fromisocalendar(year, final_week, 7))
            year = year + 1
        else:
            sunday = timezone.make_aware(
                datetime.fromisocalendar(year, n - 1, 7))
        new_week.append(sunday)
        for i in range(1, 7):
            day = timezone.make_aware(datetime.fromisocalendar(year, n, i))
            new_week.append(day)
        weeks.append(new_week)

    meals = Meal.objects.filter(user=request.user,
                                date__range=[weeks[0][0], weeks[-1][-1]])

    context = {
        "weeks": weeks,
        "meals": meals,
        "today":
        timezone.make_aware(datetime.fromisocalendar(d[0], d[1], d[2]))
    }

    return render(request, 'schedule/calendar.html', context)
Esempio n. 19
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def test_timespan_args_begin_iso_week_and_thru_str_missing():
    """Tests timespan arguments: begin iso week, thru_str missing.
    """
    start, end = timespan(begin_str=REF_BEGIN_ISO)
    begin = datetime.fromisocalendar(2020, 10, 1).astimezone()
    end_now = datetime.now(tz.tzlocal())

    assert isinstance(start, datetime)
    assert start == begin

    assert isinstance(end, datetime)
    assert end.isoformat()[0:18] == end_now.isoformat()[0:18]
Esempio n. 20
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def test_timespan_args_week_str_and_begin_str():
    """Tests timespan arguments: week_str, begin_str.
    """
    start, end = timespan(week_str=REF_THRU_ISO, begin_str=REF_BEGIN_STR)
    thru = datetime.fromisocalendar(2020, 25,
                                    1).astimezone() + timedelta(days=7)

    assert isinstance(start, datetime)
    assert start.isoformat() == REF_BEGIN_STR

    assert isinstance(end, datetime)
    assert end.isoformat() == thru.isoformat()
Esempio n. 21
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def smrmsg_to_xarray(smrmsgfile,
                     logfile=None,
                     weekstart_year=None,
                     weekstart_week=None):
    """
    Convert an smrmsg file to an xarray Dataset object, containing the metadata and variables that we are interested in.

    Parameters
    ----------
    smrmsgfile: str, full file path to the smrmsg file (SBET uncertainty file)
    logfile: str, full file path to the sbet export log file
    weekstart_year: int, if you aren't providing a logfile, must provide the year of the sbet here
    weekstart_week: int, if you aren't providing a logfile, must provide the week of the sbet here

    Returns
    -------
    dat: xarray Dataset, data and attribution from the sbet relevant to our survey processing

    """
    if logfile is not None:
        attrs = get_export_info_from_log(logfile)
        if attrs['mission_date'] is None:
            raise ValueError(
                'Provided log does not seem to have a mission date: {}'.format(
                    logfile))
        weekstart_year, weekstart_week, weekstart_day = attrs[
            'mission_date'].isocalendar()
    elif weekstart_year is not None and weekstart_week is not None:
        attrs = {}
    else:
        raise ValueError(
            'Expected either a log file to be provided or a year/week representing the start of the week.'
        )

    smrmsgdat = _smrmsg_convert(smrmsgfile, weekstart_year, weekstart_week)
    if smrmsgdat is not None:
        smrmsg_rate = int(1 / (smrmsgdat.time[1] - smrmsgdat.time[0]))

        final_attrs = {}
        if 'mission_date' not in attrs:
            attrs = {
                'mission_date':
                datetime.fromisocalendar(weekstart_year, weekstart_week,
                                         1).strftime('%Y-%m-%d %H:%M:%S')
            }
        final_attrs['mission_date'] = attrs['mission_date']
        final_attrs['logging rate (hz)'] = smrmsg_rate
        final_attrs['source_file'] = smrmsgfile
        smrmsgdat.attrs = final_attrs
    else:
        smrmsgdat = None
    return smrmsgdat
Esempio n. 22
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def test_get_checkouts_ordered_by_due_date(client):
    client.post(f"{API_BASE_PATH}/users/1/checkout/1")
    client.post(f"{API_BASE_PATH}/users/3/checkout/2")
    client.post(f"{API_BASE_PATH}/users/1/checkout/3")
    client.post(f"{API_BASE_PATH}/users/2/checkout/4")
    client.post(f"{API_BASE_PATH}/users/3/checkout/5")
    client.post(f"{API_BASE_PATH}/users/4/checkout/6")
    response = client.get(f"{API_BASE_PATH}/checkouts")
    data = json.loads(response.data)
    previous_due_date = datetime.fromisocalendar(3000, 1, 1)
    for checkout in data:
        assert previous_due_date > datetime.strptime(
            checkout["due_date"], "%a, %d %b %Y %H:%M:%S %Z")
Esempio n. 23
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def test_timespan_args_begin_str_missing_and_thru_iso_week():
    """Tests timespan arguments: begin_str missing, thru iso week.
    """
    start, end = timespan(thru_str=REF_THRU_ISO)
    start_first = datetime(2000, 1, 1, 0, 0).astimezone()
    thru = datetime.fromisocalendar(2020, 25,
                                    1).astimezone() + timedelta(days=7)

    assert isinstance(start, datetime)
    assert start.isoformat() == start_first.isoformat()

    assert isinstance(end, datetime)
    assert end == thru
Esempio n. 24
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    def test_fromisocalendar_date_datetime(self, dt):
        isocalendar = dt.isocalendar()
        dt_rt = datetime.fromisocalendar(*isocalendar)

        # Only the date portion of the datetime survives a round trip.
        d = dt.date()
        d_rt = dt_rt.date()

        self.assertEqual(d, d_rt)

        # .fromisocalendar() should always return a datetime at midnight
        t = time(0)
        t_rt = dt_rt.time()

        self.assertEqual(t, t_rt)
Esempio n. 25
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def fromisoweek(week_string):
    """Calculates the datetime from the specified ISO Week string.

    Args:
        week_string: The ISO week string.

    Returns:
        The datetime object.
    """
    pattern_isoweek = r'^\d{4}-W\d{2}$'

    if re.search(pattern_isoweek, week_string):
        year = int(week_string[:4])
        week = int(week_string[-2:])
        return datetime.fromisocalendar(year, week, 1).astimezone()

    return None
Esempio n. 26
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def add_meal(request, year, week, day):
    if request.method == 'POST':
        meal_form = MealForm(request.user, request.POST)
        if meal_form.is_valid():
            meal = meal_form.save(False)
            meal.user = request.user
            meal.date = timezone.make_aware(
                datetime.fromisocalendar(year, week, day))
            meal.save()
        return redirect('calendar')
    else:
        meal_form = MealForm(request.user)

    context = {
        'meal_form': meal_form,
    }
    return render(request, 'schedule/add_meal.html', context)
Esempio n. 27
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def seasonalise_weekly(df, freq='W'):
    """
    Edge case for handling weekly data - eg DOE where we need to tweak the standard
    seasonalise() method.
    :param df:
    :return:
    """
    if isinstance(df, pd.Series):
        df = pd.DataFrame(df)

    df = pd.merge(df,
                  df.index.isocalendar(),
                  left_index=True,
                  right_index=True)
    df = df.groupby([df.week, df.year]).mean()[df.columns[0]].unstack()
    # when converting back to date format, some years don't have week 53 so drop for now
    if 53 in df.index and pd.to_datetime(
            '%s-12-31' % dates.curyear).isocalendar()[1] == 52:
        df = df.drop(53)
    df.index = df.index.map(lambda x: datetime.fromisocalendar(2021, x, 1))
    return df
Esempio n. 28
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    def test_passage_export_filters(self, payload_version: PayloadVersion):
        date = datetime.fromisocalendar(2019, 11, 1)
        # create data for 3 cameras
        baker.make(
            'passage.PassageHourAggregation',
            camera_id=cycle(range(1, 4)),
            camera_naam=cycle(f'Camera: {i}' for i in range(1, 4)),
            date=date,
            year=date.year,
            week=date.isocalendar()[1],
            hour=1,
            _quantity=100,
        )
        api_version = to_api_version(payload_version)
        url = reverse(f'{api_version}:passage-export')
        response = self.client.get(url,
                                   dict(year=2019, week=12),
                                   HTTP_AUTHORIZATION='Token foo')
        assert response.status_code == 200
        lines = [x for x in response.streaming_content]
        assert len(lines) == 0

        response = self.client.get(url,
                                   dict(year=2019, week=11),
                                   HTTP_AUTHORIZATION='Token foo')
        assert response.status_code == 200
        lines = [x for x in response.streaming_content]

        # Expect the header and 3 lines
        assert len(lines) == 4

        response = self.client.get(url,
                                   dict(year=2019),
                                   HTTP_AUTHORIZATION='Token foo')
        assert response.status_code == 200
        lines = [x for x in response.streaming_content]

        # Expect the header and 3 lines
        assert len(lines) == 4
Esempio n. 29
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# source quarantine data from archival CSV
df_quarantine = pd.read_csv(os.path.join(CSV_FOLDER,
                                         'stats-weekly-archive.csv'),
                            index_col='week')
df_quarantine = df_quarantine[[
    'week.sent_to.quarantine', 'week.src.quarantine'
]]
df_quarantine = df_quarantine.replace({0: None}).astype('Int64')

merged = df_d_1.join(df_d_2).join(df_i_1).join(df_i_2).join(df_i_3).join(
    df_i_4).join(df_quarantine)

week_dates = {'week': [], 'date': [], 'date.to': []}
for x in merged.index:
    year, week = x.split('-')
    week_start = datetime.fromisocalendar(int(year), int(week), 1).date()
    week_end = datetime.fromisocalendar(int(year), int(week), 7).date()
    week_dates['week'].append(x)
    week_dates['date'].append(week_start)
    week_dates['date.to'].append(week_end)
merged = merged.join(pd.DataFrame(data=week_dates).set_index('week'))

merged = merged.reindex(
    [  # sort
        'date', 'date.to', 'week.confirmed', 'week.investigated',
        'week.healthcare', 'week.healthcare.male', 'week.healthcare.female',
        'week.rhoccupant', 'week.loc.family', 'week.loc.work',
        'week.loc.school', 'week.loc.hospital', 'week.loc.otherhc',
        'week.loc.rh', 'week.loc.prison', 'week.loc.transport',
        'week.loc.shop', 'week.loc.restaurant', 'week.loc.sport',
        'week.loc.gathering_private', 'week.loc.gathering_organized',
Esempio n. 30
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wastewater_data = pd.read_csv(
    "https://datagraphics.dckube.scilifelab.se/api/dataset/65f19e61386a4a039aa798010ca42469.csv",
    sep=",",
)
wastewater_data["year"] = (wastewater_data["week"].str[:4]).astype(int)
wastewater_data["week_no"] = wastewater_data["week"].str[-3:]
wastewater_data["week_no"] = wastewater_data["week_no"].str.replace("*", "", regex=True)
wastewater_data["week_no"] = (
    wastewater_data["week_no"].str.replace("-", "", regex=True)
).astype(int)
# set the date to the start of the week (Monday)
wastewater_data["day"] = 1
wastewater_data["date"] = wastewater_data.apply(
    lambda row: dt.fromisocalendar(row["year"], row["week_no"], row["day"]), axis=1
)

# colours for plot
colours = px.colors.diverging.RdBu

# Below sets a dataset for each city. Need to add to it if more places are added
# Will also need to add in a go.Scatter trace in the fig (no change needed to layout)
bromma_wwtp_jarva = wastewater_data[
    (wastewater_data["wwtp"] == "Bromma WWTP, Järva Inlet")
]
bromma_wwtp_riksby = wastewater_data[
    (wastewater_data["wwtp"] == "Bromma WWTP, Riksby Inlet")
]
bromma_wwtp_hasselby = wastewater_data[
    (wastewater_data["wwtp"] == "Bromma WWTP, Hässelby Inlet")