def initialize_main(envDict, caseroot, debugMsg, standalone):
"""initialize_main - initialize settings on rank 0
Arguments:
envDict (dictionary) - environment dictionary
caseroot (string) - case root
debugMsg (object) - vprinter object for printing debugging messages
standalong (boolean) - indicate stand-alone post processing caseroot
Return:
envDict (dictionary) - environment dictionary
"""
# setup envDict['id'] = 'value' parsed from the CASEROOT/[env_file_list] files
env_file_list = ['./env_postprocess.xml', './env_diags_ocn.xml']
envDict = cesmEnvLib.readXML(caseroot, env_file_list)
# debug print out the envDict
debugMsg('envDict after readXML = {0}'.format(envDict), header=True, verbosity=2)
# refer to the caseroot that was specified on the command line instead of what
# is read in the environment as the caseroot may have changed from what is listed
# in the env xml
envDict['CASEROOT'] = caseroot
# add the os.environ['PATH'] to the envDict['PATH']
envDict['OCNDIAG_PATH'] += os.pathsep + os.environ['PATH']
# strip the OCNDIAG_ prefix from the envDict entries before setting the
# enviroment to allow for compatibility with all the diag routine calls
envDict = diagUtilsLib.strip_prefix(envDict, 'OCNDIAG_')
# special variable mapped from the CESM env to the OCN diags env
envDict['RESOLUTION'] = envDict['OCN_GRID']
# setup the TOBSFILE and SOBSFILE variables based on the vertical levels
# 60 (default) or 42
if envDict['VERTICAL'] == '42':
envDict['TOBSFILE'] = envDict['TOBSFILE_V42']
envDict['SOBSFILE'] = envDict['SOBSFILE_V42']
debugMsg('TOBSFILE = {0}, SOBSFILE= {1}'.format(envDict['TOBSFILE'], envDict['SOBSFILE']), header=True, verbosity=2)
# TODO - create the list of necessary climatology files for model
filelist = list()
# check average files
debugMsg('calling checkAvgFiles', header=True, verbosity=2)
rc = diagUtilsLib.checkAvgFiles(filelist)
if not rc:
print('---------------------------------------------------------------------------')
print('ERROR: ocean climatology files do not exist in:')
print(' {0}'.format(envDict['TAVGDIR']))
print('Please run the {0}.ocn_avg_generator script first.'.format(envDict['CASE']))
print('---------------------------------------------------------------------------')
sys.exit(1)
return envDict
def initialize_main(envDict, caseroot, debugMsg, standalone):
"""initialize_main - initialize settings on rank 0
Arguments:
envDict (dictionary) - environment dictionary
caseroot (string) - case root
debugMsg (object) - vprinter object for printing debugging messages
Return:
envDict (dictionary) - environment dictionary
"""
# setup envDict['id'] = 'value' parsed from the CASEROOT/[env_file_list] files
## env_file_list = ['../env_case.xml', '../env_run.xml', '../env_build.xml', '../env_mach_pes.xml', './env_postprocess.xml', './env_diags_atm.xml']
## if standalone:
env_file_list = ['./env_postprocess.xml', './env_diags_atm.xml']
envDict = cesmEnvLib.readXML(caseroot, env_file_list)
# debug print out the envDict
debugMsg('envDict after readXML = {0}'.format(envDict),
header=True,
verbosity=2)
# refer to the caseroot that was specified on the command line instead of what
# is read in the environment as the caseroot may have changed from what is listed
# in the env xml
envDict['CASEROOT'] = caseroot
# add the os.environ['PATH'] to the envDict['PATH']
envDict['ATMDIAG_PATH'] = os.pathsep + os.environ['PATH']
# strip the ATMDIAG_ prefix from the envDict entries before setting the
# enviroment to allow for compatibility with all the diag routine calls
envDict = diagUtilsLib.strip_prefix(envDict, 'ATMDIAG_')
# TODO - create the list of necessary climatology files for model
filelist = list()
# check average files
debugMsg('calling checkAvgFiles', header=True)
rc = diagUtilsLib.checkAvgFiles(filelist)
if not rc:
print(
'---------------------------------------------------------------------------'
)
print('ERROR: atmosphere climatology files do not exist in:')
print(' {0}'.format(envDict['TAVGDIR']))
print('Please run the {0}.atm_avg_generator script first.'.format(
envDict['CASE']))
print(
'---------------------------------------------------------------------------'
)
sys.exit(1)
# TODO - create the list of necessary climatology files for control
return envDict
def initialize_main(envDict, caseroot, debugMsg, standalone):
"""initialize_main - initialize settings on rank 0
Arguments:
envDict (dictionary) - environment dictionary
caseroot (string) - case root
debugMsg (object) - vprinter object for printing debugging messages
standalong (boolean) - indicate stand-alone post processing caseroot
Return:
envDict (dictionary) - environment dictionary
"""
# setup envDict['id'] = 'value' parsed from the CASEROOT/[env_file_list] files
env_file_list = ['./env_postprocess.xml', './env_diags_ocn.xml']
envDict = cesmEnvLib.readXML(caseroot, env_file_list)
# debug print out the envDict
debugMsg('envDict after readXML = {0}'.format(envDict), header=True, verbosity=2)
# refer to the caseroot that was specified on the command line instead of what
# is read in the environment as the caseroot may have changed from what is listed
# in the env xml
envDict['CASEROOT'] = caseroot
# add the os.environ['PATH'] to the envDict['PATH']
envDict['OCNDIAG_PATH'] += os.pathsep + os.environ['PATH']
# strip the OCNDIAG_ prefix from the envDict entries before setting the
# enviroment to allow for compatibility with all the diag routine calls
envDict = diagUtilsLib.strip_prefix(envDict, 'OCNDIAG_')
# special variable mapped from the CESM env to the OCN diags env
envDict['RESOLUTION'] = envDict['OCN_GRID']
# setup the TOBSFILE and SOBSFILE variables based on the vertical levels
# 60 (default) or 42
if envDict['VERTICAL'] == '42':
envDict['TOBSFILE'] = envDict['TOBSFILE_V42']
envDict['SOBSFILE'] = envDict['SOBSFILE_V42']
debugMsg('TOBSFILE = {0}, SOBSFILE= {1}'.format(envDict['TOBSFILE'], envDict['SOBSFILE']), header=True, verbosity=2)
# TODO - create the list of necessary climatology files for model
filelist = list()
# check average files
debugMsg('calling checkAvgFiles', header=True, verbosity=2)
rc = diagUtilsLib.checkAvgFiles(filelist)
if not rc:
print('---------------------------------------------------------------------------')
print('ERROR: ocean climatology files do not exist in:')
print(' {0}'.format(envDict['TAVGDIR']))
print('Please run the {0}.ocn_avg_generator script first.'.format(envDict['CASE']))
print('---------------------------------------------------------------------------')
sys.exit(1)
return envDict
def initialize_main(envDict, caseroot, debugMsg, standalone):
"""initialize_main - initialize settings on rank 0
Arguments:
envDict (dictionary) - environment dictionary
caseroot (string) - case root
debugMsg (object) - vprinter object for printing debugging messages
Return:
envDict (dictionary) - environment dictionary
"""
# setup envDict['id'] = 'value' parsed from the CASEROOT/[env_file_list] files
env_file_list = ['./env_postprocess.xml', './env_diags_atm.xml']
envDict = cesmEnvLib.readXML(caseroot, env_file_list)
# debug print out the envDict
debugMsg('envDict after readXML = {0}'.format(envDict), header=True, verbosity=2)
# refer to the caseroot that was specified on the command line instead of what
# is read in the environment as the caseroot may have changed from what is listed
# in the env xml
envDict['CASEROOT'] = caseroot
# add the os.environ['PATH'] to the envDict['PATH']
envDict['ATMDIAG_PATH'] = os.pathsep + os.environ['PATH']
# strip the ATMDIAG_ prefix from the envDict entries before setting the
# enviroment to allow for compatibility with all the diag routine calls
envDict = diagUtilsLib.strip_prefix(envDict, 'ATMDIAG_')
# TODO - create the list of necessary climatology files for model
filelist = list()
# check average files
debugMsg('calling checkAvgFiles', header=True)
rc = diagUtilsLib.checkAvgFiles(filelist)
if not rc:
print('---------------------------------------------------------------------------')
print('ERROR: atmosphere climatology files do not exist in:')
print(' {0}'.format(envDict['TAVGDIR']))
print('Please run the {0}.atm_avg_generator script first.'.format(envDict['CASE']))
print('---------------------------------------------------------------------------')
sys.exit(1)
# TODO - create the list of necessary climatology files for control
return envDict
def initialize_main(envDict, caseroot, debugMsg, standalone):
"""initialize_main - initialize settings on rank 0
Arguments:
envDict (dictionary) - environment dictionary
caseroot (string) - case root
debugMsg (object) - vprinter object for printing debugging messages
Return:
envDict (dictionary) - environment dictionary
"""
# setup envDict['id'] = 'value' parsed from the CASEROOT/[env_file_list] files
## env_file_list = ['../env_case.xml', '../env_run.xml', '../env_build.xml', '../env_mach_pes.xml', './env_postprocess.xml', './env_diags_ice.xml']
## envDict['STANDALONE'] = False
## if standalone:
env_file_list = ['./env_postprocess.xml', './env_diags_ice.xml']
## envDict['STANDALONE'] = True
envDict = cesmEnvLib.readXML(caseroot, env_file_list)
# debug print out the envDict
debugMsg('envDict after readXML = {0}'.format(envDict), header=True, verbosity=2)
# add the os.environ['PATH'] to the envDict['PATH']
envDict['ICEDIAG_PATH'] = str(os.pathsep + os.environ['PATH'])
# strip the ICEDIAG_ prefix from the envDict entries before setting the
# enviroment to allow for compatibility with all the diag routine calls
envDict = diagUtilsLib.strip_prefix(envDict, 'ICEDIAG_')
# TODO - create the list of necessary climatology files for model
filelist = list()
# check average files
debugMsg('calling checkAvgFiles', header=True)
rc = diagUtilsLib.checkAvgFiles(filelist)
if not rc:
print('---------------------------------------------------------------------------')
print('ERROR: ice climatology files do not exist in:')
print(' {0}'.format(envDict['TAVGDIR']))
print('Please run the {0}.ice_avg_generator script first.'.format(envDict['CASE']))
print('---------------------------------------------------------------------------')
sys.exit(1)
# TODO - create the list of necessary climatology files for control
return envDict
def initialize_main(envDict, caseroot, debugMsg, standalone):
"""initialize_main - initialize settings on rank 0
Arguments:
envDict (dictionary) - environment dictionary
caseroot (string) - case root
debugMsg (object) - vprinter object for printing debugging messages
Return:
envDict (dictionary) - environment dictionary
"""
# setup envDict['id'] = 'value' parsed from the CASEROOT/[env_file_list] files
## env_file_list = ['../env_case.xml', '../env_run.xml', '../env_build.xml', '../env_mach_pes.xml', './env_postprocess.xml', './env_diags_lnd.xml']
## envDict['STANDALONE'] = False
## if standalone:
env_file_list = ['./env_postprocess.xml', './env_diags_lnd.xml']
## envDict['STANDALONE'] = True
envDict = cesmEnvLib.readXML(caseroot, env_file_list)
# debug print out the envDict
debugMsg('envDict after readXML = {0}'.format(envDict), header=True, verbosity=2)
# refer to the caseroot that was specified on the command line instead of what
# is read in the environment as the caseroot may have changed from what is listed
# in the env xml
envDict['CASEROOT'] = caseroot
# add the os.environ['PATH'] to the envDict['PATH']
envDict['LNDDIAG_PATH'] = os.pathsep + os.environ['PATH']
# strip the LNDDIAG_ prefix from the envDict entries before setting the
# enviroment to allow for compatibility with all the diag routine calls
envDict = diagUtilsLib.strip_prefix(envDict, 'LNDDIAG_')
# TODO - create the list of necessary climatology files for model
filelist = list()
# check average files
debugMsg('calling checkAvgFiles', header=True, verbosity=1)
rc = diagUtilsLib.checkAvgFiles(filelist)
if not rc:
print('---------------------------------------------------------------------------')
print('ERROR: land climatology files do not exist')
print('Please run the {0}.lnd_avg_generator script first.'.format(envDict['CASE']))
print('---------------------------------------------------------------------------')
sys.exit(1)
# TODO - create the list of necessary climatology files for control
# setup the working directories
sys.path.append(envDict['PATH'])
# the WKDIR variable is very confusing... it gets reset in setup_workdir
if (envDict['MODEL_VS_MODEL'] == 'True'):
envDict['WKDIR'] = envDict['PTMPDIR_1']+'/diag/'+envDict['caseid_1']+'-'+envDict['caseid_2']+'/'
else:
envDict['WKDIR'] = envDict['PTMPDIR_1']+'/diag/'+envDict['caseid_1']+'-obs/'
if envDict['CASA'] == '1':
envDict['VAR_MASTER'] = envDict['var_master_casa']
else:
envDict['VAR_MASTER'] = envDict['var_master_cn']
return envDict
def initialize_main(envDict, caseroot, debugMsg, standalone):
"""initialize_main - initialize settings on rank 0
Arguments:
envDict (dictionary) - environment dictionary
caseroot (string) - case root
debugMsg (object) - vprinter object for printing debugging messages
Return:
envDict (dictionary) - environment dictionary
"""
# setup envDict['id'] = 'value' parsed from the CASEROOT/[env_file_list] files
## env_file_list = ['../env_case.xml', '../env_run.xml', '../env_build.xml', '../env_mach_pes.xml', './env_postprocess.xml', './env_diags_lnd.xml']
## envDict['STANDALONE'] = False
## if standalone:
env_file_list = ['./env_postprocess.xml', './env_diags_lnd.xml']
## envDict['STANDALONE'] = True
envDict = cesmEnvLib.readXML(caseroot, env_file_list)
# debug print out the envDict
debugMsg('envDict after readXML = {0}'.format(envDict),
header=True,
verbosity=2)
# refer to the caseroot that was specified on the command line instead of what
# is read in the environment as the caseroot may have changed from what is listed
# in the env xml
envDict['CASEROOT'] = caseroot
# add the os.environ['PATH'] to the envDict['PATH']
envDict['LNDDIAG_PATH'] = os.pathsep + os.environ['PATH']
# strip the LNDDIAG_ prefix from the envDict entries before setting the
# enviroment to allow for compatibility with all the diag routine calls
envDict = diagUtilsLib.strip_prefix(envDict, 'LNDDIAG_')
# TODO - create the list of necessary climatology files for model
filelist = list()
# check average files
debugMsg('calling checkAvgFiles', header=True, verbosity=1)
rc = diagUtilsLib.checkAvgFiles(filelist)
if not rc:
print(
'---------------------------------------------------------------------------'
)
print('ERROR: land climatology files do not exist')
print('Please run the {0}.lnd_avg_generator script first.'.format(
envDict['CASE']))
print(
'---------------------------------------------------------------------------'
)
sys.exit(1)
# TODO - create the list of necessary climatology files for control
# setup the working directories
sys.path.append(envDict['PATH'])
# the WKDIR variable is very confusing... it gets reset in setup_workdir
if (envDict['MODEL_VS_MODEL'] == 'True'):
envDict['WKDIR'] = envDict['PTMPDIR_1'] + '/diag/' + envDict[
'caseid_1'] + '-' + envDict['caseid_2'] + '/'
else:
envDict['WKDIR'] = envDict['PTMPDIR_1'] + '/diag/' + envDict[
'caseid_1'] + '-obs/'
if envDict['CASA'] == '1':
envDict['VAR_MASTER'] = envDict['var_master_casa']
else:
envDict['VAR_MASTER'] = envDict['var_master_cn']
return envDict