def test8(self):
string1 = "TAGATCTCGTCTTACTACACGGCGCTCCATATCTGTGAACACATTCCGAATTTGGTCCCTGAACCCCTGGCGAGTAGTAATATATAGTTCCGAATGCTCATAGAAAAAGTAGTGACAAGATTTGTCAATTAGCGTTCCGGCGCCCCGAACAGTTGTAACAAGGCAACCGAATGATGCTATTCACTT | TAGATCTCGTCTTTGGATCGCAATCTGTGACCACATTCAGATAGAGAAATCGGATACGGGGGTAAGTGATAAAATATAGCACCGAAGGCTCAGATTAAAAGTACTGGCAAGATTTATCAATTAGCGTTCCGGTTTATCAGGGGTTGTGTTATCCGACAGACCAAAGTTGGTAACACAGAATTTCACTT"
string2 = "CAATAAAGCTAGCCAGGCAGTACCACGCGCCAGGCCGACGAACATCTGGACGCGCCTTATTCTTGGCTGGCTCAGTGTGATATCTCGAACTACGAACACGGTCATTGAAATATTGCCCAGACTGTAAGTCCGGACCCGGTGGCTCCGTCGGGTGACGCTCGCTTGTACTCGTGCGTGGTAATAAGTTTTGGGGGACTCACGAAGCGTCCGCC | CAAACGGCGGTCCCTAAAGCGTGGCAGTCAGTAATTCGCGTCCGACCCCTAACTTACGGCGTATAGCGGGCCTCCTGCCTCGGCAGTGTGTTATCTCGAACTTCTAACACATCAGCGAGACTCACGCTCGCAGTACCTTTAGCTATGGCATCCCTCGGCTCCGTCGTGTTATGCTCGGGTGCAGCGCCGCC"
string3 = "ACGTAATTGTCATGTTGTCGGGCATAAGCTTCCTGTGAGCTCACGGCATTTCCTCATCGTCTTTGAAGAGTGCTCTCAGTTAACATGGGGTTGGTCCCTTGCCTGCAACCGCGTAGTTAAACAGGTGGAATAAAGATGCGCAAATATGGTTCCCCTCGGCTGCTCGGCTGGCCCTTGCTACCCGCTGATGGGTCGCATGGTAACGC | ACGTAATCGTCAAGCATTTAATGCGCCTGTGAGCTCACCAAGATTATGTCATCGTCTGTGTACTCTCAGTTGGGATGTACTATCGGCGAACGTTCCTGCCAGGCCTTTGTCCAAGAAATTACCTAAAATGTTCAACATGGGCTTGGTCCCTAGACTGCAACCTCGTAGTTAAACAGGCGGAATATATGGCAATCTACCAGTGCTCGACTGGTAAGGA"
strings = [string1, string2, string3]
answers = []
expanswers = [1,1,1]
for string in strings:
parts = string.split("|")
partA = d.clean(parts[0])
partB = d.clean(parts[1])
if len(partA)>len(partB):
partA, partB = partB, partA
for i in range(len(partA)):
pA = partA[:i]
pB = partB[:i]
start = time.time()
answer = d.score(pA, pB)
duration = time.time()-start
print("{0} | {1} | {2} | {3}| {4}".format(i,duration, answer, pA, pB,))
def test6(self):
self.assertEqual(d.score("G","GA"),(0-5))
def test5(self):
self.assertEqual(d.score("",""),0)
def test4(self):
self.assertEqual(d.score("GCATGCT","GATTACA"),(0-3))
def test3(self):
self.assertEqual(d.score("GAAAAAAT", "GAAT"),1)
def test2(self):
self.assertEqual(d.score("G","G"),3)
