def search(search_id):
search_url = flask.url_for('search', search_id=search_id)
tag_url = flask.url_for('tag', search_id=search_id)
try:
search = doi.get_search(search_id)
except ValueError:
flask.abort(404)
projects = doi.get_all_projects()
if flask.request.method == 'GET':
return flask.render_template('search_search.tmpl',
script_root=flask.request.script_root,
search=search,
projects=projects,
post_url=search_url,
tag_url=tag_url,
error=None)
excludes = []
includes = []
for name in flask.request.form.keys():
if name.startswith('exclude_'):
excludes.append(doi.get_image(name[8:]))
if name.startswith('include_'):
includes.append(doi.get_image(name[8:]))
search.refine(excludes, includes, strict=False)
return flask.render_template('search_search.tmpl',
script_root=flask.request.script_root,
search=search,
projects=projects,
post_url=search_url,
tag_url=tag_url,
error=None)
def tag(search_id):
search_url = flask.url_for('search', search_id=search_id)
tag_url = flask.url_for('tag', search_id=search_id)
try:
search = doi.get_search(search_id)
except ValueError:
flask.abort(404)
res_dict = tag_dict_defaults
if flask.request.method == 'GET':
return flask.render_template('search_tag.tmpl',
script_root=flask.request.script_root,
search=search,
post_url=tag_url,
search_url=search_url,
tag_form_dict=res_dict,
error=None)
res_dict = parse_tag(flask.request.form)
if res_dict['status'] == 200:
if res_dict['pubmed_id']:
pubmed_id = res_dict['pubmed_id']
else:
pubmed_id = None
if res_dict['publication_doi']:
publication_doi = res_dict['publication_doi']
else:
publication_doi = None
if res_dict['authors']:
authors = res_dict['authors']
else:
authors = None
if res_dict['funder']:
funder = res_dict['funder']
else:
funder = None
if search.collection.identifier:
# if this has been tagged with a test DOI but now needs to be made
# real
if search.collection.doi.is_test and not res_dict['test']:
search.collection.untag(update_others_flag=False)
if search.collection.identifier:
search.collection.add_info(res_dict['description'],
pubmed_id,
publication_doi,
authors,
funder)
else:
description = res_dict['description']
search.collection.tag(description,
pubmed_id,
publication_doi,
authors,
funder,
update_others_flag=False,
test_flag=res_dict['test'])
fmt = 'http://iaf.virtualbrain.org/lp/%s'
url = fmt % search.collection.doi.identifier
return flask.redirect(url)
error = res_dict['error']
return flask.render_template('search_tag.tmpl',
script_root=flask.request.script_root,
search=search,
post_url=tag_url,
search_url=search_url,
tag_form_dict=res_dict,
error=error)
