Esempi in Python per EmmaaModel.update_to_ndex

Esempio n. 1

File: priors_from_muts.py Progetto: indralab/emmaa

def upload_prior(ctype, config, gene_names):
    fname = f'../models/{ctype}/prior_stmts.pkl'
    with open(fname, 'rb') as fh:
        stmts = pickle.load(fh)
    estmts = get_emmaa_statements(stmts, gene_names)
    model = EmmaaModel(ctype, config)
    model.add_statements(estmts)
    model.update_to_ndex()

Esempio n. 2

def upload_prior(ctype, config):
    fname = f'../models/{ctype}/prior_stmts.pkl'
    with open(fname, 'rb') as fh:
        stmts = pickle.load(fh)
    estmts = [
        EmmaaStatement(stmt, datetime.datetime.now(), []) for stmt in stmts
    ]
    model = EmmaaModel(ctype, config)
    model.add_statements(estmts)
    model.update_to_ndex()