print '-' * 80 from fasta import FastaFile f = FastaFile('HSP100.fa') rule() print 'readOne' print f.readOne() print f.readOne() rule() print 'readAll' print f.readAll() rule() print 'Mapping' f.asMapping() print f rule() rule() f = FastaFile('HSP100.fa', indexed=True, interface='container') print "Iteration" i = 0 for h, s in f: print h, s i += 1 if i == 4: break print '---'
print '-'*80 from fasta import FastaFile f = FastaFile('HSP100.fa') rule() print 'readOne' print f.readOne() print f.readOne() rule() print 'readAll' print f.readAll() rule() print 'Mapping' f.asMapping() print f rule() rule() f = FastaFile('HSP100.fa', indexed=True, interface='container') print "Iteration" i = 0 for h,s in f: print h,s i += 1 if i==4: break print '---'