def test_find_rois_for_plane(self, projection):
def getIds(objs, robject=True):
if robject:
return sorted(unwrap(o.getId()) for o in objs)
return sorted(objs)
im = self.create_image()
iid = unwrap(im.getId())
r1 = utils.create_roi_for_plane(
self.sess, unwrap(im.getId()), 2, 3, 4, robject=True)
r2 = utils.create_roi_for_plane(
self.sess, unwrap(im.getId()), 2, 4, 6, robject=True)
r3 = utils.create_roi_for_plane(
self.sess, unwrap(im.getId()), 2, 4, 8, robject=True)
r3.getShape(0).setWidth(rdouble(1))
r3 = self.sess.getUpdateService().saveAndReturnObject(r3)
r4 = utils.create_roi_for_plane(
self.sess, unwrap(im.getId()), 2, 4, 8, robject=True)
r4.addShape(omero.model.RectI())
r4 = self.sess.getUpdateService().saveAndReturnObject(r4)
rs = utils.find_rois_for_plane(self.sess, iid=iid, z=1000)
assert rs == []
rs = utils.find_rois_for_plane(
self.sess, iid=iid, fullplane=True, projection=projection)
assert getIds(rs, not projection) == getIds([r1, r2])
rs = utils.find_rois_for_plane(
self.sess, iid=iid, singleshape=False, projection=projection)
assert getIds(rs, not projection) == getIds([r1, r2, r4])
rs = utils.find_rois_for_plane(
self.sess, iid=iid, fullplane=False, projection=projection)
assert getIds(rs, not projection) == getIds([r1, r2, r3])
rs = utils.find_rois_for_plane(
self.sess, iid=iid, c=4, fullplane=False, singleshape=False,
projection=projection)
assert getIds(rs, not projection) == getIds([r2, r3, r4])
def test_create_roi_for_plane(self, robject):
im = self.create_image()
r = utils.create_roi_for_plane(
self.sess, unwrap(im.getId()), 2, 4, 6, robject=robject)
if not robject:
p = omero.sys.ParametersI()
p.addId(r)
r = self.sess.getQueryService().findByQuery(
'FROM Roi r JOIN FETCH r.shapes where r.id=:id', p)
assert r.getImage().getId() == im.getId()
assert r.sizeOfShapes() == 1
s = r.getShape(0)
assert unwrap(s.getX()) == 0
assert unwrap(s.getY()) == 0
assert unwrap(s.getWidth()) == 4
assert unwrap(s.getHeight()) == 5
assert unwrap(s.getTheZ()) == 2
assert unwrap(s.getTheC()) == 4
assert unwrap(s.getTheT()) == 6