def fromPath(cls, basePath=".", machineName=None, param=None, origSpec=None, fitFunc=None, t=None, execTime=None):
if param == None:
dicaData = fileio.dicafile(os.path.join(basePath, "dica.dat")).read_data()
compData = fileio.compfile(os.path.join(basePath, "comp.ind")).read_data()
dica = paramMod.dica(dicaData, mode="fromPath", t=t)
comp = paramMod.comp(compData, t=dica["t"])
param = paramMod.param(initDica=dica, initComp=comp)
aSpecPath = os.path.join(basePath, "spct.dat")
try:
aSpec = spectrum(aSpecPath, usecols=(0, 2))
sbib = fileio.sbibfile(os.path.join(basePath, "sbib.dat")).read_data()
llist = sbib["llist"]
wParams = fileio.ststfile(os.path.join(basePath, "stst.dat")).getWParams()
specFlag = 0
except:
print "Creating fake Spectrum @%s" % basePath
aSpec = spectrum(zip(np.linspace(2000, 20000, 20), range(1, 21)))
sbib = {"llist": []}
llist = sbib["llist"]
wParams = []
specFlag = -1
log = list(file(os.path.join(basePath, "fica.log")))
# error=list(file(os.path.join(basePath,'error.log')))
if wParams != []:
w = wParams[-1][0][-1]
else:
w = -1
return cls(
aSpec,
param,
w,
machineName=None,
execTime=execTime,
wParam=wParams,
error=None,
ficaLog=log,
llist=llist,
origSpec=origSpec,
specFlag=specFlag,
fitFunc=fitFunc,
)
def getHistLList(id):
sbib=fileio.sbibfile('hist/sbib.bak%04d'%id).read_data()
return sbib['llist']
