Esempio n. 1
0
def test_view_graph_does_non_dummy_bundles_first():
    """It's important to do bundles that don't require adding dummy nodes first, so
    when it comes to return loops, they are better placed."""
    nodes = {
        'a': ProcessGroup(selection=('a', )),
        'b': ProcessGroup(selection=('b', )),
        'c': ProcessGroup(selection=('c', )),
        'd': ProcessGroup(selection=('d', )),
    }
    order = [[['a', 'c']], [['b', 'd']]]
    bundles = [
        Bundle('a', 'b'),
        Bundle('c', 'd'),
        Bundle('b', 'a'),
    ]
    G = view_graph(SankeyDefinition(nodes, bundles, order))

    assert G.ordering == Ordering([
        [['a', '__b_a_0', 'c']],
        [['b', '__b_a_1', 'd']],
    ])

    # order of bundles doesn't affect it
    G2 = view_graph(SankeyDefinition(nodes, bundles[::-1], order))
    assert G2.ordering == G.ordering
Esempio n. 2
0
def test_view_graph_does_short_bundles_last():
    """Return loops are inserted immediately below the source node, so work from
    the outside in."""
    #
    #  ,a -- b -- c-,
    #  |      `----`|
    #   `-----------'
    #
    nodes = {
        'a': ProcessGroup(selection=('a', )),
        'b': ProcessGroup(selection=('b', )),
        'c': ProcessGroup(selection=('c', )),
    }
    order = [[['a']], [['b']], [['c']]]
    bundles = [
        Bundle('a', 'b'),
        Bundle('b', 'c'),
        Bundle('c', 'b'),
        Bundle('c', 'a'),
    ]
    G = view_graph(SankeyDefinition(nodes, bundles, order))

    assert G.ordering == Ordering([
        [['a', '__c_a_0']],
        [['b', '__c_b_1', '__c_a_1']],
        [['c', '__c_b_2', '__c_a_2']],
    ])

    # order of bundles doesn't affect it
    G2 = view_graph(SankeyDefinition(nodes, bundles[::-1], order))
    assert G.ordering == G2.ordering
def test_augment_waypoint_alignment():
    # j -- a -- x
    #      b
    # k -- c -- y
    #
    # should insert "from b" betwen x and y
    # and "to b" between j and k
    G = LayeredGraph()
    G.add_nodes_from([
        ('a', {'node': ProcessGroup()}),
        ('b', {'node': ProcessGroup(selection=['b1'])}),
        ('c', {'node': ProcessGroup()}),
        ('x', {'node': ProcessGroup()}),
        ('y', {'node': ProcessGroup()}),
        ('j', {'node': ProcessGroup()}),
        ('k', {'node': ProcessGroup()}),
    ])
    G.add_edges_from([
        ('a', 'x', {'bundles': [2]}),
        ('k', 'c', {'bundles': [1]}),
        ('j', 'a', {'bundles': [0]}),
        ('c', 'y', {'bundles': [3]}),
    ])
    G.ordering = Ordering([[['j', 'k']], [['a', 'b', 'c']], [['x', 'y']]])

    new_waypoints = {
        'from b': Waypoint(),
        'to b': Waypoint(),
    }
    new_bundles = {
        'b>': Bundle('b', Elsewhere, waypoints=['from b']),
        '>b': Bundle(Elsewhere, 'b', waypoints=['to b']),
    }

    G2 = augment(G, new_waypoints, new_bundles)

    assert set(G2.nodes()).difference(G.nodes()) == {'from b', 'to b'}
    assert G2.ordering == Ordering([
        [['j', 'to b', 'k']], [['a', 'b', 'c']], [['x', 'from b', 'y']]
    ])
Esempio n. 4
0
def test_view_graph_adds_waypoints():
    nodes = {
        'n1': ProcessGroup(selection=['n1']),
        'n2': ProcessGroup(selection=['n2']),
        'w1': Waypoint(),
    }
    bundles = [
        Bundle('n1', 'n2', waypoints=['w1']),
    ]
    order0 = [['n1'], [], ['w1'], [], [], ['n2']]
    G = view_graph(SankeyDefinition(nodes, bundles, order0))

    assert sorted(nodes_ignoring_elsewhere(G, data=True)) == [
        ('__n1_w1_1', {
            'node': Waypoint(title='')
        }),
        ('__w1_n2_3', {
            'node': Waypoint(title='')
        }),
        ('__w1_n2_4', {
            'node': Waypoint(title='')
        }),
        ('n1', {
            'node': ProcessGroup(selection=['n1'])
        }),
        ('n2', {
            'node': ProcessGroup(selection=['n2'])
        }),
        ('w1', {
            'node': Waypoint()
        }),
    ]
    assert sorted(edges_ignoring_elsewhere(G, data=True)) == [
        ('__n1_w1_1', 'w1', {
            'bundles': [0]
        }),
        ('__w1_n2_3', '__w1_n2_4', {
            'bundles': [0]
        }),
        ('__w1_n2_4', 'n2', {
            'bundles': [0]
        }),
        ('n1', '__n1_w1_1', {
            'bundles': [0]
        }),
        ('w1', '__w1_n2_3', {
            'bundles': [0]
        }),
    ]
    assert G.ordering == Ordering([[['n1']], [['__n1_w1_1']], [['w1']],
                                   [['__w1_n2_3']], [['__w1_n2_4']], [['n2']]])
Esempio n. 5
0
def test_view_graph_does_not_mutate_definition():
    nodes = {
        'n1': ProcessGroup(selection=['n1']),
        'n2': ProcessGroup(selection=['n2']),
    }
    bundles = [
        Bundle('n1', 'n2'),
    ]
    order0 = [['n1'], [], ['n2']]
    vd = SankeyDefinition(nodes, bundles, order0)
    G = view_graph(vd)
    assert vd.nodes == {
        'n1': ProcessGroup(selection=['n1']),
        'n2': ProcessGroup(selection=['n2']),
    }
    assert vd.bundles == {
        0: Bundle('n1', 'n2'),
    }
    assert vd.ordering == Ordering([[['n1']], [[]], [['n2']]])
Esempio n. 6
0
def test_weave_results():
    nodes = {
        'a':
        ProcessGroup(selection=['a1', 'a2']),
        'b':
        ProcessGroup(selection=['b1']),
        'c':
        ProcessGroup(selection=['c1', 'c2'],
                     partition=Partition.Simple('process', ['c1', 'c2'])),
        'via':
        Waypoint(partition=Partition.Simple('material', ['m', 'n'])),
    }
    bundles = [
        Bundle('a', 'c', waypoints=['via']),
        Bundle('b', 'c', waypoints=['via']),
    ]
    ordering = [[['a', 'b']], [['via']], [['c']]]
    sdd = SankeyDefinition(nodes, bundles, ordering)

    # Dataset
    flows = pd.DataFrame.from_records([
        ('a1', 'c1', 'm', 3),
        ('a2', 'c1', 'n', 1),
        ('b1', 'c1', 'm', 1),
        ('b1', 'c2', 'm', 2),
        ('b1', 'c2', 'n', 1),
    ],
                                      columns=('source', 'target', 'material',
                                               'value'))
    dim_process = pd.DataFrame({
        'id':
        list(flows.source.unique()) + list(flows.target.unique())
    }).set_index('id')
    dataset = Dataset(flows, dim_process)

    result = weave(sdd, dataset)

    def link(src, tgt, original_flows, value, link_type='*', color='#FBB4AE'):
        return SankeyLink(source=src,
                          target=tgt,
                          type=link_type,
                          time='*',
                          data={'value': value},
                          title=link_type,
                          color=color,
                          original_flows=original_flows)

    assert set(n.id for n in result.nodes) == {
        'a^*', 'b^*', 'via^m', 'via^n', 'c^c1', 'c^c2'
    }

    assert sorted(result.links) == [
        link('a^*', 'via^m', [0], 3),
        link('a^*', 'via^n', [1], 1),
        link('b^*', 'via^m', [2, 3], 3),
        link('b^*', 'via^n', [4], 1),
        link('via^m', 'c^c1', [0, 2], 4),
        link('via^m', 'c^c2', [3], 2),
        link('via^n', 'c^c1', [1], 1),
        link('via^n', 'c^c2', [4], 1),
    ]

    assert result.ordering == Ordering([
        [['a^*', 'b^*']],
        [['via^m', 'via^n']],
        [['c^c1', 'c^c2']],
    ])

    assert result.groups == [
        {
            'id': 'via',
            'title': '',
            'type': 'group',
            'nodes': ['via^m', 'via^n']
        },
        {
            'id': 'c',
            'title': '',
            'type': 'process',
            'nodes': ['c^c1', 'c^c2']
        },
    ]

    # Can also set flow_partition for all bundles at once
    sdd2 = SankeyDefinition(nodes,
                            bundles,
                            ordering,
                            flow_partition=Partition.Simple(
                                'material', ['m', 'n']))

    scale = CategoricalScale('type', palette=['red', 'blue'])
    scale.set_domain(['m', 'n'])
    result = weave(sdd2, dataset, link_color=scale)

    assert sorted(result.links) == [
        link('a^*', 'via^m', [0], 3, 'm', 'red'),
        link('a^*', 'via^n', [1], 1, 'n', 'blue'),
        link('b^*', 'via^m', [2, 3], 3, 'm', 'red'),
        link('b^*', 'via^n', [4], 1, 'n', 'blue'),
        link('via^m', 'c^c1', [0, 2], 4, 'm', 'red'),
        link('via^m', 'c^c2', [3], 2, 'm', 'red'),
        link('via^n', 'c^c1', [1], 1, 'n', 'blue'),
        link('via^n', 'c^c2', [4], 1, 'n', 'blue'),
    ]