def test_container():
container = actor.Container()
axes = actor.axes()
container.add(axes)
npt.assert_equal(len(container), 1)
npt.assert_equal(container.GetBounds(), axes.GetBounds())
npt.assert_equal(container.GetCenter(), axes.GetCenter())
npt.assert_equal(container.GetLength(), axes.GetLength())
container.clear()
npt.assert_equal(len(container), 0)
container.add(axes)
container_shallow_copy = shallow_copy(container)
container_shallow_copy.add(actor.axes())
assert_greater(len(container_shallow_copy), len(container))
npt.assert_equal(container_shallow_copy.GetPosition(),
container.GetPosition())
npt.assert_equal(container_shallow_copy.GetVisibility(),
container.GetVisibility())
# Check is the shallow_copy do not modify original container
container_shallow_copy.SetVisibility(False)
npt.assert_equal(container.GetVisibility(), True)
container_shallow_copy.SetPosition((1, 1, 1))
npt.assert_equal(container.GetPosition(), (0, 0, 0))
def test_rotate(interactive=False):
A = np.zeros((50, 50, 50))
A[20:30, 20:30, 10:40] = 100
act = actor.contour_from_roi(A)
scene = window.Scene()
scene.add(act)
if interactive:
window.show(scene)
else:
arr = window.snapshot(scene, offscreen=True)
red = arr[..., 0].sum()
red_sum = np.sum(red)
act2 = utils.shallow_copy(act)
rot = (90, 1, 0, 0)
rotate(act2, rot)
act3 = utils.shallow_copy(act)
scene.add(act2)
rot = (90, 0, 1, 0)
rotate(act3, rot)
scene.add(act3)
scene.add(actor.axes())
if interactive:
window.show(scene)
else:
arr = window.snapshot(scene, offscreen=True)
red_sum_new = arr[..., 0].sum()
npt.assert_equal(red_sum_new > red_sum, True)
def test_grid_ui1(interactive=False):
vol1 = np.zeros((100, 100, 100))
vol1[25:75, 25:75, 25:75] = 100
colors = distinguishable_colormap(nb_colors=3)
contour_actor1 = actor.contour_from_roi(vol1, np.eye(4), colors[0], 1.)
vol2 = np.zeros((100, 100, 100))
vol2[25:75, 25:75, 25:75] = 100
contour_actor2 = actor.contour_from_roi(vol2, np.eye(4), colors[1], 1.)
vol3 = np.zeros((100, 100, 100))
vol3[25:75, 25:75, 25:75] = 100
contour_actor3 = actor.contour_from_roi(vol3, np.eye(4), colors[2], 1.)
scene = window.Scene()
actors = []
texts = []
actors.append(contour_actor1)
text_actor1 = actor.text_3d('cube 1', justification='center')
texts.append(text_actor1)
actors.append(contour_actor2)
text_actor2 = actor.text_3d('cube 2', justification='center')
texts.append(text_actor2)
actors.append(contour_actor3)
text_actor3 = actor.text_3d('cube 3', justification='center')
texts.append(text_actor3)
actors.append(shallow_copy(contour_actor1))
text_actor1 = actor.text_3d('cube 4', justification='center')
texts.append(text_actor1)
actors.append(shallow_copy(contour_actor2))
text_actor2 = actor.text_3d('cube 5', justification='center')
texts.append(text_actor2)
actors.append(shallow_copy(contour_actor3))
text_actor3 = actor.text_3d('cube 6', justification='center')
texts.append(text_actor3)
actors.append(shallow_copy(contour_actor1))
text_actor1 = actor.text_3d('cube 7', justification='center')
texts.append(text_actor1)
actors.append(shallow_copy(contour_actor2))
text_actor2 = actor.text_3d('cube 8', justification='center')
texts.append(text_actor2)
actors.append(shallow_copy(contour_actor3))
text_actor3 = actor.text_3d('cube 9', justification='center')
texts.append(text_actor3)
counter = itertools.count()
show_m = window.ShowManager(scene)
show_m.initialize()
def timer_callback(_obj, _event):
nonlocal show_m, counter
cnt = next(counter)
show_m.scene.zoom(1)
show_m.render()
if cnt == 10:
show_m.exit()
# show the grid with the captions
grid_ui = ui.GridUI(actors=actors,
captions=texts,
caption_offset=(0, -50, 0),
cell_padding=(60, 60),
dim=(3, 3),
rotation_axis=(1, 0, 0))
scene.add(grid_ui)
show_m.add_timer_callback(True, 200, timer_callback)
show_m.start()
arr = window.snapshot(scene)
report = window.analyze_snapshot(arr)
npt.assert_equal(report.objects > 9, True)
def test_grid_ui2(interactive=False):
vol1 = np.zeros((100, 100, 100))
vol1[25:75, 25:75, 25:75] = 100
colors = distinguishable_colormap(nb_colors=3)
contour_actor1 = actor.contour_from_roi(vol1, np.eye(4), colors[0], 1.)
vol2 = np.zeros((100, 100, 100))
vol2[25:75, 25:75, 25:75] = 100
contour_actor2 = actor.contour_from_roi(vol2, np.eye(4), colors[1], 1.)
vol3 = np.zeros((100, 100, 100))
vol3[25:75, 25:75, 25:75] = 100
contour_actor3 = actor.contour_from_roi(vol3, np.eye(4), colors[2], 1.)
scene = window.Scene()
actors = []
texts = []
actors.append(contour_actor1)
text_actor1 = actor.text_3d('cube 1', justification='center')
texts.append(text_actor1)
actors.append(contour_actor2)
text_actor2 = actor.text_3d('cube 2', justification='center')
texts.append(text_actor2)
actors.append(contour_actor3)
text_actor3 = actor.text_3d('cube 3', justification='center')
texts.append(text_actor3)
actors.append(shallow_copy(contour_actor1))
text_actor1 = actor.text_3d('cube 4', justification='center')
texts.append(text_actor1)
actors.append(shallow_copy(contour_actor2))
text_actor2 = actor.text_3d('cube 5', justification='center')
texts.append(text_actor2)
actors.append(shallow_copy(contour_actor3))
text_actor3 = actor.text_3d('cube 6', justification='center')
texts.append(text_actor3)
actors.append(shallow_copy(contour_actor1))
text_actor1 = actor.text_3d('cube 7', justification='center')
texts.append(text_actor1)
actors.append(shallow_copy(contour_actor2))
text_actor2 = actor.text_3d('cube 8', justification='center')
texts.append(text_actor2)
actors.append(shallow_copy(contour_actor3))
text_actor3 = actor.text_3d('cube 9', justification='center')
texts.append(text_actor3)
# this needs to happen automatically when start() ends.
# for act in actors:
# act.RemoveAllObservers()
filename = "test_grid_ui"
recording_filename = pjoin(DATA_DIR, filename + ".log.gz")
expected_events_counts_filename = pjoin(DATA_DIR, filename + ".json")
current_size = (900, 600)
scene = window.Scene()
show_manager = window.ShowManager(scene,
size=current_size,
title="FURY GridUI")
show_manager.initialize()
grid_ui2 = ui.GridUI(actors=actors,
captions=texts,
caption_offset=(0, -50, 0),
cell_padding=(60, 60),
dim=(3, 3),
rotation_axis=None)
scene.add(grid_ui2)
event_counter = EventCounter()
event_counter.monitor(grid_ui2)
if interactive:
show_manager.start()
recording = False
if recording:
# Record the following events
# 1. Left click on top left box (will rotate the box)
show_manager.record_events_to_file(recording_filename)
# print(list(event_counter.events_counts.items()))
event_counter.save(expected_events_counts_filename)
else:
show_manager.play_events_from_file(recording_filename)
expected = EventCounter.load(expected_events_counts_filename)
event_counter.check_counts(expected)
def test_grid_ui(interactive=False):
vol1 = np.zeros((100, 100, 100))
vol1[25:75, 25:75, 25:75] = 100
colors = distinguishable_colormap(nb_colors=3)
contour_actor1 = actor.contour_from_roi(vol1, np.eye(4),
colors[0], 1.)
vol2 = np.zeros((100, 100, 100))
vol2[25:75, 25:75, 25:75] = 100
contour_actor2 = actor.contour_from_roi(vol2, np.eye(4),
colors[1], 1.)
vol3 = np.zeros((100, 100, 100))
vol3[25:75, 25:75, 25:75] = 100
contour_actor3 = actor.contour_from_roi(vol3, np.eye(4),
colors[2], 1.)
scene = window.Scene()
actors = []
texts = []
actors.append(contour_actor1)
text_actor1 = actor.text_3d('cube 1', justification='center')
texts.append(text_actor1)
actors.append(contour_actor2)
text_actor2 = actor.text_3d('cube 2', justification='center')
texts.append(text_actor2)
actors.append(contour_actor3)
text_actor3 = actor.text_3d('cube 3', justification='center')
texts.append(text_actor3)
actors.append(shallow_copy(contour_actor1))
text_actor1 = actor.text_3d('cube 4', justification='center')
texts.append(text_actor1)
actors.append(shallow_copy(contour_actor2))
text_actor2 = actor.text_3d('cube 5', justification='center')
texts.append(text_actor2)
actors.append(shallow_copy(contour_actor3))
text_actor3 = actor.text_3d('cube 6', justification='center')
texts.append(text_actor3)
actors.append(shallow_copy(contour_actor1))
text_actor1 = actor.text_3d('cube 7', justification='center')
texts.append(text_actor1)
actors.append(shallow_copy(contour_actor2))
text_actor2 = actor.text_3d('cube 8', justification='center')
texts.append(text_actor2)
actors.append(shallow_copy(contour_actor3))
text_actor3 = actor.text_3d('cube 9', justification='center')
texts.append(text_actor3)
counter = itertools.count()
show_m = window.ShowManager(scene)
show_m.initialize()
def timer_callback(_obj, _event):
cnt = next(counter)
show_m.scene.zoom(1)
show_m.render()
if cnt == 10:
show_m.exit()
show_m.destroy_timers()
# show the grid with the captions
grid_ui = ui.GridUI(actors=actors, captions=texts,
caption_offset=(0, -50, 0),
cell_padding=(60, 60), dim=(3, 3),
rotation_axis=(1, 0, 0))
scene.add(grid_ui)
show_m.add_timer_callback(True, 200, timer_callback)
show_m.start()
arr = window.snapshot(scene)
report = window.analyze_snapshot(arr)
npt.assert_equal(report.objects > 9, True)
# this needs to happen automatically when start() ends.
for act in actors:
act.RemoveAllObservers()
filename = "test_grid_ui"
recording_filename = pjoin(DATA_DIR, filename + ".log.gz")
expected_events_counts_filename = pjoin(DATA_DIR, filename + ".json")
current_size = (900, 600)
scene = window.Scene()
show_manager = window.ShowManager(scene,
size=current_size,
title="FURY GridUI")
show_manager.initialize()
grid_ui2 = ui.GridUI(actors=actors, captions=texts,
caption_offset=(0, -50, 0),
cell_padding=(60, 60), dim=(3, 3),
rotation_axis=None)
scene.add(grid_ui2)
event_counter = EventCounter()
event_counter.monitor(grid_ui2)
if interactive:
show_manager.start()
recording = False
if recording:
# Record the following events
# 1. Left click on top left box (will rotate the box)
show_manager.record_events_to_file(recording_filename)
# print(list(event_counter.events_counts.items()))
event_counter.save(expected_events_counts_filename)
else:
show_manager.play_events_from_file(recording_filename)
expected = EventCounter.load(expected_events_counts_filename)
event_counter.check_counts(expected)
def test_grid(_interactive=False):
vol1 = np.zeros((100, 100, 100))
vol1[25:75, 25:75, 25:75] = 100
contour_actor1 = actor.contour_from_roi(vol1, np.eye(4),
(1., 0, 0), 1.)
vol2 = np.zeros((100, 100, 100))
vol2[25:75, 25:75, 25:75] = 100
contour_actor2 = actor.contour_from_roi(vol2, np.eye(4),
(1., 0.5, 0), 1.)
vol3 = np.zeros((100, 100, 100))
vol3[25:75, 25:75, 25:75] = 100
contour_actor3 = actor.contour_from_roi(vol3, np.eye(4),
(1., 0.5, 0.5), 1.)
scene = window.Scene()
actors = []
texts = []
actors.append(contour_actor1)
text_actor1 = actor.text_3d('cube 1', justification='center')
texts.append(text_actor1)
actors.append(contour_actor2)
text_actor2 = actor.text_3d('cube 2', justification='center')
texts.append(text_actor2)
actors.append(contour_actor3)
text_actor3 = actor.text_3d('cube 3', justification='center')
texts.append(text_actor3)
actors.append(shallow_copy(contour_actor1))
text_actor1 = 'cube 4'
texts.append(text_actor1)
actors.append(shallow_copy(contour_actor2))
text_actor2 = 'cube 5'
texts.append(text_actor2)
actors.append(shallow_copy(contour_actor3))
text_actor3 = 'cube 6'
texts.append(text_actor3)
# show the grid without the captions
container = grid(actors=actors, captions=None,
caption_offset=(0, -40, 0),
cell_padding=(10, 10), dim=(2, 3))
scene.add(container)
scene.projection('orthogonal')
counter = itertools.count()
show_m = window.ShowManager(scene)
show_m.initialize()
def timer_callback(_obj, _event):
nonlocal counter
cnt = next(counter)
# show_m.scene.zoom(1)
show_m.render()
if cnt == 5:
show_m.exit()
# show_m.destroy_timers()
show_m.add_timer_callback(True, 200, timer_callback)
show_m.start()
arr = window.snapshot(scene)
arr[arr < 100] = 0
report = window.analyze_snapshot(arr)
npt.assert_equal(report.objects, 6)
scene.rm_all()
counter = itertools.count()
show_m = window.ShowManager(scene)
show_m.initialize()
# show the grid with the captions
container = grid(actors=actors, captions=texts,
caption_offset=(0, -50, 0),
cell_padding=(10, 10),
dim=(3, 3))
scene.add(container)
show_m.add_timer_callback(True, 200, timer_callback)
show_m.start()
arr = window.snapshot(scene)
report = window.analyze_snapshot(arr)
npt.assert_equal(report.objects > 6, True)
