def test_describe_get_tissue_expression_unknown():
"""Check that an unknown gene raises an error from get_tissue_expression."""
gene_name = 'foo'
desc = describe.Describer(identifier='symbol')
try:
expression = desc.get_tissue_expression(gene_name)
except KeyError:
return
assert False
def test_describe_construct():
"""Try to construct a Describer object."""
desc = describe.Describer(identifier='symbol')
desc.close()
def test_describe_get_gene_info():
"""Try to get name and GO info for a given gene."""
gene_name = 'TP53'
desc = describe.Describer(identifier='symbol')
gene_info = desc.get_gene_info(gene_name)
def test_describe_get_tissue_expression():
"""Try to get the tissue expression statistics for a given gene."""
gene_name = 'TP53'
desc = describe.Describer(identifier='symbol')
expression = desc.get_tissue_expression(gene_name)