class DesignLoggerGID(DesignLogger):
# --------------------------------------------------------------------------
def __init__(self, model_part_controller, optimization_settings):
self.output_settings = optimization_settings["output"]
minimal_gid_settings = Parameters("""
{
"name" : "gid",
"gid_configuration" : {
"result_file_configuration" : {
"gidpost_flags" : { }
}
}
}""")
output_format = self.output_settings["output_format"]
if not output_format.Has("gid_configuration"):
output_format.AddValue("gid_configuration",
minimal_gid_settings["gid_configuration"])
gid_configuration = output_format["gid_configuration"]
if not gid_configuration.Has("result_file_configuration"):
gid_configuration.AddValue(
"result_file_configuration",
minimal_gid_settings["gid_configuration"]
["result_file_configuration"])
self.optimization_model_part = model_part_controller.GetOptimizationModelPart(
)
self.design_surface = model_part_controller.GetDesignSurface()
self.__DetermineOutputMode()
self.__CreateGiDIO()
# --------------------------------------------------------------------------
def __DetermineOutputMode(self):
output_mode = self.output_settings["design_output_mode"].GetString()
self.write_design_surface = False
self.write_optimization_model_part = False
if output_mode == "WriteDesignSurface":
self.write_design_surface = True
elif output_mode == "WriteOptimizationModelPart":
if self.optimization_model_part.NumberOfElements() == 0:
raise NameError(
"Output of optimization model part in Gid-format requires definition of elements. No elements are given in current mdpa! You may change the design output mode."
)
self.write_optimization_model_part = True
else:
raise NameError(
"The following design output mode is not defined within a GiD output (name may be misspelled): "
+ output_mode)
# --------------------------------------------------------------------------
def __CreateGiDIO(self):
self.__ModifySettingsToMatchDefaultGiDOutputProcess()
gid_config = self.output_settings["output_format"]["gid_configuration"]
results_directory = self.output_settings["output_directory"].GetString(
)
design_history_filename = self.output_settings[
"design_history_filename"].GetString()
design_history_filename_with_path = results_directory + "/" + design_history_filename
if self.write_design_surface:
self.gid_io = GiDOutputProcess(self.design_surface,
design_history_filename_with_path,
gid_config)
elif self.write_optimization_model_part:
self.gid_io = GiDOutputProcess(self.optimization_model_part,
design_history_filename_with_path,
gid_config)
# --------------------------------------------------------------------------
def __ModifySettingsToMatchDefaultGiDOutputProcess(self):
self.__AddNodalResultsToGidConfiguration()
self.__SetConditionsFlagAccordingOutputMode()
# --------------------------------------------------------------------------
def __AddNodalResultsToGidConfiguration(self):
nodal_results = self.output_settings["nodal_results"]
self.output_settings["output_format"]["gid_configuration"][
"result_file_configuration"].AddValue("nodal_results",
nodal_results)
# --------------------------------------------------------------------------
def __SetConditionsFlagAccordingOutputMode(self):
gid_config = self.output_settings["output_format"]["gid_configuration"]
if not gid_config["result_file_configuration"]["gidpost_flags"].Has(
"WriteConditionsFlag"):
gid_config["result_file_configuration"][
"gidpost_flags"].AddEmptyValue("WriteConditionsFlag")
if self.write_design_surface:
gid_config["result_file_configuration"]["gidpost_flags"][
"WriteConditionsFlag"].SetString("WriteConditions")
elif self.write_optimization_model_part:
gid_config["result_file_configuration"]["gidpost_flags"][
"WriteConditionsFlag"].SetString("WriteElementsOnly")
# --------------------------------------------------------------------------
def InitializeLogging(self):
self.gid_io.ExecuteInitialize()
self.gid_io.ExecuteBeforeSolutionLoop()
# --------------------------------------------------------------------------
def LogCurrentDesign(self, optimizationIteration):
OriginalTime = self.optimization_model_part.ProcessInfo[TIME]
self.optimization_model_part.ProcessInfo[TIME] = optimizationIteration
self.gid_io.ExecuteInitializeSolutionStep()
if (self.gid_io.IsOutputStep()):
self.gid_io.PrintOutput()
self.gid_io.ExecuteFinalizeSolutionStep()
self.optimization_model_part.ProcessInfo[TIME] = OriginalTime
# --------------------------------------------------------------------------
def FinalizeLogging(self):
self.gid_io.ExecuteFinalize()
# Solving the problem (time integration)
while (time <= end_time):
time = time + delta_time
main_model_part.ProcessInfo[STEP] += 1
main_model_part.CloneTimeStep(time)
if (parallel_type == "OpenMP") or (mpi.rank == 0):
Logger.PrintInfo("STEP: ", main_model_part.ProcessInfo[STEP])
Logger.PrintInfo("TIME: ", time)
for process in list_of_processes:
process.ExecuteInitializeSolutionStep()
if (output_post == True):
gid_output.ExecuteInitializeSolutionStep()
solver.Solve()
for process in list_of_processes:
process.ExecuteFinalizeSolutionStep()
if (output_post == True):
gid_output.ExecuteFinalizeSolutionStep()
for process in list_of_processes:
process.ExecuteBeforeOutputStep()
if (output_post == True) and (gid_output.IsOutputStep()):
gid_output.PrintOutput()
class MokBenchmarkTest(KratosUnittest.TestCase):
def setUp(self):
self.print_output = False
self.work_folder = "MokBenchmarkTest"
self.settings = "ProjectParameters.json"
self.fluid_input_file = "mok_benchmark_Fluid"
self.structure_input_file = "mok_benchmark_Fluid"
def tearDown(self):
self.deleteOutFile(self.fluid_input_file + '.time')
self.deleteOutFile(self.structure_input_file + '.time')
def deleteOutFile(self, filename):
with WorkFolderScope(self.work_folder):
try:
remove(filename)
except FileNotFoundError as e:
pass
def testMokBenchmark(self):
with WorkFolderScope(self.work_folder):
parameter_file = open(self.settings, 'r')
self.ProjectParameters = Parameters(parameter_file.read())
## Fluid-Structure model parts definition
self.structure_main_model_part = ModelPart(
self.ProjectParameters["structure_solver_settings"]
["problem_data"]["model_part_name"].GetString())
self.structure_main_model_part.ProcessInfo.SetValue(
DOMAIN_SIZE,
self.ProjectParameters["structure_solver_settings"]
["problem_data"]["domain_size"].GetInt())
self.fluid_main_model_part = ModelPart(
self.ProjectParameters["fluid_solver_settings"]["problem_data"]
["model_part_name"].GetString())
self.fluid_main_model_part.ProcessInfo.SetValue(
DOMAIN_SIZE, self.ProjectParameters["fluid_solver_settings"]
["problem_data"]["domain_size"].GetInt())
FluidModel = {
self.ProjectParameters["fluid_solver_settings"]["problem_data"]["model_part_name"].GetString(
):
self.fluid_main_model_part
}
SolidModel = {
self.ProjectParameters["structure_solver_settings"]["problem_data"]["model_part_name"].GetString(
):
self.structure_main_model_part
}
## Solver construction
solver_module = __import__(
self.ProjectParameters["coupling_solver_settings"]
["solver_settings"]["solver_type"].GetString())
self.solver = solver_module.CreateSolver(
self.structure_main_model_part, self.fluid_main_model_part,
self.ProjectParameters)
self.solver.AddVariables()
## Read the model - note that SetBufferSize is done here
self.solver.ImportModelPart()
## Add AddDofs
self.solver.AddDofs()
## Initialize GiD I/O
if (self.print_output == True):
from gid_output_process import GiDOutputProcess
self.gid_output_structure = GiDOutputProcess(
self.solver.structure_solver.GetComputingModelPart(),
self.ProjectParameters["structure_solver_settings"]
["problem_data"]["problem_name"].GetString() +
"_structure",
self.ProjectParameters["structure_solver_settings"]
["output_configuration"])
self.gid_output_fluid = GiDOutputProcess(
self.solver.fluid_solver.GetComputingModelPart(),
self.ProjectParameters["fluid_solver_settings"]
["problem_data"]["problem_name"].GetString() + "_fluid",
self.ProjectParameters["fluid_solver_settings"]
["output_configuration"])
self.gid_output_structure.ExecuteInitialize()
self.gid_output_fluid.ExecuteInitialize()
## Get the list of the skin submodel parts in the object Model (FLUID)
for i in range(self.ProjectParameters["fluid_solver_settings"]
["solver_settings"]["skin_parts"].size()):
skin_part_name = self.ProjectParameters[
"fluid_solver_settings"]["solver_settings"]["skin_parts"][
i].GetString()
FluidModel.update({
skin_part_name:
self.fluid_main_model_part.GetSubModelPart(skin_part_name)
})
## Get the list of the no-skin submodel parts in the object Model (FLUID)
for i in range(self.ProjectParameters["fluid_solver_settings"]
["solver_settings"]["no_skin_parts"].size()):
no_skin_part_name = self.ProjectParameters[
"fluid_solver_settings"]["solver_settings"][
"no_skin_parts"][i].GetString()
FluidModel.update({
no_skin_part_name:
self.fluid_main_model_part.GetSubModelPart(
no_skin_part_name)
})
## Get the list of the initial conditions submodel parts in the object Model (FLUID)
for i in range(self.ProjectParameters["fluid_solver_settings"]
["initial_conditions_process_list"].size()):
initial_cond_part_name = self.ProjectParameters[
"fluid_solver_settings"][
"initial_conditions_process_list"][i]["Parameters"][
"model_part_name"].GetString()
FluidModel.update({
initial_cond_part_name:
self.fluid_main_model_part.GetSubModelPart(
initial_cond_part_name)
})
## Get the gravity submodel part in the object Model (FLUID)
for i in range(self.ProjectParameters["fluid_solver_settings"]
["gravity"].size()):
gravity_part_name = self.ProjectParameters[
"fluid_solver_settings"]["gravity"][i]["Parameters"][
"model_part_name"].GetString()
FluidModel.update({
gravity_part_name:
self.fluid_main_model_part.GetSubModelPart(
gravity_part_name)
})
## Get the list of the submodel part in the object Model (STRUCTURE)
for i in range(
self.ProjectParameters["structure_solver_settings"]
["solver_settings"]["processes_sub_model_part_list"].size()):
part_name = self.ProjectParameters[
"structure_solver_settings"]["solver_settings"][
"processes_sub_model_part_list"][i].GetString()
SolidModel.update({
part_name:
self.structure_main_model_part.GetSubModelPart(part_name)
})
## Processes construction
import process_factory
# "list_of_processes" contains all the processes already constructed (boundary conditions, initial conditions and gravity)
# Note that the conditions are firstly constructed. Otherwise, they may overwrite the BCs information.
# FLUID DOMAIN PROCESSES
self.list_of_processes = process_factory.KratosProcessFactory(
FluidModel).ConstructListOfProcesses(
self.ProjectParameters["fluid_solver_settings"]
["initial_conditions_process_list"])
self.list_of_processes += process_factory.KratosProcessFactory(
FluidModel).ConstructListOfProcesses(
self.ProjectParameters["fluid_solver_settings"]
["boundary_conditions_process_list"])
self.list_of_processes += process_factory.KratosProcessFactory(
FluidModel).ConstructListOfProcesses(
self.ProjectParameters["fluid_solver_settings"]["gravity"])
# SOLID DOMAIN PROCESSES
self.list_of_processes += process_factory.KratosProcessFactory(
SolidModel).ConstructListOfProcesses(
self.ProjectParameters["structure_solver_settings"]
["constraints_process_list"])
self.list_of_processes += process_factory.KratosProcessFactory(
SolidModel).ConstructListOfProcesses(
self.ProjectParameters["structure_solver_settings"]
["loads_process_list"])
## Processes initialization
for process in self.list_of_processes:
process.ExecuteInitialize()
# Solver initialization moved after the processes initialization, otherwise the flag INTERFACE is not set
self.solver.Initialize()
## Time settings
end_time = self.ProjectParameters["fluid_solver_settings"][
"problem_data"]["end_time"].GetDouble()
time = 0.0
step = 0
out = 0.0
if (self.print_output == True):
self.gid_output_structure.ExecuteBeforeSolutionLoop()
self.gid_output_fluid.ExecuteBeforeSolutionLoop()
for process in self.list_of_processes:
process.ExecuteBeforeSolutionLoop()
while (time <= end_time):
Dt = (self.solver).ComputeDeltaTime()
time = time + Dt
step = step + 1
self.solver.SetTimeStep(step)
self.structure_main_model_part.CloneTimeStep(time)
self.fluid_main_model_part.CloneTimeStep(time)
for process in self.list_of_processes:
process.ExecuteInitializeSolutionStep()
if (self.print_output == True):
self.gid_output_structure.ExecuteInitializeSolutionStep()
self.gid_output_fluid.ExecuteInitializeSolutionStep()
(self.solver).Solve()
for process in self.list_of_processes:
process.ExecuteFinalizeSolutionStep()
if (self.print_output == True):
self.gid_output_structure.ExecuteFinalizeSolutionStep()
self.gid_output_fluid.ExecuteFinalizeSolutionStep()
#TODO: decide if it shall be done only when output is processed or not
for process in self.list_of_processes:
process.ExecuteBeforeOutputStep()
if (self.print_output == True):
if self.gid_output_structure.IsOutputStep():
self.gid_output_structure.PrintOutput()
if self.gid_output_fluid.IsOutputStep():
self.gid_output_fluid.PrintOutput()
for process in self.list_of_processes:
process.ExecuteAfterOutputStep()
out = out + Dt
for process in self.list_of_processes:
process.ExecuteFinalize()
if (self.print_output == True):
self.gid_output_structure.ExecuteFinalize()
self.gid_output_fluid.ExecuteFinalize()
class Kratos_Execute_Test:
def __init__(self, ProjectParameters):
self.ProjectParameters = ProjectParameters
self.main_model_part = KratosMultiphysics.ModelPart(
self.ProjectParameters["problem_data"]
["model_part_name"].GetString())
self.main_model_part.ProcessInfo.SetValue(
KratosMultiphysics.DOMAIN_SIZE,
self.ProjectParameters["problem_data"]["domain_size"].GetInt())
self.Model = {
self.ProjectParameters["problem_data"]["model_part_name"].GetString(
):
self.main_model_part
}
# Construct the solver (main setting methods are located in the solver_module)
solver_module = __import__(self.ProjectParameters["solver_settings"]
["solver_type"].GetString())
self.solver = solver_module.CreateSolver(
self.main_model_part, self.ProjectParameters["solver_settings"])
# Add variables (always before importing the model part) (it must be integrated in the ImportModelPart)
# If we integrate it in the model part we cannot use combined solvers
self.solver.AddVariables()
# Read model_part (note: the buffer_size is set here) (restart can be read here)
self.solver.ImportModelPart()
# Add dofs (always after importing the model part) (it must be integrated in the ImportModelPart)
# If we integrate it in the model part we cannot use combined solvers
self.solver.AddDofs()
# Build sub_model_parts or submeshes (rearrange parts for the application of custom processes)
# #Get the list of the submodel part in the object Model
for i in range(self.ProjectParameters["solver_settings"]
["processes_sub_model_part_list"].size()):
part_name = self.ProjectParameters["solver_settings"][
"processes_sub_model_part_list"][i].GetString()
self.Model.update(
{part_name: self.main_model_part.GetSubModelPart(part_name)})
# Obtain the list of the processes to be applied
self.list_of_processes = process_factory.KratosProcessFactory(
self.Model).ConstructListOfProcesses(
self.ProjectParameters["constraints_process_list"])
self.list_of_processes += process_factory.KratosProcessFactory(
self.Model).ConstructListOfProcesses(
self.ProjectParameters["loads_process_list"])
if (ProjectParameters.Has("list_other_processes") == True):
self.list_of_processes += process_factory.KratosProcessFactory(
self.Model).ConstructListOfProcesses(
self.ProjectParameters["list_other_processes"])
if (ProjectParameters.Has("json_check_process") == True):
self.list_of_processes += process_factory.KratosProcessFactory(
self.Model).ConstructListOfProcesses(
self.ProjectParameters["json_check_process"])
if (ProjectParameters.Has("check_analytic_results_process") == True):
self.list_of_processes += process_factory.KratosProcessFactory(
self.Model).ConstructListOfProcesses(
self.ProjectParameters["check_analytic_results_process"])
if (ProjectParameters.Has("json_output_process") == True):
self.list_of_processes += process_factory.KratosProcessFactory(
self.Model).ConstructListOfProcesses(
self.ProjectParameters["json_output_process"])
for process in self.list_of_processes:
process.ExecuteInitialize()
# ### START SOLUTION ####
self.computing_model_part = self.solver.GetComputingModelPart()
# ### Output settings start ####
self.problem_path = os.getcwd()
self.problem_name = self.ProjectParameters["problem_data"][
"problem_name"].GetString()
# ### Output settings start ####
self.output_post = ProjectParameters.Has("output_configuration")
if (self.output_post == True):
from gid_output_process import GiDOutputProcess
output_settings = ProjectParameters["output_configuration"]
self.gid_output = GiDOutputProcess(self.computing_model_part,
self.problem_name,
output_settings)
self.gid_output.ExecuteInitialize()
# Sets strategies, builders, linear solvers, schemes and solving info, and fills the buffer
self.solver.Initialize()
self.solver.SetEchoLevel(0) # Avoid to print anything
if (self.output_post == True):
self.gid_output.ExecuteBeforeSolutionLoop()
def Solve(self):
for process in self.list_of_processes:
process.ExecuteBeforeSolutionLoop()
# #Stepping and time settings (get from process info or solving info)
# Delta time
delta_time = self.ProjectParameters["problem_data"][
"time_step"].GetDouble()
# Start step
self.main_model_part.ProcessInfo[KratosMultiphysics.TIME_STEPS] = 0
# Start time
time = self.ProjectParameters["problem_data"]["start_time"].GetDouble()
# End time
end_time = self.ProjectParameters["problem_data"][
"end_time"].GetDouble()
# Solving the problem (time integration)
while (time <= end_time):
time = time + delta_time
self.main_model_part.ProcessInfo[
KratosMultiphysics.TIME_STEPS] += 1
self.main_model_part.CloneTimeStep(time)
for process in self.list_of_processes:
process.ExecuteInitializeSolutionStep()
if (self.output_post == True):
self.gid_output.ExecuteInitializeSolutionStep()
self.solver.Solve()
current_vals = [
ev for ev in self.computing_model_part.ProcessInfo[
StructuralMechanicsApplication.EIGENVALUE_VECTOR]
]
print(current_vals)
if (self.output_post == True):
self.gid_output.ExecuteFinalizeSolutionStep()
for process in self.list_of_processes:
process.ExecuteFinalizeSolutionStep()
for process in self.list_of_processes:
process.ExecuteBeforeOutputStep()
for process in self.list_of_processes:
process.ExecuteAfterOutputStep()
if (self.output_post == True):
if self.gid_output.IsOutputStep():
self.gid_output.PrintOutput()
if (self.output_post == True):
self.gid_output.ExecuteFinalize()
for process in self.list_of_processes:
process.ExecuteFinalize()
class TestPatchTestLargeStrain(KratosUnittest.TestCase):
def setUp(self):
pass
def _add_variables(self, mp):
mp.AddNodalSolutionStepVariable(KratosMultiphysics.DISPLACEMENT)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.REACTION)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.VOLUME_ACCELERATION)
def _apply_material_properties(self, mp, dim, small_strain=True):
#define properties
mp.GetProperties()[1].SetValue(KratosMultiphysics.YOUNG_MODULUS, 210e9)
mp.GetProperties()[1].SetValue(KratosMultiphysics.POISSON_RATIO, 0.3)
mp.GetProperties()[1].SetValue(KratosMultiphysics.THICKNESS, 1.0)
g = [0, 0, 0]
mp.GetProperties()[1].SetValue(KratosMultiphysics.VOLUME_ACCELERATION,
g)
if (dim == 2):
if (small_strain == True):
cl = StructuralMechanicsApplication.LinearElasticPlaneStress2DLaw(
)
else:
cl = StructuralMechanicsApplication.HyperElasticPlaneStrain2DLaw(
)
else:
if (small_strain == True):
cl = StructuralMechanicsApplication.LinearElastic3DLaw()
else:
cl = StructuralMechanicsApplication.HyperElastic3DLaw()
mp.GetProperties()[1].SetValue(KratosMultiphysics.CONSTITUTIVE_LAW, cl)
def _set_buffer(self, mp):
buffer_size = 3
mp.SetBufferSize(buffer_size)
# Cycle the buffer. This sets all historical nodal solution step data to
# the current value and initializes the time stepping in the process info.
mp.ProcessInfo[KratosMultiphysics.DELTA_TIME] = 1.0
delta_time = mp.ProcessInfo[KratosMultiphysics.DELTA_TIME]
time = mp.ProcessInfo[KratosMultiphysics.TIME]
step = -buffer_size
time = time - delta_time * buffer_size
mp.ProcessInfo.SetValue(KratosMultiphysics.TIME, time)
for i in range(0, buffer_size):
step = step + 1
time = time + delta_time
mp.ProcessInfo.SetValue(KratosMultiphysics.STEP, step)
mp.CloneTimeStep(time)
def _apply_BCs(self, mp, A, b):
for node in mp.Nodes:
node.Fix(KratosMultiphysics.DISPLACEMENT_X)
node.Fix(KratosMultiphysics.DISPLACEMENT_Y)
node.Fix(KratosMultiphysics.DISPLACEMENT_Z)
for node in mp.Nodes:
xvec = KratosMultiphysics.Vector(3)
u = KratosMultiphysics.Vector()
xvec[0] = node.X0
xvec[1] = node.Y0
xvec[2] = node.Z0
u = A * xvec
u += b
node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT, 0, u)
def _define_movement(self, dim):
if (dim == 2):
#define the applied motion - the idea is that the displacement is defined as u = A*xnode + b
#so that the displcement is linear and the exact F = I + A
A = KratosMultiphysics.Matrix(3, 3)
A[0, 0] = 0.10
A[0, 1] = 0.12
A[0, 2] = 0.0
A[1, 0] = -0.05
A[1, 1] = 0.07
A[1, 2] = 0.0
A[2, 1] = 0.00
A[2, 1] = 0.0
A[2, 2] = 0.0
b = KratosMultiphysics.Vector(3)
b[0] = 0.05
b[1] = -0.02
b[2] = 0.00
else:
#define the applied motion - the idea is that the displacement is defined as u = A*xnode + b
#so that the displcement is linear and the exact F = I + A
A = KratosMultiphysics.Matrix(3, 3)
A[0, 0] = 0.10
A[0, 1] = 0.12
A[0, 2] = 0.0
A[1, 0] = -0.05
A[1, 1] = 0.07
A[1, 2] = 0.1
A[2, 1] = -0.02
A[2, 1] = 0.0
A[2, 2] = -0.3
b = KratosMultiphysics.Vector(3)
b[0] = 0.05
b[1] = -0.02
b[2] = 0.07
return A, b
def _solve(self, mp):
#define a minimal newton raphson solver
linear_solver = KratosMultiphysics.SkylineLUFactorizationSolver()
builder_and_solver = KratosMultiphysics.ResidualBasedEliminationBuilderAndSolver(
linear_solver)
scheme = KratosMultiphysics.ResidualBasedIncrementalUpdateStaticScheme(
)
convergence_criterion = KratosMultiphysics.ResidualCriteria(
1e-14, 1e-20)
convergence_criterion.SetEchoLevel(0)
max_iters = 20
compute_reactions = True
reform_step_dofs = True
move_mesh_flag = True
strategy = KratosMultiphysics.ResidualBasedNewtonRaphsonStrategy(
mp, scheme, linear_solver, convergence_criterion,
builder_and_solver, max_iters, compute_reactions, reform_step_dofs,
move_mesh_flag)
strategy.SetEchoLevel(0)
strategy.Check()
strategy.Solve()
def _create_strategy(self, mp):
#define a minimal newton raphson solver
linear_solver = KratosMultiphysics.SkylineLUFactorizationSolver()
builder_and_solver = KratosMultiphysics.ResidualBasedEliminationBuilderAndSolver(
linear_solver)
scheme = KratosMultiphysics.ResidualBasedIncrementalUpdateStaticScheme(
)
convergence_criterion = KratosMultiphysics.ResidualCriteria(1e-4, 1e-9)
convergence_criterion.SetEchoLevel(0)
#max_iters = 1
max_iters = 20
compute_reactions = True
reform_step_dofs = True
move_mesh_flag = True
strategy = KratosMultiphysics.ResidualBasedNewtonRaphsonStrategy(
mp, scheme, linear_solver, convergence_criterion,
builder_and_solver, max_iters, compute_reactions, reform_step_dofs,
move_mesh_flag)
strategy.SetEchoLevel(0)
return strategy
def _solve_with_strategy(self, strategy, lhs, step):
strategy.Check()
strategy.Initialize()
strategy.InitializeSolutionStep()
strategy.Predict()
strategy.SolveSolutionStep()
lhs = strategy.GetSystemMatrix()
strategy.FinalizeSolutionStep()
def _check_results(self, mp, A, b):
##check that the results are exact on the nodes
for node in mp.Nodes:
xvec = KratosMultiphysics.Vector(len(b))
xvec[0] = node.X0
xvec[1] = node.Y0
xvec[2] = node.Z0
u = KratosMultiphysics.Vector(2)
u = A * xvec
u += b
d = node.GetSolutionStepValue(KratosMultiphysics.DISPLACEMENT)
self.assertAlmostEqual(d[0], u[0])
self.assertAlmostEqual(d[1], u[1])
self.assertAlmostEqual(d[2], u[2])
def _check_outputs(self, mp, A, dim):
E = mp.GetProperties()[1].GetValue(KratosMultiphysics.YOUNG_MODULUS)
NU = mp.GetProperties()[1].GetValue(KratosMultiphysics.POISSON_RATIO)
#given the matrix A, the analytic deformation gradient is F+I
F = A
for i in range(3):
F[i, i] += 1.0
#here compute the Cauchy green strain tensor
Etensor = KratosMultiphysics.Matrix(3, 3)
for i in range(3):
for j in range(3):
Etensor[i, j] = 0.0
for i in range(3):
for j in range(3):
for k in range(3):
Etensor[i, j] += A[k, i] * A[k, j]
for i in range(3):
Etensor[i, i] -= 1.0
for i in range(3):
for j in range(3):
Etensor[i, j] = 0.5 * Etensor[i, j]
if (dim == 2):
#verify strain
reference_strain = KratosMultiphysics.Vector(3)
reference_strain[0] = Etensor[0, 0]
reference_strain[1] = Etensor[1, 1]
reference_strain[2] = 2.0 * Etensor[0, 1]
else:
reference_strain = KratosMultiphysics.Vector(6)
reference_strain[0] = Etensor[0, 0]
reference_strain[1] = Etensor[1, 1]
reference_strain[2] = Etensor[2, 2]
reference_strain[3] = 2.0 * Etensor[0, 1]
reference_strain[4] = 2.0 * Etensor[1, 2]
reference_strain[5] = 2.0 * Etensor[0, 2]
for elem in mp.Elements:
out = elem.CalculateOnIntegrationPoints(
KratosMultiphysics.GREEN_LAGRANGE_STRAIN_VECTOR,
mp.ProcessInfo)
for strain in out:
for i in range(len(reference_strain)):
self.assertTrue((abs(
(reference_strain[i] - strain[i]) / strain[i]) <
1.0e-4))
#finally compute stress
if (dim == 2):
#here assume plane stress
c1 = E / (1.00 - NU * NU)
c2 = c1 * NU
c3 = 0.5 * E / (1 + NU)
reference_stress = KratosMultiphysics.Vector(3)
reference_stress[0] = c1 * reference_strain[0] + c2 * (
reference_strain[1])
reference_stress[1] = c1 * reference_strain[1] + c2 * (
reference_strain[0])
reference_stress[2] = c3 * reference_strain[2]
else:
c1 = E / ((1.00 + NU) * (1 - 2 * NU))
c2 = c1 * (1 - NU)
c3 = c1 * NU
c4 = c1 * 0.5 * (1 - 2 * NU)
reference_stress = KratosMultiphysics.Vector(6)
reference_stress[0] = c2 * reference_strain[0] + c3 * (
reference_strain[1] + reference_strain[2])
reference_stress[1] = c2 * reference_strain[1] + c3 * (
reference_strain[0] + reference_strain[2])
reference_stress[2] = c2 * reference_strain[2] + c3 * (
reference_strain[0] + reference_strain[1])
reference_stress[3] = c4 * reference_strain[3]
reference_stress[4] = c4 * reference_strain[4]
reference_stress[5] = c4 * reference_strain[5]
for elem in mp.Elements:
out = elem.CalculateOnIntegrationPoints(
KratosMultiphysics.PK2_STRESS_VECTOR, mp.ProcessInfo)
for stress in out:
for i in range(len(reference_stress)):
self.assertTrue((abs(
(reference_stress[i] - stress[i]) / stress[i]) <
1.0e-4))
def test_compare_TL_UL_2D_triangle(self):
dim = 2
bc_nodes = [1, 2]
load_nodes = [3, 4]
tl_mp = KratosMultiphysics.ModelPart("tl_solid_part")
self._add_variables(tl_mp)
self._apply_material_properties(tl_mp, dim, False)
# Create nodes
tl_mp.CreateNewNode(1, 0.0, 0.0, 0.0)
tl_mp.CreateNewNode(2, 1.0, 0.0, 0.0)
tl_mp.CreateNewNode(3, 1.0, 1.0, 0.0)
tl_mp.CreateNewNode(4, 0.0, 1.0, 0.0)
for node in tl_mp.Nodes:
node.AddDof(KratosMultiphysics.DISPLACEMENT_X,
KratosMultiphysics.REACTION_X)
node.AddDof(KratosMultiphysics.DISPLACEMENT_Y,
KratosMultiphysics.REACTION_Y)
node.AddDof(KratosMultiphysics.DISPLACEMENT_Z,
KratosMultiphysics.REACTION_Z)
# Create a submodelpart for boundary conditions
tl_bcs = tl_mp.CreateSubModelPart("BoundaryCondtions")
tl_bcs.AddNodes(bc_nodes)
for node in tl_bcs.Nodes:
node.Fix(KratosMultiphysics.DISPLACEMENT_X)
node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT_X, 0.0)
node.Fix(KratosMultiphysics.DISPLACEMENT_Y)
node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT_Y, 0.0)
# Create Element and condition
tl_elem = tl_mp.CreateNewElement("TotalLagrangianElement2D4N", 1,
[1, 2, 3, 4],
tl_mp.GetProperties()[1])
tl_load = tl_mp.CreateSubModelPart("LoadCondtions")
tl_load.AddNodes(load_nodes)
tl_cond = tl_mp.CreateNewCondition("LineLoadCondition2D2N", 1,
load_nodes,
tl_mp.GetProperties()[1])
self._set_buffer(tl_mp)
tl_lhs = KratosMultiphysics.CompressedMatrix()
ul_mp = KratosMultiphysics.ModelPart("ul_solid_part")
self._add_variables(ul_mp)
self._apply_material_properties(ul_mp, dim, False)
# Create nodes
ul_mp.CreateNewNode(1, 0.0, 0.0, 0.0)
ul_mp.CreateNewNode(2, 1.0, 0.0, 0.0)
ul_mp.CreateNewNode(3, 1.0, 1.0, 0.0)
ul_mp.CreateNewNode(4, 0.0, 1.0, 0.0)
for node in ul_mp.Nodes:
node.AddDof(KratosMultiphysics.DISPLACEMENT_X,
KratosMultiphysics.REACTION_X)
node.AddDof(KratosMultiphysics.DISPLACEMENT_Y,
KratosMultiphysics.REACTION_Y)
node.AddDof(KratosMultiphysics.DISPLACEMENT_Z,
KratosMultiphysics.REACTION_Z)
# Create a submodelpart for boundary conditions
ul_bcs = ul_mp.CreateSubModelPart("BoundaryCondtions")
ul_bcs.AddNodes(bc_nodes)
for node in ul_bcs.Nodes:
node.Fix(KratosMultiphysics.DISPLACEMENT_X)
node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT_X, 0.0)
node.Fix(KratosMultiphysics.DISPLACEMENT_Y)
node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT_Y, 0.0)
# Create Element
ul_elem = ul_mp.CreateNewElement("UpdatedLagrangianElement2D4N", 1,
[1, 2, 3, 4],
ul_mp.GetProperties()[1])
ul_load = ul_mp.CreateSubModelPart("LoadCondtions")
ul_load.AddNodes(load_nodes)
ul_cond = ul_mp.CreateNewCondition("LineLoadCondition2D2N", 1,
load_nodes,
tl_mp.GetProperties()[1])
self._set_buffer(ul_mp)
ul_lhs = KratosMultiphysics.CompressedMatrix()
# Now we solve
load = KratosMultiphysics.Vector(3)
load[0] = 0.0
load[1] = 0.0
load[2] = 0.0
delta_time = ul_mp.ProcessInfo[KratosMultiphysics.DELTA_TIME]
time = ul_mp.ProcessInfo[KratosMultiphysics.TIME]
tl_strategy = self._create_strategy(tl_mp)
ul_strategy = self._create_strategy(ul_mp)
for iter in range(1, 4):
time += iter * delta_time
tl_mp.CloneTimeStep(time)
ul_mp.CloneTimeStep(time)
#load[1] = iter * 1.0e10
#tl_cond.SetValue(StructuralMechanicsApplication.LINE_LOAD, load)
#ul_cond.SetValue(StructuralMechanicsApplication.LINE_LOAD, load)
for node in tl_load.Nodes:
node.Fix(KratosMultiphysics.DISPLACEMENT_X)
node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT_X,
iter * 5.0e-1)
for node in ul_load.Nodes:
node.Fix(KratosMultiphysics.DISPLACEMENT_X)
node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT_X,
iter * 5.0e-1)
#for node in tl_load.Nodes:
#node.Fix(KratosMultiphysics.DISPLACEMENT_Y)
#node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT_Y, iter * 5.0e-1)
#for node in ul_load.Nodes:
#node.Fix(KratosMultiphysics.DISPLACEMENT_Y)
#node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT_Y, iter * 5.0e-1)
self._solve_with_strategy(tl_strategy, tl_lhs, iter)
self._solve_with_strategy(ul_strategy, ul_lhs, iter)
# Check displacement
for i in range(2, 4):
tl_dx = tl_mp.Nodes[i].GetSolutionStepValue(
KratosMultiphysics.DISPLACEMENT_X)
tl_dy = tl_mp.Nodes[i].GetSolutionStepValue(
KratosMultiphysics.DISPLACEMENT_Y)
ul_dx = ul_mp.Nodes[i].GetSolutionStepValue(
KratosMultiphysics.DISPLACEMENT_X)
ul_dy = ul_mp.Nodes[i].GetSolutionStepValue(
KratosMultiphysics.DISPLACEMENT_Y)
if (ul_dx > 0.0):
self.assertLess((tl_dx - ul_dx) / ul_dx, 1.0e-3)
if (ul_dy > 0.0):
self.assertLess((tl_dy - ul_dy) / ul_dy, 1.0e-3)
# Compare matrices
for i in range(ul_lhs.Size1()):
for j in range(ul_lhs.Size2()):
self.assertLess(
(ul_lhs[i, j] - tl_lhs[i, j]) / tl_lhs[i, j], 1.0e-3)
#self.__post_process(tl_mp)
#self.__post_process(ul_mp)
def test_TL_2D_triangle(self):
dim = 2
mp = KratosMultiphysics.ModelPart("solid_part")
self._add_variables(mp)
self._apply_material_properties(mp, dim)
#create nodes
mp.CreateNewNode(1, 0.5, 0.5, 0.0)
mp.CreateNewNode(2, 0.7, 0.2, 0.0)
mp.CreateNewNode(3, 0.9, 0.8, 0.0)
mp.CreateNewNode(4, 0.3, 0.7, 0.0)
mp.CreateNewNode(5, 0.6, 0.6, 0.0)
for node in mp.Nodes:
node.AddDof(KratosMultiphysics.DISPLACEMENT_X,
KratosMultiphysics.REACTION_X)
node.AddDof(KratosMultiphysics.DISPLACEMENT_Y,
KratosMultiphysics.REACTION_Y)
node.AddDof(KratosMultiphysics.DISPLACEMENT_Z,
KratosMultiphysics.REACTION_Z)
#create a submodelpart for boundary conditions
bcs = mp.CreateSubModelPart("BoundaryCondtions")
bcs.AddNodes([1, 2, 3, 4])
#create Element
mp.CreateNewElement("TotalLagrangianElement2D3N", 1, [1, 2, 5],
mp.GetProperties()[1])
mp.CreateNewElement("TotalLagrangianElement2D3N", 2, [2, 3, 5],
mp.GetProperties()[1])
mp.CreateNewElement("TotalLagrangianElement2D3N", 3, [3, 4, 5],
mp.GetProperties()[1])
mp.CreateNewElement("TotalLagrangianElement2D3N", 4, [4, 1, 5],
mp.GetProperties()[1])
A, b = self._define_movement(dim)
self._apply_BCs(bcs, A, b)
self._solve(mp)
self._check_results(mp, A, b)
self._check_outputs(mp, A, dim)
#self.__post_process(mp)
def test_TL_2D_quadrilateral(self):
dim = 2
mp = KratosMultiphysics.ModelPart("solid_part")
self._add_variables(mp)
self._apply_material_properties(mp, dim)
#create nodes
mp.CreateNewNode(1, 0.00, 3.00, 0.00)
mp.CreateNewNode(2, 1.00, 2.25, 0.00)
mp.CreateNewNode(3, 0.75, 1.00, 0.00)
mp.CreateNewNode(4, 2.25, 2.00, 0.00)
mp.CreateNewNode(5, 0.00, 0.00, 0.00)
mp.CreateNewNode(6, 3.00, 3.00, 0.00)
mp.CreateNewNode(7, 2.00, 0.75, 0.00)
mp.CreateNewNode(8, 3.00, 0.00, 0.00)
for node in mp.Nodes:
node.AddDof(KratosMultiphysics.DISPLACEMENT_X,
KratosMultiphysics.REACTION_X)
node.AddDof(KratosMultiphysics.DISPLACEMENT_Y,
KratosMultiphysics.REACTION_Y)
node.AddDof(KratosMultiphysics.DISPLACEMENT_Z,
KratosMultiphysics.REACTION_Z)
#create a submodelpart for boundary conditions
bcs = mp.CreateSubModelPart("BoundaryCondtions")
bcs.AddNodes([1, 5, 6, 8])
#create Element
mp.CreateNewElement("TotalLagrangianElement2D4N", 1, [8, 7, 3, 5],
mp.GetProperties()[1])
mp.CreateNewElement("TotalLagrangianElement2D4N", 2, [6, 4, 7, 8],
mp.GetProperties()[1])
mp.CreateNewElement("TotalLagrangianElement2D4N", 3, [1, 2, 4, 6],
mp.GetProperties()[1])
mp.CreateNewElement("TotalLagrangianElement2D4N", 4, [4, 2, 3, 7],
mp.GetProperties()[1])
mp.CreateNewElement("TotalLagrangianElement2D4N", 5, [2, 1, 5, 3],
mp.GetProperties()[1])
A, b = self._define_movement(dim)
self._apply_BCs(bcs, A, b)
self._solve(mp)
self._check_results(mp, A, b)
self._check_outputs(mp, A, dim)
#self.__post_process(mp)
def test_TL_3D_hexa(self):
dim = 3
mp = KratosMultiphysics.ModelPart("solid_part")
self._add_variables(mp)
self._apply_material_properties(mp, dim)
#create nodes
mp.CreateNewNode(1, 0.00000, 1.00000, 1.00000)
mp.CreateNewNode(2, 0.16500, 0.74500, 0.70200)
mp.CreateNewNode(3, 0.27300, 0.75000, 0.23000)
mp.CreateNewNode(4, 0.78800, 0.69300, 0.64400)
mp.CreateNewNode(5, 0.32000, 0.18600, 0.64300)
mp.CreateNewNode(6, 0.00000, 1.00000, 0.00000)
mp.CreateNewNode(7, 0.00000, 0.00000, 1.00000)
mp.CreateNewNode(8, 1.00000, 1.00000, 1.00000)
mp.CreateNewNode(9, 0.67700, 0.30500, 0.68300)
mp.CreateNewNode(10, 0.24900, 0.34200, 0.19200)
mp.CreateNewNode(11, 0.85000, 0.64900, 0.26300)
mp.CreateNewNode(12, 0.82600, 0.28800, 0.28800)
mp.CreateNewNode(13, 0.00000, 0.00000, 0.00000)
mp.CreateNewNode(14, 1.00000, 1.00000, 0.00000)
mp.CreateNewNode(15, 1.00000, 0.00000, 1.00000)
mp.CreateNewNode(16, 1.00000, 0.00000, 0.00000)
for node in mp.Nodes:
node.AddDof(KratosMultiphysics.DISPLACEMENT_X,
KratosMultiphysics.REACTION_X)
node.AddDof(KratosMultiphysics.DISPLACEMENT_Y,
KratosMultiphysics.REACTION_Y)
node.AddDof(KratosMultiphysics.DISPLACEMENT_Z,
KratosMultiphysics.REACTION_Z)
#create a submodelpart for boundary conditions
bcs = mp.CreateSubModelPart("BoundaryCondtions")
bcs.AddNodes([1, 6, 7, 8, 13, 14, 15, 16])
#create Element
mp.CreateNewElement("TotalLagrangianElement3D8N", 1,
[10, 5, 2, 3, 13, 7, 1, 6],
mp.GetProperties()[1])
mp.CreateNewElement("TotalLagrangianElement3D8N", 2,
[12, 9, 5, 10, 16, 15, 7, 13],
mp.GetProperties()[1])
mp.CreateNewElement("TotalLagrangianElement3D8N", 3,
[12, 11, 3, 10, 9, 4, 2, 5],
mp.GetProperties()[1])
mp.CreateNewElement("TotalLagrangianElement3D8N", 4,
[9, 4, 2, 5, 15, 8, 1, 7],
mp.GetProperties()[1])
mp.CreateNewElement("TotalLagrangianElement3D8N", 5,
[4, 11, 3, 2, 8, 14, 6, 1],
mp.GetProperties()[1])
mp.CreateNewElement("TotalLagrangianElement3D8N", 6,
[11, 4, 9, 12, 14, 8, 15, 16],
mp.GetProperties()[1])
mp.CreateNewElement("TotalLagrangianElement3D8N", 7,
[11, 12, 10, 3, 14, 16, 13, 6],
mp.GetProperties()[1])
A, b = self._define_movement(dim)
self._apply_BCs(bcs, A, b)
self._solve(mp)
self._check_results(mp, A, b)
self._check_outputs(mp, A, dim)
#self.__post_process(mp)
def test_UL_2D_triangle(self):
dim = 2
mp = KratosMultiphysics.ModelPart("solid_part")
self._add_variables(mp)
self._apply_material_properties(mp, dim)
#create nodes
mp.CreateNewNode(1, 0.5, 0.5, 0.0)
mp.CreateNewNode(2, 0.7, 0.2, 0.0)
mp.CreateNewNode(3, 0.9, 0.8, 0.0)
mp.CreateNewNode(4, 0.3, 0.7, 0.0)
mp.CreateNewNode(5, 0.6, 0.6, 0.0)
for node in mp.Nodes:
node.AddDof(KratosMultiphysics.DISPLACEMENT_X,
KratosMultiphysics.REACTION_X)
node.AddDof(KratosMultiphysics.DISPLACEMENT_Y,
KratosMultiphysics.REACTION_Y)
node.AddDof(KratosMultiphysics.DISPLACEMENT_Z,
KratosMultiphysics.REACTION_Z)
#create a submodelpart for boundary conditions
bcs = mp.CreateSubModelPart("BoundaryCondtions")
bcs.AddNodes([1, 2, 3, 4])
#create Element
mp.CreateNewElement("UpdatedLagrangianElement2D3N", 1, [1, 2, 5],
mp.GetProperties()[1])
mp.CreateNewElement("UpdatedLagrangianElement2D3N", 2, [2, 3, 5],
mp.GetProperties()[1])
mp.CreateNewElement("UpdatedLagrangianElement2D3N", 3, [3, 4, 5],
mp.GetProperties()[1])
mp.CreateNewElement("UpdatedLagrangianElement2D3N", 4, [4, 1, 5],
mp.GetProperties()[1])
A, b = self._define_movement(dim)
self._set_buffer(mp)
self._apply_BCs(bcs, A, b)
self._solve(mp)
self._check_results(mp, A, b)
self._check_outputs(mp, A, dim)
#self.__post_process(mp)
def test_UL_2D_quadrilateral(self):
dim = 2
mp = KratosMultiphysics.ModelPart("solid_part")
self._add_variables(mp)
self._apply_material_properties(mp, dim)
#create nodes
mp.CreateNewNode(1, 0.00, 3.00, 0.00)
mp.CreateNewNode(2, 1.00, 2.25, 0.00)
mp.CreateNewNode(3, 0.75, 1.00, 0.00)
mp.CreateNewNode(4, 2.25, 2.00, 0.00)
mp.CreateNewNode(5, 0.00, 0.00, 0.00)
mp.CreateNewNode(6, 3.00, 3.00, 0.00)
mp.CreateNewNode(7, 2.00, 0.75, 0.00)
mp.CreateNewNode(8, 3.00, 0.00, 0.00)
for node in mp.Nodes:
node.AddDof(KratosMultiphysics.DISPLACEMENT_X,
KratosMultiphysics.REACTION_X)
node.AddDof(KratosMultiphysics.DISPLACEMENT_Y,
KratosMultiphysics.REACTION_Y)
node.AddDof(KratosMultiphysics.DISPLACEMENT_Z,
KratosMultiphysics.REACTION_Z)
#create a submodelpart for boundary conditions
bcs = mp.CreateSubModelPart("BoundaryCondtions")
bcs.AddNodes([1, 5, 6, 8])
#create Element
mp.CreateNewElement("UpdatedLagrangianElement2D4N", 1, [8, 7, 3, 5],
mp.GetProperties()[1])
mp.CreateNewElement("UpdatedLagrangianElement2D4N", 2, [6, 4, 7, 8],
mp.GetProperties()[1])
mp.CreateNewElement("UpdatedLagrangianElement2D4N", 3, [1, 2, 4, 6],
mp.GetProperties()[1])
mp.CreateNewElement("UpdatedLagrangianElement2D4N", 4, [4, 2, 3, 7],
mp.GetProperties()[1])
mp.CreateNewElement("UpdatedLagrangianElement2D4N", 5, [2, 1, 5, 3],
mp.GetProperties()[1])
A, b = self._define_movement(dim)
self._set_buffer(mp)
self._apply_BCs(bcs, A, b)
self._solve(mp)
self._check_results(mp, A, b)
self._check_outputs(mp, A, dim)
#self.__post_process(mp)
def test_UL_3D_hexa(self):
dim = 3
mp = KratosMultiphysics.ModelPart("solid_part")
self._add_variables(mp)
self._apply_material_properties(mp, dim)
#create nodes
mp.CreateNewNode(1, 0.00000, 1.00000, 1.00000)
mp.CreateNewNode(2, 0.16500, 0.74500, 0.70200)
mp.CreateNewNode(3, 0.27300, 0.75000, 0.23000)
mp.CreateNewNode(4, 0.78800, 0.69300, 0.64400)
mp.CreateNewNode(5, 0.32000, 0.18600, 0.64300)
mp.CreateNewNode(6, 0.00000, 1.00000, 0.00000)
mp.CreateNewNode(7, 0.00000, 0.00000, 1.00000)
mp.CreateNewNode(8, 1.00000, 1.00000, 1.00000)
mp.CreateNewNode(9, 0.67700, 0.30500, 0.68300)
mp.CreateNewNode(10, 0.24900, 0.34200, 0.19200)
mp.CreateNewNode(11, 0.85000, 0.64900, 0.26300)
mp.CreateNewNode(12, 0.82600, 0.28800, 0.28800)
mp.CreateNewNode(13, 0.00000, 0.00000, 0.00000)
mp.CreateNewNode(14, 1.00000, 1.00000, 0.00000)
mp.CreateNewNode(15, 1.00000, 0.00000, 1.00000)
mp.CreateNewNode(16, 1.00000, 0.00000, 0.00000)
for node in mp.Nodes:
node.AddDof(KratosMultiphysics.DISPLACEMENT_X,
KratosMultiphysics.REACTION_X)
node.AddDof(KratosMultiphysics.DISPLACEMENT_Y,
KratosMultiphysics.REACTION_Y)
node.AddDof(KratosMultiphysics.DISPLACEMENT_Z,
KratosMultiphysics.REACTION_Z)
#create a submodelpart for boundary conditions
bcs = mp.CreateSubModelPart("BoundaryCondtions")
bcs.AddNodes([1, 6, 7, 8, 13, 14, 15, 16])
#create Element
mp.CreateNewElement("UpdatedLagrangianElement3D8N", 1,
[10, 5, 2, 3, 13, 7, 1, 6],
mp.GetProperties()[1])
mp.CreateNewElement("UpdatedLagrangianElement3D8N", 2,
[12, 9, 5, 10, 16, 15, 7, 13],
mp.GetProperties()[1])
mp.CreateNewElement("UpdatedLagrangianElement3D8N", 3,
[12, 11, 3, 10, 9, 4, 2, 5],
mp.GetProperties()[1])
mp.CreateNewElement("UpdatedLagrangianElement3D8N", 4,
[9, 4, 2, 5, 15, 8, 1, 7],
mp.GetProperties()[1])
mp.CreateNewElement("UpdatedLagrangianElement3D8N", 5,
[4, 11, 3, 2, 8, 14, 6, 1],
mp.GetProperties()[1])
mp.CreateNewElement("UpdatedLagrangianElement3D8N", 6,
[11, 4, 9, 12, 14, 8, 15, 16],
mp.GetProperties()[1])
mp.CreateNewElement("UpdatedLagrangianElement3D8N", 7,
[11, 12, 10, 3, 14, 16, 13, 6],
mp.GetProperties()[1])
A, b = self._define_movement(dim)
self._set_buffer(mp)
self._apply_BCs(bcs, A, b)
self._solve(mp)
self._check_results(mp, A, b)
self._check_outputs(mp, A, dim)
#self.__post_process(mp)
def __post_process(self, main_model_part):
from gid_output_process import GiDOutputProcess
self.gid_output = GiDOutputProcess(
main_model_part, "gid_output",
KratosMultiphysics.Parameters("""
{
"result_file_configuration" : {
"gidpost_flags": {
"GiDPostMode": "GiD_PostBinary",
"WriteDeformedMeshFlag": "WriteUndeformed",
"WriteConditionsFlag": "WriteConditions",
"MultiFileFlag": "SingleFile"
},
"nodal_results" : ["DISPLACEMENT"],
"gauss_point_results" : ["GREEN_LAGRANGE_STRAIN_TENSOR","CAUCHY_STRESS_TENSOR"]
}
}
"""))
self.gid_output.ExecuteInitialize()
self.gid_output.ExecuteBeforeSolutionLoop()
self.gid_output.ExecuteInitializeSolutionStep()
self.gid_output.PrintOutput()
self.gid_output.ExecuteFinalizeSolutionStep()
self.gid_output.ExecuteFinalize()
class TestMortarMapping(KratosUnittest.TestCase):
def setUp(self):
pass
def __base_test_mapping(self, input_filename, num_nodes, pure_implicit):
KratosMultiphysics.Logger.GetDefaultOutput().SetSeverity(
KratosMultiphysics.Logger.Severity.WARNING)
self.main_model_part = KratosMultiphysics.ModelPart("Structure")
self.main_model_part.SetBufferSize(2)
## Creation of the Kratos model (build sub_model_parts or submeshes)
self.StructureModel = {"Structure": self.main_model_part}
self.main_model_part.AddNodalSolutionStepVariable(
KratosMultiphysics.DISPLACEMENT)
self.main_model_part.AddNodalSolutionStepVariable(
KratosMultiphysics.VELOCITY)
self.main_model_part.AddNodalSolutionStepVariable(
KratosMultiphysics.ACCELERATION)
self.main_model_part.AddNodalSolutionStepVariable(
KratosMultiphysics.TEMPERATURE)
self.main_model_part.AddNodalSolutionStepVariable(
KratosMultiphysics.NORMAL)
self.main_model_part.AddNodalSolutionStepVariable(
KratosMultiphysics.NORMAL_CONTACT_STRESS)
self.main_model_part.AddNodalSolutionStepVariable(
ContactStructuralMechanicsApplication.WEIGHTED_GAP)
self.main_model_part.AddNodalSolutionStepVariable(
KratosMultiphysics.NODAL_H)
self.main_model_part.CloneTimeStep(1.01)
KratosMultiphysics.ModelPartIO(input_filename).ReadModelPart(
self.main_model_part)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_X, self.main_model_part)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_Y, self.main_model_part)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_Z, self.main_model_part)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.TEMPERATURE, self.main_model_part)
if (self.main_model_part.HasSubModelPart("Contact")):
interface_model_part = self.main_model_part.GetSubModelPart(
"Contact")
else:
interface_model_part = self.main_model_part.CreateSubModelPart(
"Contact")
self.mapping_model_part = self.main_model_part.GetSubModelPart(
"DISPLACEMENT_Displacement_Auto2")
self.model_part_slave = self.main_model_part.GetSubModelPart(
"Parts_Parts_Auto1")
KratosMultiphysics.VariableUtils().SetFlag(KratosMultiphysics.SLAVE,
True,
self.model_part_slave.Nodes)
KratosMultiphysics.VariableUtils().SetFlag(KratosMultiphysics.MASTER,
False,
self.model_part_slave.Nodes)
self.model_part_master = self.main_model_part.GetSubModelPart(
"Parts_Parts_Auto2")
KratosMultiphysics.VariableUtils().SetFlag(
KratosMultiphysics.SLAVE, False, self.model_part_master.Nodes)
KratosMultiphysics.VariableUtils().SetFlag(
KratosMultiphysics.MASTER, True, self.model_part_master.Nodes)
for prop in self.main_model_part.GetProperties():
prop[ContactStructuralMechanicsApplication.
INTEGRATION_ORDER_CONTACT] = 3
self.main_model_part.ProcessInfo[
ContactStructuralMechanicsApplication.ACTIVE_CHECK_FACTOR] = 3.0e-1
for node in self.mapping_model_part.Nodes:
node.Set(KratosMultiphysics.INTERFACE, True)
Preprocess = ContactStructuralMechanicsApplication.InterfacePreprocessCondition(
self.main_model_part)
interface_parameters = KratosMultiphysics.Parameters(
"""{"simplify_geometry": false}""")
Preprocess.GenerateInterfacePart3D(self.main_model_part,
self.mapping_model_part,
interface_parameters)
# We compute NODAL_H that can be used in the search and some values computation
find_nodal_h = KratosMultiphysics.FindNodalHProcess(
self.mapping_model_part)
find_nodal_h.Execute()
# We copy the conditions to the ContactSubModelPart
for cond in self.mapping_model_part.Conditions:
interface_model_part.AddCondition(cond)
del (cond)
for node in self.mapping_model_part.Nodes:
interface_model_part.AddNode(node, 0)
del (node)
# We initialize the conditions
alm_init_var = ContactStructuralMechanicsApplication.ALMFastInit(
self.mapping_model_part)
alm_init_var.Execute()
search_parameters = KratosMultiphysics.Parameters("""
{
"search_factor" : 3.5,
"allocation_size" : 1000,
"check_gap" : "NoCheck",
"type_search" : "InRadius"
}
""")
if (num_nodes == 3):
contact_search = ContactStructuralMechanicsApplication.TreeContactSearch3D3N(
self.main_model_part, search_parameters)
else:
contact_search = ContactStructuralMechanicsApplication.TreeContactSearch3D4N(
self.main_model_part, search_parameters)
# We initialize the search utility
contact_search.CreatePointListMortar()
contact_search.InitializeMortarConditions()
contact_search.UpdateMortarConditions()
for node in self.model_part_master.Nodes:
x = node.X
y = node.Y
z = node.Z
node.SetSolutionStepValue(KratosMultiphysics.TEMPERATURE, z)
node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT_X, x)
node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT_Y, y)
node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT_Z, z)
del (node)
map_parameters = KratosMultiphysics.Parameters("""
{
"echo_level" : 0,
"absolute_convergence_tolerance" : 1.0e-9,
"relative_convergence_tolerance" : 1.0e-4,
"max_number_iterations" : 10,
"integration_order" : 2
}
""")
# Copy respective conditions
for cond in self.main_model_part.Conditions:
if (cond.Is(KratosMultiphysics.SLAVE)):
self.model_part_slave.AddCondition(cond)
if (cond.Is(KratosMultiphysics.MASTER)):
self.model_part_master.AddCondition(cond)
if (pure_implicit == True):
#linear_solver = ExternalSolversApplication.SuperLUSolver()
linear_solver = KratosMultiphysics.SkylineLUFactorizationSolver()
if (num_nodes == 3):
self.mortar_mapping_double = KratosMultiphysics.SimpleMortarMapperProcess3D3NDoubleHistorical(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.TEMPERATURE, map_parameters,
linear_solver)
self.mortar_mapping_vector = KratosMultiphysics.SimpleMortarMapperProcess3D3NVectorHistorical(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.DISPLACEMENT, map_parameters,
linear_solver)
else:
self.mortar_mapping_double = KratosMultiphysics.SimpleMortarMapperProcess3D4NDoubleHistorical(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.TEMPERATURE, map_parameters,
linear_solver)
self.mortar_mapping_vector = KratosMultiphysics.SimpleMortarMapperProcess3D4NVectorHistorical(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.DISPLACEMENT, map_parameters,
linear_solver)
else:
if (num_nodes == 3):
self.mortar_mapping_double = KratosMultiphysics.SimpleMortarMapperProcess3D3NDoubleHistorical(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.TEMPERATURE, map_parameters)
self.mortar_mapping_vector = KratosMultiphysics.SimpleMortarMapperProcess3D3NVectorHistorical(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.DISPLACEMENT, map_parameters)
else:
self.mortar_mapping_double = KratosMultiphysics.SimpleMortarMapperProcess3D4NDoubleHistorical(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.TEMPERATURE, map_parameters)
self.mortar_mapping_vector = KratosMultiphysics.SimpleMortarMapperProcess3D4NVectorHistorical(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.DISPLACEMENT, map_parameters)
def _mapper_tests(self, input_filename, num_nodes, pure_implicit=False):
self.__base_test_mapping(input_filename, num_nodes, pure_implicit)
self.mortar_mapping_double.Execute()
self.mortar_mapping_vector.Execute()
### DEBUG
#self.__post_process()
import from_json_check_result_process
check_parameters = KratosMultiphysics.Parameters("""
{
"check_variables" : ["TEMPERATURE","DISPLACEMENT"],
"input_file_name" : "",
"model_part_name" : "Structure",
"sub_model_part_name" : "Parts_Parts_Auto1"
}
""")
check_parameters["input_file_name"].SetString(input_filename + ".json")
check = from_json_check_result_process.FromJsonCheckResultProcess(
self.StructureModel, check_parameters)
check.ExecuteInitialize()
check.ExecuteBeforeSolutionLoop()
check.ExecuteFinalizeSolutionStep()
#import json_output_process
#out_parameters = KratosMultiphysics.Parameters("""
#{
#"output_variables" : ["TEMPERATURE","DISPLACEMENT"],
#"output_file_name" : "",
#"model_part_name" : "Structure",
#"sub_model_part_name" : "Parts_Parts_Auto1"
#}
#""")
#out_parameters["output_file_name"].SetString(input_filename+".json")
#out = json_output_process.JsonOutputProcess(self.StructureModel, out_parameters)
#out.ExecuteInitialize()
#out.ExecuteBeforeSolutionLoop()
#out.ExecuteFinalizeSolutionStep()
def test_less_basic_mortar_mapping_triangle(self):
input_filename = os.path.dirname(
os.path.realpath(__file__)
) + "/integration_tests/test_integration_several_triangles"
self._mapper_tests(input_filename, 3, False)
def test_simple_curvature_mortar_mapping_triangle(self):
input_filename = os.path.dirname(os.path.realpath(
__file__)) + "/integration_tests/test_simple_curvature"
self._mapper_tests(input_filename, 3, False)
def test_mortar_mapping_triangle(self):
input_filename = os.path.dirname(
os.path.realpath(__file__)
) + "/integration_tests/test_double_curvature_integration_triangle"
self._mapper_tests(input_filename, 3, False)
def test_mortar_mapping_quad(self):
input_filename = os.path.dirname(
os.path.realpath(__file__)
) + "/integration_tests/test_double_curvature_integration_quadrilateral"
self._mapper_tests(input_filename, 4, False)
def __post_process(self):
from gid_output_process import GiDOutputProcess
self.gid_output = GiDOutputProcess(
self.main_model_part, "gid_output",
KratosMultiphysics.Parameters("""
{
"result_file_configuration" : {
"gidpost_flags": {
"GiDPostMode": "GiD_PostBinary",
"WriteDeformedMeshFlag": "WriteUndeformed",
"WriteConditionsFlag": "WriteElementsOnly",
"MultiFileFlag": "SingleFile"
},
"nodal_results" : ["DISPLACEMENT","NORMAL","TEMPERATURE"],
"nodal_nonhistorical_results": ["NODAL_AREA","NODAL_MAUX","NODAL_VAUX"],
"nodal_flags_results": ["MASTER","SLAVE"]
}
}
"""))
self.gid_output.ExecuteInitialize()
self.gid_output.ExecuteBeforeSolutionLoop()
self.gid_output.ExecuteInitializeSolutionStep()
self.gid_output.PrintOutput()
self.gid_output.ExecuteFinalizeSolutionStep()
self.gid_output.ExecuteFinalize()
def __sci_str(self, x):
from decimal import Decimal
s = 10 * Decimal(str(x))
s = ('{:.' + str(len(s.normalize().as_tuple().digits) - 1) +
'E}').format(s)
s = s.replace('E+', 'D0')
s = s.replace('E-', 'D0-')
s = s.replace('.', '')
if s.startswith('-'):
return '-.' + s[1:]
else:
return '.' + s
class TestPatchTestFormfinding(KratosUnittest.TestCase):
def setUp(self):
pass
def _add_variables(self, mp):
mp.AddNodalSolutionStepVariable(KratosMultiphysics.DISPLACEMENT)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.REACTION)
def _add_dofs(self, mp):
# Adding the dofs AND their corresponding reaction!
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_X, KratosMultiphysics.REACTION_X,
mp)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_Y, KratosMultiphysics.REACTION_Y,
mp)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_Z, KratosMultiphysics.REACTION_Z,
mp)
def _create_nodes(self, mp, element_name):
mp.CreateNewNode(1, 0.0, 0.0, 0.0)
mp.CreateNewNode(2, 0.0, 10.0, 5.0)
mp.CreateNewNode(3, 10.0, 0.0, 5.0)
mp.CreateNewNode(4, 10.0, 10.0, 0.0)
mp.CreateNewNode(5, 5.0, 5.0, 5.0)
def _create_elements(self, mp, element_name):
mp.CreateNewElement(element_name, 1, [1, 2, 5], mp.GetProperties()[1])
mp.CreateNewElement(element_name, 2, [1, 5, 3], mp.GetProperties()[1])
mp.CreateNewElement(element_name, 3, [3, 4, 5], mp.GetProperties()[1])
mp.CreateNewElement(element_name, 4, [2, 4, 5], mp.GetProperties()[1])
def _apply_dirichlet_BCs(self, mp):
KratosMultiphysics.VariableUtils().ApplyFixity(
KratosMultiphysics.DISPLACEMENT_X, True, mp.Nodes)
KratosMultiphysics.VariableUtils().ApplyFixity(
KratosMultiphysics.DISPLACEMENT_Y, True, mp.Nodes)
KratosMultiphysics.VariableUtils().ApplyFixity(
KratosMultiphysics.DISPLACEMENT_Z, True, mp.Nodes)
def _apply_material_properties(self, mp):
#define properties
mp.GetProperties()[1].SetValue(KratosMultiphysics.YOUNG_MODULUS, 0.0)
mp.GetProperties()[1].SetValue(KratosMultiphysics.POISSON_RATIO, 0.0)
mp.GetProperties()[1].SetValue(KratosMultiphysics.THICKNESS, 1.0)
mp.GetProperties()[1].SetValue(KratosMultiphysics.DENSITY, 1.0)
prestress = KratosMultiphysics.Matrix(1, 3)
prestress[0, 0] = 2.0
prestress[0, 1] = 1.0
prestress[0, 2] = 0.0
mp.GetProperties()[1].SetValue(
StructuralMechanicsApplication.MEMBRANE_PRESTRESS, prestress)
cl = StructuralMechanicsApplication.LinearElasticPlaneStress2DLaw()
mp.GetProperties()[1].SetValue(KratosMultiphysics.CONSTITUTIVE_LAW, cl)
def _solve(self, mp):
#define a minimal newton raphson solver
linear_solver = KratosMultiphysics.SkylineLUFactorizationSolver()
builder_and_solver = KratosMultiphysics.ResidualBasedBlockBuilderAndSolver(
linear_solver)
scheme = KratosMultiphysics.ResidualBasedIncrementalUpdateStaticScheme(
)
convergence_criterion = KratosMultiphysics.ResidualCriteria(
1e-14, 1e-20)
convergence_criterion.SetEchoLevel(0)
max_iters = 1
compute_reactions = True
reform_step_dofs = False
calculate_norm_dx = False
move_mesh_flag = True
strategy = KratosMultiphysics.StructuralMechanicsApplication.FormfindingUpdatedReferenceStrategy(
mp, scheme, linear_solver, convergence_criterion, max_iters,
compute_reactions, reform_step_dofs, move_mesh_flag)
strategy.SetEchoLevel(0)
strategy.Check()
#time integration parameters
dt = 1.0
time = 0.0
end_time = 2.0
step = 0
while (time <= end_time):
time = time + dt
step = step + 1
mp.ProcessInfo[KratosMultiphysics.TIME_STEPS] += 1
mp.CloneTimeStep(time)
strategy.Solve()
def _check_results(self, node, displacement_results):
#check that the results are exact on the node
disp = node.GetSolutionStepValue(KratosMultiphysics.DISPLACEMENT)
self.assertAlmostEqual(disp[0], displacement_results[0], 10)
self.assertAlmostEqual(disp[1], displacement_results[1], 10)
self.assertAlmostEqual(disp[2], displacement_results[2], 10)
def _execute_formfinding_test(self, element_name, displacement_results,
do_post_processing):
mp = KratosMultiphysics.ModelPart("solid_part")
mp.SetBufferSize(2)
self._add_variables(mp)
self._apply_material_properties(mp)
self._create_nodes(mp, element_name)
self._add_dofs(mp)
self._create_elements(mp, element_name)
#create a submodelpart for dirichlet boundary conditions
bcs_dirichlet = mp.CreateSubModelPart("BoundaryCondtionsDirichlet")
bcs_dirichlet.AddNodes([1, 2, 3, 4])
self._apply_dirichlet_BCs(bcs_dirichlet)
self._solve(mp)
self._check_results(mp.Nodes[5], displacement_results)
if do_post_processing:
self.__post_process(mp)
def test_formfinding(self):
element_name = "PreStressMembraneElement3D3N"
displacement_results = [0.0, 0.0, -2.16216216216]
self._execute_formfinding_test(element_name, displacement_results,
False) # Do PostProcessing for GiD?
def __post_process(self, main_model_part):
from gid_output_process import GiDOutputProcess
self.gid_output = GiDOutputProcess(
main_model_part, "gid_output",
KratosMultiphysics.Parameters("""
{
"result_file_configuration" : {
"gidpost_flags": {
"GiDPostMode": "GiD_PostBinary",
"WriteDeformedMeshFlag": "WriteUndeformed",
"WriteConditionsFlag": "WriteConditions",
"MultiFileFlag": "SingleFile"
},
"nodal_results" : ["DISPLACEMENT"],
"gauss_point_results" : []
}
}
"""))
self.gid_output.ExecuteInitialize()
self.gid_output.ExecuteBeforeSolutionLoop()
self.gid_output.ExecuteInitializeSolutionStep()
self.gid_output.PrintOutput()
self.gid_output.ExecuteFinalizeSolutionStep()
self.gid_output.ExecuteFinalize()
class BasePatchTestMembrane(KratosUnittest.TestCase):
def _add_variables(self, mp, explicit_dynamics=False):
mp.AddNodalSolutionStepVariable(KratosMultiphysics.DISPLACEMENT)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.REACTION)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.VELOCITY)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.ACCELERATION)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.VOLUME_ACCELERATION)
if explicit_dynamics:
mp.AddNodalSolutionStepVariable(
StructuralMechanicsApplication.MIDDLE_VELOCITY)
mp.AddNodalSolutionStepVariable(
StructuralMechanicsApplication.FRACTIONAL_ACCELERATION)
mp.AddNodalSolutionStepVariable(
StructuralMechanicsApplication.FRACTIONAL_ANGULAR_ACCELERATION)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.NODAL_MASS)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.FORCE_RESIDUAL)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.RESIDUAL_VECTOR)
mp.AddNodalSolutionStepVariable(
StructuralMechanicsApplication.MIDDLE_ANGULAR_VELOCITY)
mp.AddNodalSolutionStepVariable(
StructuralMechanicsApplication.NODAL_INERTIA)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.MOMENT_RESIDUAL)
def _add_dofs(self, mp):
# Adding the dofs AND their corresponding reaction!
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_X, KratosMultiphysics.REACTION_X,
mp)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_Y, KratosMultiphysics.REACTION_Y,
mp)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_Z, KratosMultiphysics.REACTION_Z,
mp)
def _create_nodes_3d3n(self, mp):
mp.CreateNewNode(1, 0.0000000000, 0.0000000000, 1.0000000000)
mp.CreateNewNode(2, 0.1666202260, -0.0055553047, 0.8333333333)
mp.CreateNewNode(3, 0.0000000000, 0.0000000000, 0.6666666667)
mp.CreateNewNode(4, 0.3332937753, -0.0088892271, 1.0000000000)
mp.CreateNewNode(5, 0.3332937816, -0.0088887566, 0.6666666667)
mp.CreateNewNode(6, 0.1666202247, -0.0055553047, 0.5000000000)
mp.CreateNewNode(7, 0.5000001491, -0.0100000000, 0.8333333333)
mp.CreateNewNode(8, 0.0000000000, 0.0000000000, 0.3333333333)
mp.CreateNewNode(9, 0.6667065229, -0.0088892231, 1.0000000000)
mp.CreateNewNode(10, 0.5000000000, -0.0100000000, 0.5000000000)
mp.CreateNewNode(11, 0.3332937816, -0.0088887566, 0.3333333333)
mp.CreateNewNode(12, 0.6667065166, -0.0088887526, 0.6666666667)
mp.CreateNewNode(13, 0.1666202260, -0.0055553047, 0.1666666667)
mp.CreateNewNode(14, 0.8333799231, -0.0055553007, 0.8333333333)
mp.CreateNewNode(15, 0.6667065166, -0.0088887526, 0.3333333333)
mp.CreateNewNode(16, 0.5000001491, -0.0100000000, 0.1666666667)
mp.CreateNewNode(17, 0.8333799243, -0.0055553007, 0.5000000000)
mp.CreateNewNode(18, 0.0000000000, 0.0000000000, 0.0000000000)
mp.CreateNewNode(19, 1.0000000000, 0.0000000000, 1.0000000000)
mp.CreateNewNode(20, 1.0000000000, 0.0000000000, 0.6666666667)
mp.CreateNewNode(21, 0.3332937753, -0.0088892271, 0.0000000000)
mp.CreateNewNode(22, 0.8333799231, -0.0055553007, 0.1666666667)
mp.CreateNewNode(23, 1.0000000000, 0.0000000000, 0.3333333333)
mp.CreateNewNode(24, 0.6667065229, -0.0088892231, 0.0000000000)
mp.CreateNewNode(25, 1.0000000000, 0.0000000000, 0.0000000000)
def _create_nodes_3d4n(self, mp):
mp.CreateNewNode(1, 0.0000000000, 0.0000000000, 1.0000000000)
mp.CreateNewNode(2, 0.0000000000, 0.0000000000, 0.7500000000)
mp.CreateNewNode(3, 0.2499498474, -0.0075002175, 1.0000000000)
mp.CreateNewNode(4, 0.2499498571, -0.0074997471, 0.7500000000)
mp.CreateNewNode(5, 0.0000000000, 0.0000000000, 0.5000000000)
mp.CreateNewNode(6, 0.5000001491, -0.0100004706, 1.0000000000)
mp.CreateNewNode(7, 0.2499498571, -0.0074997471, 0.5000000000)
mp.CreateNewNode(8, 0.5000001491, -0.0100000000, 0.7500000000)
mp.CreateNewNode(9, 0.5000001491, -0.0100000000, 0.5000000000)
mp.CreateNewNode(10, 0.0000000000, 0.0000000000, 0.2500000000)
mp.CreateNewNode(11, 0.7500504508, -0.0075002115, 1.0000000000)
mp.CreateNewNode(12, 0.2499498568, -0.0074997471, 0.2500000000)
mp.CreateNewNode(13, 0.7500504414, -0.0074997411, 0.7500000000)
mp.CreateNewNode(14, 0.5000001491, -0.0100000000, 0.2500000000)
mp.CreateNewNode(15, 0.7500504414, -0.0074997411, 0.5000000000)
mp.CreateNewNode(16, 0.0000000000, 0.0000000000, 0.0000000000)
mp.CreateNewNode(17, 1.0000000000, 0.0000000000, 1.0000000000)
mp.CreateNewNode(18, 1.0000000000, 0.0000000000, 0.7500000000)
mp.CreateNewNode(19, 0.2499498474, -0.0075002175, 0.0000000000)
mp.CreateNewNode(20, 0.7500504414, -0.0074997411, 0.2500000000)
mp.CreateNewNode(21, 1.0000000000, 0.0000000000, 0.5000000000)
mp.CreateNewNode(22, 0.5000001491, -0.0100004706, 0.0000000000)
mp.CreateNewNode(23, 1.0000000000, 0.0000000000, 0.2500000000)
mp.CreateNewNode(24, 0.7500504508, -0.0075002115, 0.0000000000)
mp.CreateNewNode(25, 1.0000000000, 0.0000000000, 0.0000000000)
def _create_elements_3d3n(self, mp):
element_name = "PreStressMembraneElement3D3N"
mp.CreateNewElement(element_name, 1, [21, 13, 18],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 2, [11, 13, 21],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 3, [8, 13, 11],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 4, [18, 13, 8],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 5, [24, 16, 21],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 6, [15, 16, 24],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 7, [11, 16, 15],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 8, [21, 16, 11],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 9, [25, 22, 24],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 10, [23, 22, 25],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 11, [15, 22, 23],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 12, [24, 22, 15],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 13, [11, 6, 8],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 14, [5, 6, 11],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 15, [3, 6, 5], mp.GetProperties()[1])
mp.CreateNewElement(element_name, 16, [8, 6, 3], mp.GetProperties()[1])
mp.CreateNewElement(element_name, 17, [15, 10, 11],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 18, [12, 10, 15],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 19, [5, 10, 12],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 20, [11, 10, 5],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 21, [23, 17, 15],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 22, [20, 17, 23],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 23, [12, 17, 20],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 24, [15, 17, 12],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 25, [5, 2, 3], mp.GetProperties()[1])
mp.CreateNewElement(element_name, 26, [4, 2, 5], mp.GetProperties()[1])
mp.CreateNewElement(element_name, 27, [1, 2, 4], mp.GetProperties()[1])
mp.CreateNewElement(element_name, 28, [3, 2, 1], mp.GetProperties()[1])
mp.CreateNewElement(element_name, 29, [12, 7, 5],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 30, [9, 7, 12],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 31, [4, 7, 9], mp.GetProperties()[1])
mp.CreateNewElement(element_name, 32, [5, 7, 4], mp.GetProperties()[1])
mp.CreateNewElement(element_name, 33, [20, 14, 12],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 34, [19, 14, 20],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 35, [9, 14, 19],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 36, [12, 14, 9],
mp.GetProperties()[1])
def _create_elements_3d4n(self, mp):
element_name = "PreStressMembraneElement3D4N"
mp.CreateNewElement(element_name, 1, [19, 12, 10, 16],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 2, [22, 14, 12, 19],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 3, [24, 20, 14, 22],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 4, [25, 23, 20, 24],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 5, [12, 7, 5, 10],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 6, [14, 9, 7, 12],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 7, [20, 15, 9, 14],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 8, [23, 21, 15, 20],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 9, [7, 4, 2, 5],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 10, [9, 8, 4, 7],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 11, [15, 13, 8, 9],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 12, [21, 18, 13, 15],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 13, [4, 3, 1, 2],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 14, [8, 6, 3, 4],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 15, [13, 11, 6, 8],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 16, [18, 17, 11, 13],
mp.GetProperties()[1])
def _apply_dirichlet_BCs(self, mp):
KratosMultiphysics.VariableUtils().ApplyFixity(
KratosMultiphysics.DISPLACEMENT_X, True, mp.Nodes)
KratosMultiphysics.VariableUtils().ApplyFixity(
KratosMultiphysics.DISPLACEMENT_Y, True, mp.Nodes)
KratosMultiphysics.VariableUtils().ApplyFixity(
KratosMultiphysics.DISPLACEMENT_Z, True, mp.Nodes)
def _apply_self_weight(self, mp):
for node in mp.Nodes:
node.SetSolutionStepValue(KratosMultiphysics.VOLUME_ACCELERATION_Y,
-9.81)
node.SetSolutionStepValue(KratosMultiphysics.VOLUME_ACCELERATION_X,
0.0)
node.SetSolutionStepValue(KratosMultiphysics.VOLUME_ACCELERATION_Z,
0.0)
def _apply_material_properties(self, mp):
#define properties
mp.GetProperties()[1].SetValue(KratosMultiphysics.YOUNG_MODULUS,
1000.0)
mp.GetProperties()[1].SetValue(KratosMultiphysics.POISSON_RATIO, 0.20)
mp.GetProperties()[1].SetValue(KratosMultiphysics.THICKNESS, 0.001)
mp.GetProperties()[1].SetValue(KratosMultiphysics.DENSITY, 700.0)
mp.GetProperties()[1].SetValue(
StructuralMechanicsApplication.RAYLEIGH_ALPHA, 0.03)
mp.GetProperties()[1].SetValue(
StructuralMechanicsApplication.RAYLEIGH_BETA, 0.02)
constitutive_law = StructuralMechanicsApplication.LinearElasticPlaneStress2DLaw(
)
local_axis_1 = KratosMultiphysics.Vector(3)
local_axis_1[0] = 1.0
local_axis_1[1] = 0.0
local_axis_1[2] = 0.0
local_axis_2 = KratosMultiphysics.Vector(3)
local_axis_2[0] = 0.0
local_axis_2[1] = 0.0
local_axis_2[2] = 1.0
mp.GetProperties()[1].SetValue(KratosMultiphysics.CONSTITUTIVE_LAW,
constitutive_law)
mp.GetProperties()[1].SetValue(
StructuralMechanicsApplication.PROJECTION_TYPE_COMBO, "planar")
mp.GetProperties()[1].SetValue(
StructuralMechanicsApplication.PRESTRESS_AXIS_1_GLOBAL,
local_axis_1)
mp.GetProperties()[1].SetValue(
StructuralMechanicsApplication.PRESTRESS_AXIS_2_GLOBAL,
local_axis_2)
prestress = KratosMultiphysics.Vector(3)
prestress[0] = 1e4 #1e4
prestress[1] = 0.0
prestress[2] = 0.0
mp.GetProperties()[1].SetValue(
StructuralMechanicsApplication.PRESTRESS_VECTOR, prestress)
def _solve_static(self, mp):
linear_solver = KratosMultiphysics.SkylineLUFactorizationSolver()
builder_and_solver = KratosMultiphysics.ResidualBasedBlockBuilderAndSolver(
linear_solver)
scheme = KratosMultiphysics.ResidualBasedIncrementalUpdateStaticScheme(
)
convergence_criterion = KratosMultiphysics.ResidualCriteria(1e-6, 1e-9)
convergence_criterion.SetEchoLevel(0)
max_iters = 1000
compute_reactions = False
reform_step_dofs = False
move_mesh_flag = True
strategy = KratosMultiphysics.ResidualBasedNewtonRaphsonStrategy(
mp, scheme, linear_solver, convergence_criterion,
builder_and_solver, max_iters, compute_reactions, reform_step_dofs,
move_mesh_flag)
strategy.SetEchoLevel(0)
strategy.Check()
strategy.Solve()
def _solve_dynamic(self, mp):
#define a minimal newton raphson dynamic solver
damp_factor_m = -0.30
linear_solver = KratosMultiphysics.SkylineLUFactorizationSolver()
builder_and_solver = KratosMultiphysics.ResidualBasedBlockBuilderAndSolver(
linear_solver)
scheme = KratosMultiphysics.ResidualBasedBossakDisplacementScheme(
damp_factor_m)
convergence_criterion = KratosMultiphysics.ResidualCriteria(1e-6, 1e-9)
convergence_criterion.SetEchoLevel(0)
max_iters = 500
compute_reactions = True
reform_step_dofs = False
move_mesh_flag = True
strategy = KratosMultiphysics.ResidualBasedNewtonRaphsonStrategy(
mp, scheme, linear_solver, convergence_criterion,
builder_and_solver, max_iters, compute_reactions, reform_step_dofs,
move_mesh_flag)
strategy.SetEchoLevel(0)
strategy.Check()
strategy.Solve()
def _create_dynamic_explicit_strategy(mp, scheme_name):
if (scheme_name == 'central_differences'):
scheme = StructuralMechanicsApplication.ExplicitCentralDifferencesScheme(
0.00, 0.00, 0.00)
elif scheme_name == 'multi_stage':
scheme = StructuralMechanicsApplication.ExplicitMultiStageKimScheme(
0.33333333333333333)
strategy = StructuralMechanicsApplication.MechanicalExplicitStrategy(
mp, scheme, 0, 0, 1)
strategy.SetEchoLevel(0)
return strategy
def _check_static_results(self, node, displacement_results):
#check that the results are exact on the node
displacement = node.GetSolutionStepValue(
KratosMultiphysics.DISPLACEMENT)
self.assertAlmostEqual(displacement[0], displacement_results[0], 4)
self.assertAlmostEqual(displacement[1], displacement_results[1], 4)
self.assertAlmostEqual(displacement[2], displacement_results[2], 4)
def _check_dynamic_results(self, node, step, displacement_results):
displacement = node.GetSolutionStepValue(
KratosMultiphysics.DISPLACEMENT_Y)
self.assertAlmostEqual(displacement, displacement_results[step], 4)
def _set_and_fill_buffer(self, mp, buffer_size, delta_time):
# Set buffer size
mp.SetBufferSize(buffer_size)
# Fill buffer
time = mp.ProcessInfo[KratosMultiphysics.TIME]
time = time - delta_time * (buffer_size)
mp.ProcessInfo.SetValue(KratosMultiphysics.TIME, time)
for size in range(0, buffer_size):
step = size - (buffer_size - 1)
mp.ProcessInfo.SetValue(KratosMultiphysics.STEP, step)
time = time + delta_time
#delta_time is computed from previous time in process_info
mp.CloneTimeStep(time)
mp.ProcessInfo[KratosMultiphysics.IS_RESTARTED] = False
def _set_up_system_3d3n(self, current_model, explicit_dynamics=False):
mp = current_model.CreateModelPart("Structure")
mp.SetBufferSize(2)
self._add_variables(mp, explicit_dynamics)
self._apply_material_properties(mp)
self._create_nodes_3d3n(mp)
self._add_dofs(mp)
self._create_elements_3d3n(mp)
self._apply_self_weight(mp)
#create a submodelpart for dirichlet boundary conditions
bcs_dirichlet = mp.CreateSubModelPart("BoundaryCondtionsDirichlet")
bcs_dirichlet.AddNodes([1, 3, 8, 18, 19, 20, 23, 25])
self._apply_dirichlet_BCs(bcs_dirichlet)
return mp
def _set_up_system_3d4n(self, current_model):
mp = current_model.CreateModelPart("Structure")
mp.SetBufferSize(2)
self._add_variables(mp)
self._apply_material_properties(mp)
self._create_nodes_3d4n(mp)
self._add_dofs(mp)
self._create_elements_3d4n(mp)
self._apply_self_weight(mp)
#create a submodelpart for dirichlet boundary conditions
bcs_dirichlet = mp.CreateSubModelPart("BoundaryCondtionsDirichlet")
bcs_dirichlet.AddNodes([1, 2, 5, 10, 16, 17, 18, 21, 23, 25])
self._apply_dirichlet_BCs(bcs_dirichlet)
return mp
def __post_process(self, main_model_part):
from gid_output_process import GiDOutputProcess
self.gid_output = GiDOutputProcess(
main_model_part, "gid_output",
KratosMultiphysics.Parameters("""
{
"result_file_configuration" : {
"gidpost_flags": {
"GiDPostMode": "GiD_PostBinary",
"WriteDeformedMeshFlag": "WriteUndeformed",
"WriteConditionsFlag": "WriteConditions",
"MultiFileFlag": "SingleFile"
},
"nodal_results" : ["DISPLACEMENT"],
"gauss_point_results" : []
}
}
"""))
self.gid_output.ExecuteInitialize()
self.gid_output.ExecuteBeforeSolutionLoop()
self.gid_output.ExecuteInitializeSolutionStep()
self.gid_output.PrintOutput()
self.gid_output.ExecuteFinalizeSolutionStep()
self.gid_output.ExecuteFinalize()
def Execute(self):
#mark as STRUCTURE and deactivate the elements that touch the kutta node
for node in self.kutta_model_part.Nodes:
node.Set(KratosMultiphysics.STRUCTURE)
print(self.kutta_model_part)
#compute the distances of the elements of the wake, and decide which ones are wak
if (self.fluid_model_part.ProcessInfo[KratosMultiphysics.DOMAIN_SIZE]
== 2): #2D case
xn = KratosMultiphysics.Vector(3)
self.n = KratosMultiphysics.Vector(3)
self.n[0] = -self.direction[1]
self.n[1] = self.direction[0]
self.n[2] = 0.0
print("normal =", self.n)
for node in self.kutta_model_part.Nodes:
x0 = node.X
y0 = node.Y
for elem in self.fluid_model_part.Elements:
#check in the potentially active portion
potentially_active_portion = False
for elnode in elem.GetNodes():
xn[0] = elnode.X - x0
xn[1] = elnode.Y - y0
xn[2] = 0.0
dx = xn[0] * self.direction[0] + xn[
1] * self.direction[1]
if (dx > 0):
potentially_active_portion = True
break
if (
elnode.Is(KratosMultiphysics.STRUCTURE)
): ##all nodes that touch the kutta nodes are potentiallyactive
potentially_active_portion = True
break
if (potentially_active_portion):
distances = KratosMultiphysics.Vector(
len(elem.GetNodes()))
counter = 0
for elnode in elem.GetNodes():
xn[0] = elnode.X - x0
xn[1] = elnode.Y - y0
xn[2] = 0.0
d = xn[0] * self.n[0] + xn[1] * self.n[1]
if (abs(d) < self.epsilon):
d = self.epsilon
distances[counter] = d
counter += 1
npos = 0
nneg = 0
for d in distances:
if (d < 0):
nneg += 1
else:
npos += 1
if (nneg > 0 and npos > 0):
elem.Set(KratosMultiphysics.MARKER, True)
counter = 0
for elnode in elem.GetNodes():
elnode.SetSolutionStepValue(
KratosMultiphysics.DISTANCE, 0,
distances[counter])
counter += 1
elem.SetValue(
KratosMultiphysics.ELEMENTAL_DISTANCES,
distances)
#for elnode in elem.GetNodes():
#if elnode.Is(KratosMultiphysics.STRUCTURE):
#elem.Set(KratosMultiphysics.ACTIVE,False)
#elem.Set(KratosMultiphysics.MARKER,False)
else: #3D case
import numpy
from stl import mesh #this requires numpy-stl
#initialize the distances to zero on all elements
zero = KratosMultiphysics.Vector(4)
zero[0] = 0
zero[1] = 0
zero[2] = 0
zero[3] = 0
for elem in self.fluid_model_part.Elements:
elem.SetValue(KratosMultiphysics.ELEMENTAL_DISTANCES, zero)
mesh = mesh.Mesh.from_multi_file(self.stl_filename)
wake_mp = KratosMultiphysics.ModelPart("wake_stl")
wake_mp.AddNodalSolutionStepVariable(KratosMultiphysics.DISTANCE)
wake_mp.AddNodalSolutionStepVariable(KratosMultiphysics.VELOCITY)
prop = wake_mp.Properties[0]
node_id = 1
elem_id = 1
for m in mesh:
print(m)
for vertex in m.points:
n1 = wake_mp.CreateNewNode(node_id, float(vertex[0]),
float(vertex[1]),
float(vertex[2]))
node_id += 1
n2 = wake_mp.CreateNewNode(node_id, float(vertex[3]),
float(vertex[4]),
float(vertex[5]))
node_id += 1
n3 = wake_mp.CreateNewNode(node_id, float(vertex[6]),
float(vertex[7]),
float(vertex[8]))
node_id += 1
el = wake_mp.CreateNewElement("Element3D3N", elem_id,
[n1.Id, n2.Id, n3.Id], prop)
elem_id += 1
#CHAPUZA! - to be removed
#for node in wake_mp.Nodes:
#node.X = node.X - 1.0
#node.Y = node.Y -0.001
representation_mp = KratosMultiphysics.ModelPart(
"representation_mp")
distance_calculator = KratosMultiphysics.CalculateSignedDistanceTo3DSkinProcess(
wake_mp, self.fluid_model_part)
distance_calculator.Execute()
for elem in self.fluid_model_part.Elements:
if (elem.Is(KratosMultiphysics.TO_SPLIT)):
elem.Set(KratosMultiphysics.MARKER, True)
#the following MORE OR LESS WORKS
#for elem in self.fluid_model_part.Elements:
#kutta_elem = False
#for node in elem.GetNodes():
#if(node.Is(KratosMultiphysics.STRUCTURE)):
#kutta_elem = True
#if(kutta_elem == True and elem.IsNot(KratosMultiphysics.MARKER)):
#elem.Set(KratosMultiphysics.ACTIVE,False)
#for elem in self.fluid_model_part.Elements:
#kutta_elem = False
#for node in elem.GetNodes():
#if(node.Is(KratosMultiphysics.STRUCTURE)):
#kutta_elem = True
#if(kutta_elem == True and elem.IsNot(KratosMultiphysics.MARKER)):
#d = elem.GetValue(KratosMultiphysics.ELEMENTAL_DISTANCES)
#i = 0
#for node in elem.GetNodes():
#if(node.Is(KratosMultiphysics.STRUCTURE)):
#d[i] = -1e-4
#else:
#d[i] = 1.0
#i+=1
#elem.SetValue(KratosMultiphysics.ELEMENTAL_DISTANCES, d)
#elem.Set(KratosMultiphysics.MARKER,True)
KratosMultiphysics.CompressiblePotentialFlowApplication.KuttaConditionProcess(
self.fluid_model_part).Execute()
##chapuza
#for elem in self.fluid_model_part.Elements:
#d = KratosMultiphysics.Vector(4)
#if(len(d) == 4):
#npos = 0
#nneg = 0
#i = 0
#for node in elem.GetNodes():
##d[i] = node.Z - 2502.5
#if(d[i] >= 0):
#npos += 1
#else:
#nneg += 1
#i += 1
##elem.SetValue(KratosMultiphysics.ELEMENTAL_DISTANCES,d)
#if(npos > 0 and nneg>0):
#elem.Set(KratosMultiphysics.TO_SPLIT,True)
distance_calculator.GenerateSkinModelPart(representation_mp)
i = 200000
for node in representation_mp.Nodes:
node.Id = i
i += 1
i = 2e6
for elem in representation_mp.Elements:
elem.Id = i
i += 1
from gid_output_process import GiDOutputProcess
output_file = "representation_of_wake"
gid_output = GiDOutputProcess(
representation_mp, output_file,
KratosMultiphysics.Parameters("""
{
"result_file_configuration": {
"gidpost_flags": {
"GiDPostMode": "GiD_PostAscii",
"WriteDeformedMeshFlag": "WriteUndeformed",
"WriteConditionsFlag": "WriteConditions",
"MultiFileFlag": "SingleFile"
},
"file_label": "time",
"output_control_type": "step",
"output_frequency": 1.0,
"body_output": true,
"node_output": false,
"skin_output": false,
"plane_output": [],
"nodal_results": [],
"nodal_nonhistorical_results": [],
"nodal_flags_results": [],
"gauss_point_results": [],
"additional_list_files": []
}
}
"""))
gid_output.ExecuteInitialize()
gid_output.ExecuteBeforeSolutionLoop()
gid_output.ExecuteInitializeSolutionStep()
gid_output.PrintOutput()
gid_output.ExecuteFinalizeSolutionStep()
gid_output.ExecuteFinalize()
class TestPatchTestMembrane(KratosUnittest.TestCase):
def _add_variables(self, mp):
mp.AddNodalSolutionStepVariable(KratosMultiphysics.DISPLACEMENT)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.REACTION)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.VELOCITY)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.ACCELERATION)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.VOLUME_ACCELERATION)
def _add_dofs(self, mp):
# Adding the dofs AND their corresponding reaction!
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_X, KratosMultiphysics.REACTION_X,
mp)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_Y, KratosMultiphysics.REACTION_Y,
mp)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_Z, KratosMultiphysics.REACTION_Z,
mp)
def _create_nodes_3d3n(self, mp):
mp.CreateNewNode(1, 0.0000000000, 0.0000000000, 1.0000000000)
mp.CreateNewNode(2, 0.1666202260, -0.0055553047, 0.8333333333)
mp.CreateNewNode(3, 0.0000000000, 0.0000000000, 0.6666666667)
mp.CreateNewNode(4, 0.3332937753, -0.0088892271, 1.0000000000)
mp.CreateNewNode(5, 0.3332937816, -0.0088887566, 0.6666666667)
mp.CreateNewNode(6, 0.1666202247, -0.0055553047, 0.5000000000)
mp.CreateNewNode(7, 0.5000001491, -0.0100000000, 0.8333333333)
mp.CreateNewNode(8, 0.0000000000, 0.0000000000, 0.3333333333)
mp.CreateNewNode(9, 0.6667065229, -0.0088892231, 1.0000000000)
mp.CreateNewNode(10, 0.5000000000, -0.0100000000, 0.5000000000)
mp.CreateNewNode(11, 0.3332937816, -0.0088887566, 0.3333333333)
mp.CreateNewNode(12, 0.6667065166, -0.0088887526, 0.6666666667)
mp.CreateNewNode(13, 0.1666202260, -0.0055553047, 0.1666666667)
mp.CreateNewNode(14, 0.8333799231, -0.0055553007, 0.8333333333)
mp.CreateNewNode(15, 0.6667065166, -0.0088887526, 0.3333333333)
mp.CreateNewNode(16, 0.5000001491, -0.0100000000, 0.1666666667)
mp.CreateNewNode(17, 0.8333799243, -0.0055553007, 0.5000000000)
mp.CreateNewNode(18, 0.0000000000, 0.0000000000, 0.0000000000)
mp.CreateNewNode(19, 1.0000000000, 0.0000000000, 1.0000000000)
mp.CreateNewNode(20, 1.0000000000, 0.0000000000, 0.6666666667)
mp.CreateNewNode(21, 0.3332937753, -0.0088892271, 0.0000000000)
mp.CreateNewNode(22, 0.8333799231, -0.0055553007, 0.1666666667)
mp.CreateNewNode(23, 1.0000000000, 0.0000000000, 0.3333333333)
mp.CreateNewNode(24, 0.6667065229, -0.0088892231, 0.0000000000)
mp.CreateNewNode(25, 1.0000000000, 0.0000000000, 0.0000000000)
def _create_nodes_3d4n(self, mp):
mp.CreateNewNode(1, 0.0000000000, 0.0000000000, 1.0000000000)
mp.CreateNewNode(2, 0.0000000000, 0.0000000000, 0.7500000000)
mp.CreateNewNode(3, 0.2499498474, -0.0075002175, 1.0000000000)
mp.CreateNewNode(4, 0.2499498571, -0.0074997471, 0.7500000000)
mp.CreateNewNode(5, 0.0000000000, 0.0000000000, 0.5000000000)
mp.CreateNewNode(6, 0.5000001491, -0.0100004706, 1.0000000000)
mp.CreateNewNode(7, 0.2499498571, -0.0074997471, 0.5000000000)
mp.CreateNewNode(8, 0.5000001491, -0.0100000000, 0.7500000000)
mp.CreateNewNode(9, 0.5000001491, -0.0100000000, 0.5000000000)
mp.CreateNewNode(10, 0.0000000000, 0.0000000000, 0.2500000000)
mp.CreateNewNode(11, 0.7500504508, -0.0075002115, 1.0000000000)
mp.CreateNewNode(12, 0.2499498568, -0.0074997471, 0.2500000000)
mp.CreateNewNode(13, 0.7500504414, -0.0074997411, 0.7500000000)
mp.CreateNewNode(14, 0.5000001491, -0.0100000000, 0.2500000000)
mp.CreateNewNode(15, 0.7500504414, -0.0074997411, 0.5000000000)
mp.CreateNewNode(16, 0.0000000000, 0.0000000000, 0.0000000000)
mp.CreateNewNode(17, 1.0000000000, 0.0000000000, 1.0000000000)
mp.CreateNewNode(18, 1.0000000000, 0.0000000000, 0.7500000000)
mp.CreateNewNode(19, 0.2499498474, -0.0075002175, 0.0000000000)
mp.CreateNewNode(20, 0.7500504414, -0.0074997411, 0.2500000000)
mp.CreateNewNode(21, 1.0000000000, 0.0000000000, 0.5000000000)
mp.CreateNewNode(22, 0.5000001491, -0.0100004706, 0.0000000000)
mp.CreateNewNode(23, 1.0000000000, 0.0000000000, 0.2500000000)
mp.CreateNewNode(24, 0.7500504508, -0.0075002115, 0.0000000000)
mp.CreateNewNode(25, 1.0000000000, 0.0000000000, 0.0000000000)
def _create_elements_3d3n(self, mp):
element_name = "PreStressMembraneElement3D3N"
mp.CreateNewElement(element_name, 1, [21, 13, 18],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 2, [11, 13, 21],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 3, [8, 13, 11],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 4, [18, 13, 8],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 5, [24, 16, 21],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 6, [15, 16, 24],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 7, [11, 16, 15],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 8, [21, 16, 11],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 9, [25, 22, 24],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 10, [23, 22, 25],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 11, [15, 22, 23],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 12, [24, 22, 15],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 13, [11, 6, 8],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 14, [5, 6, 11],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 15, [3, 6, 5], mp.GetProperties()[1])
mp.CreateNewElement(element_name, 16, [8, 6, 3], mp.GetProperties()[1])
mp.CreateNewElement(element_name, 17, [15, 10, 11],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 18, [12, 10, 15],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 19, [5, 10, 12],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 20, [11, 10, 5],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 21, [23, 17, 15],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 22, [20, 17, 23],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 23, [12, 17, 20],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 24, [15, 17, 12],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 25, [5, 2, 3], mp.GetProperties()[1])
mp.CreateNewElement(element_name, 26, [4, 2, 5], mp.GetProperties()[1])
mp.CreateNewElement(element_name, 27, [1, 2, 4], mp.GetProperties()[1])
mp.CreateNewElement(element_name, 28, [3, 2, 1], mp.GetProperties()[1])
mp.CreateNewElement(element_name, 29, [12, 7, 5],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 30, [9, 7, 12],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 31, [4, 7, 9], mp.GetProperties()[1])
mp.CreateNewElement(element_name, 32, [5, 7, 4], mp.GetProperties()[1])
mp.CreateNewElement(element_name, 33, [20, 14, 12],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 34, [19, 14, 20],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 35, [9, 14, 19],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 36, [12, 14, 9],
mp.GetProperties()[1])
def _create_elements_3d4n(self, mp):
element_name = "PreStressMembraneElement3D4N"
mp.CreateNewElement(element_name, 1, [19, 12, 10, 16],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 2, [22, 14, 12, 19],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 3, [24, 20, 14, 22],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 4, [25, 23, 20, 24],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 5, [12, 7, 5, 10],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 6, [14, 9, 7, 12],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 7, [20, 15, 9, 14],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 8, [23, 21, 15, 20],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 9, [7, 4, 2, 5],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 10, [9, 8, 4, 7],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 11, [15, 13, 8, 9],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 12, [21, 18, 13, 15],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 13, [4, 3, 1, 2],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 14, [8, 6, 3, 4],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 15, [13, 11, 6, 8],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 16, [18, 17, 11, 13],
mp.GetProperties()[1])
def _apply_dirichlet_BCs(self, mp):
KratosMultiphysics.VariableUtils().ApplyFixity(
KratosMultiphysics.DISPLACEMENT_X, True, mp.Nodes)
KratosMultiphysics.VariableUtils().ApplyFixity(
KratosMultiphysics.DISPLACEMENT_Y, True, mp.Nodes)
KratosMultiphysics.VariableUtils().ApplyFixity(
KratosMultiphysics.DISPLACEMENT_Z, True, mp.Nodes)
def _apply_self_weight(self, mp):
for node in mp.Nodes:
node.SetSolutionStepValue(KratosMultiphysics.VOLUME_ACCELERATION_Y,
-9.81)
node.SetSolutionStepValue(KratosMultiphysics.VOLUME_ACCELERATION_X,
0.0)
node.SetSolutionStepValue(KratosMultiphysics.VOLUME_ACCELERATION_Z,
0.0)
def _apply_material_properties(self, mp):
#define properties
mp.GetProperties()[1].SetValue(KratosMultiphysics.YOUNG_MODULUS,
1000.0)
mp.GetProperties()[1].SetValue(KratosMultiphysics.POISSON_RATIO, 0.20)
mp.GetProperties()[1].SetValue(KratosMultiphysics.THICKNESS, 0.001)
mp.GetProperties()[1].SetValue(KratosMultiphysics.DENSITY, 700.0)
mp.GetProperties()[1].SetValue(
StructuralMechanicsApplication.RAYLEIGH_ALPHA, 0.03)
mp.GetProperties()[1].SetValue(
StructuralMechanicsApplication.RAYLEIGH_BETA, 0.02)
constitutive_law = StructuralMechanicsApplication.LinearElasticPlaneStress2DLaw(
)
local_axis_1 = KratosMultiphysics.Vector(3)
local_axis_1[0] = 1.0
local_axis_1[1] = 0.0
local_axis_1[2] = 0.0
local_axis_2 = KratosMultiphysics.Vector(3)
local_axis_2[0] = 0.0
local_axis_2[1] = 0.0
local_axis_2[2] = 1.0
mp.GetProperties()[1].SetValue(KratosMultiphysics.CONSTITUTIVE_LAW,
constitutive_law)
mp.GetProperties()[1].SetValue(
StructuralMechanicsApplication.PROJECTION_TYPE_COMBO, "planar")
mp.GetProperties()[1].SetValue(
StructuralMechanicsApplication.PRESTRESS_AXIS_1_GLOBAL,
local_axis_1)
mp.GetProperties()[1].SetValue(
StructuralMechanicsApplication.PRESTRESS_AXIS_2_GLOBAL,
local_axis_2)
prestress = KratosMultiphysics.Vector(3)
prestress[0] = 1e4 #1e4
prestress[1] = 0.0
prestress[2] = 0.0
mp.GetProperties()[1].SetValue(
StructuralMechanicsApplication.PRESTRESS_VECTOR, prestress)
def _solve_static(self, mp):
linear_solver = KratosMultiphysics.SkylineLUFactorizationSolver()
builder_and_solver = KratosMultiphysics.ResidualBasedBlockBuilderAndSolver(
linear_solver)
scheme = KratosMultiphysics.ResidualBasedIncrementalUpdateStaticScheme(
)
convergence_criterion = StructuralMechanicsApplication.DisplacementAndOtherDoFCriteria(
1e-15, 1e-15)
convergence_criterion.SetEchoLevel(0)
max_iters = 1000
compute_reactions = False
reform_step_dofs = False
move_mesh_flag = True
strategy = KratosMultiphysics.ResidualBasedNewtonRaphsonStrategy(
mp, scheme, linear_solver, convergence_criterion,
builder_and_solver, max_iters, compute_reactions, reform_step_dofs,
move_mesh_flag)
strategy.SetEchoLevel(0)
strategy.Check()
strategy.Solve()
def _solve_dynamic(self, mp):
#define a minimal newton raphson dynamic solver
damp_factor_m = -0.30
linear_solver = KratosMultiphysics.SkylineLUFactorizationSolver()
builder_and_solver = KratosMultiphysics.ResidualBasedBlockBuilderAndSolver(
linear_solver)
scheme = KratosMultiphysics.ResidualBasedBossakDisplacementScheme(
damp_factor_m)
convergence_criterion = KratosMultiphysics.ResidualCriteria(1e-6, 1e-9)
convergence_criterion.SetEchoLevel(0)
max_iters = 500
compute_reactions = True
reform_step_dofs = False
move_mesh_flag = True
strategy = KratosMultiphysics.ResidualBasedNewtonRaphsonStrategy(
mp, scheme, linear_solver, convergence_criterion,
builder_and_solver, max_iters, compute_reactions, reform_step_dofs,
move_mesh_flag)
strategy.SetEchoLevel(0)
strategy.Check()
strategy.Solve()
def _check_static_results(self, node, displacement_results):
#check that the results are exact on the node
displacement = node.GetSolutionStepValue(
KratosMultiphysics.DISPLACEMENT)
self.assertAlmostEqual(displacement[0], displacement_results[0], 4)
self.assertAlmostEqual(displacement[1], displacement_results[1], 4)
self.assertAlmostEqual(displacement[2], displacement_results[2], 4)
def _check_dynamic_results(self, node, step, displacement_results):
displacement = node.GetSolutionStepValue(
KratosMultiphysics.DISPLACEMENT_Y)
self.assertAlmostEqual(displacement, displacement_results[step], 4)
def _set_and_fill_buffer(self, mp, buffer_size, delta_time):
# Set buffer size
mp.SetBufferSize(buffer_size)
# Fill buffer
time = mp.ProcessInfo[KratosMultiphysics.TIME]
time = time - delta_time * (buffer_size)
mp.ProcessInfo.SetValue(KratosMultiphysics.TIME, time)
for size in range(0, buffer_size):
step = size - (buffer_size - 1)
mp.ProcessInfo.SetValue(KratosMultiphysics.STEP, step)
time = time + delta_time
#delta_time is computed from previous time in process_info
mp.CloneTimeStep(time)
mp.ProcessInfo[KratosMultiphysics.IS_RESTARTED] = False
def _set_up_system_3d3n(self, current_model):
mp = current_model.CreateModelPart("Structure")
mp.SetBufferSize(2)
self._add_variables(mp)
self._apply_material_properties(mp)
self._create_nodes_3d3n(mp)
self._add_dofs(mp)
self._create_elements_3d3n(mp)
self._apply_self_weight(mp)
#create a submodelpart for dirichlet boundary conditions
bcs_dirichlet = mp.CreateSubModelPart("BoundaryCondtionsDirichlet")
bcs_dirichlet.AddNodes([1, 3, 8, 18, 19, 20, 23, 25])
self._apply_dirichlet_BCs(bcs_dirichlet)
return mp
def _set_up_system_3d4n(self, current_model):
mp = current_model.CreateModelPart("Structure")
mp.SetBufferSize(2)
self._add_variables(mp)
self._apply_material_properties(mp)
self._create_nodes_3d4n(mp)
self._add_dofs(mp)
self._create_elements_3d4n(mp)
self._apply_self_weight(mp)
#create a submodelpart for dirichlet boundary conditions
bcs_dirichlet = mp.CreateSubModelPart("BoundaryCondtionsDirichlet")
bcs_dirichlet.AddNodes([1, 2, 5, 10, 16, 17, 18, 21, 23, 25])
self._apply_dirichlet_BCs(bcs_dirichlet)
return mp
def test_membrane_3d3n_static(self):
displacement_results = [-4.628753e-12, -0.04937043, -6.483677e-12]
current_model = KratosMultiphysics.Model()
mp = self._set_up_system_3d3n(current_model)
self._solve_static(mp)
self._check_static_results(mp.Nodes[10], displacement_results)
#self.__post_process(mp)
def test_membrane_3d4n_static(self):
displacement_results = [1.73962e-07, -0.05202096, -1.243591e-08]
current_model = KratosMultiphysics.Model()
mp = self._set_up_system_3d4n(current_model)
self._solve_static(mp)
self._check_static_results(mp.Nodes[9], displacement_results)
#self.__post_process(mp)
def test_membrane_3d3n_dynamic(self):
displacement_results = [
-0.004145456940147508, -0.016577305470262357,
-0.036009405854487204, -0.05724634378436276, -0.07431594485756908,
-0.08286293670959116, -0.08158307966494918, -0.07223491977349739,
-0.058530143571647514, -0.044671016341598674, -0.03417034853894327
]
current_model = KratosMultiphysics.Model()
mp = self._set_up_system_3d3n(current_model)
#time integration parameters
dt = 0.05
time = 0.0
end_time = 0.5
step = 0
self._set_and_fill_buffer(mp, 2, dt)
while (time <= end_time):
time = time + dt
step = step + 1
mp.CloneTimeStep(time)
self._solve_dynamic(mp)
self._check_dynamic_results(mp.Nodes[10], step - 1,
displacement_results)
#self.__post_process(mp)
def test_membrane_3d4n_dynamic(self):
displacement_results = [
-0.004416597413161373, -0.017672715828946108, -0.0383282878649957,
-0.060720299929014065, -0.07850778062395564, -0.08727738281567025,
-0.08586880143129107, -0.07618411850603453, -0.06201094423792496,
-0.04762424029880159, -0.03666158466786426
]
current_model = KratosMultiphysics.Model()
mp = self._set_up_system_3d4n(current_model)
#time integration parameters
dt = 0.05
time = 0.0
end_time = 0.5
step = 0
self._set_and_fill_buffer(mp, 2, dt)
while (time <= end_time):
time = time + dt
step = step + 1
mp.CloneTimeStep(time)
self._solve_dynamic(mp)
self._check_dynamic_results(mp.Nodes[9], step - 1,
displacement_results)
#self.__post_process(mp)
def __post_process(self, main_model_part):
from gid_output_process import GiDOutputProcess
self.gid_output = GiDOutputProcess(
main_model_part, "gid_output",
KratosMultiphysics.Parameters("""
{
"result_file_configuration" : {
"gidpost_flags": {
"GiDPostMode": "GiD_PostBinary",
"WriteDeformedMeshFlag": "WriteUndeformed",
"WriteConditionsFlag": "WriteConditions",
"MultiFileFlag": "SingleFile"
},
"nodal_results" : ["DISPLACEMENT"],
"gauss_point_results" : []
}
}
"""))
self.gid_output.ExecuteInitialize()
self.gid_output.ExecuteBeforeSolutionLoop()
self.gid_output.ExecuteInitializeSolutionStep()
self.gid_output.PrintOutput()
self.gid_output.ExecuteFinalizeSolutionStep()
self.gid_output.ExecuteFinalize()
class TestMortarMapperCore(KratosUnittest.TestCase):
def setUp(self):
pass
def __base_test_mapping(self, input_filename, num_nodes, master_num_nodes,
pure_implicit, inverted, discontinuous):
KratosMultiphysics.Logger.GetDefaultOutput().SetSeverity(
KratosMultiphysics.Logger.Severity.WARNING)
self.model = KratosMultiphysics.Model()
self.main_model_part = self.model.CreateModelPart("Main", 2)
self.main_model_part.AddNodalSolutionStepVariable(
KratosMultiphysics.DISPLACEMENT)
self.main_model_part.AddNodalSolutionStepVariable(
KratosMultiphysics.TEMPERATURE)
self.main_model_part.AddNodalSolutionStepVariable(
KratosMultiphysics.NORMAL)
self.main_model_part.CloneTimeStep(1.01)
KratosMultiphysics.ModelPartIO(input_filename).ReadModelPart(
self.main_model_part)
## DEBUG Generate discontinous case
#self.__generate_discontinous_case(inverted)
if inverted:
self.model_part_slave = self.main_model_part.GetSubModelPart(
"Parts_Parts_Auto2")
self.model_part_master = self.main_model_part.GetSubModelPart(
"Parts_Parts_Auto1")
else:
self.model_part_slave = self.main_model_part.GetSubModelPart(
"Parts_Parts_Auto1")
self.model_part_master = self.main_model_part.GetSubModelPart(
"Parts_Parts_Auto2")
for node in self.model_part_master.Nodes:
x = node.X
y = node.Y
z = node.Z
node.SetSolutionStepValue(KratosMultiphysics.TEMPERATURE, z)
node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT_X, x)
node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT_Y, y)
node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT_Z, z)
del (node)
map_parameters = KratosMultiphysics.Parameters("""
{
"echo_level" : 0,
"absolute_convergence_tolerance" : 1.0e-9,
"relative_convergence_tolerance" : 1.0e-4,
"max_number_iterations" : 10,
"integration_order" : 2,
"origin_variable" : "TEMPERATURE",
"discontinuous_interface" : false
}
""")
map_parameters["discontinuous_interface"].SetBool(discontinuous)
if pure_implicit:
#linear_solver = ExternalSolversApplication.SuperLUSolver()
linear_solver = KratosMultiphysics.SkylineLUFactorizationSolver()
else:
linear_solver = None
self.mortar_mapping_double = KratosMultiphysics.SimpleMortarMapperProcess(
self.model_part_master, self.model_part_slave, map_parameters,
linear_solver)
map_parameters["origin_variable"].SetString("DISPLACEMENT")
self.mortar_mapping_vector = KratosMultiphysics.SimpleMortarMapperProcess(
self.model_part_master, self.model_part_slave, map_parameters,
linear_solver)
def _mapper_tests(self,
input_filename,
num_nodes,
master_num_nodes,
pure_implicit=False,
inverted=False,
discontinuous=False):
self.__base_test_mapping(input_filename, num_nodes, master_num_nodes,
pure_implicit, inverted, discontinuous)
self.mortar_mapping_double.Execute()
self.mortar_mapping_vector.Execute()
# Debug postprocess file
#self.__post_process()
import from_json_check_result_process
check_parameters = KratosMultiphysics.Parameters("""
{
"check_variables" : ["TEMPERATURE","DISPLACEMENT"],
"input_file_name" : "",
"model_part_name" : "Main",
"sub_model_part_name" : "Parts_Parts_Auto1"
}
""")
if inverted:
check_parameters["input_file_name"].SetString(input_filename +
"_inverted.json")
else:
check_parameters["input_file_name"].SetString(input_filename +
".json")
check = from_json_check_result_process.FromJsonCheckResultProcess(
self.model, check_parameters)
check.ExecuteInitialize()
check.ExecuteBeforeSolutionLoop()
check.ExecuteFinalizeSolutionStep()
## The following is used to create the solution database
#import json_output_process
#out_parameters = KratosMultiphysics.Parameters("""
#{
#"output_variables" : ["TEMPERATURE","DISPLACEMENT"],
#"output_file_name" : "",
#"model_part_name" : "Main",
#"sub_model_part_name" : "Parts_Parts_Auto1"
#}
#""")
#if inverted:
#out_parameters["output_file_name"].SetString(input_filename+"_inverted.json")
#else:
#out_parameters["output_file_name"].SetString(input_filename+".json")
#out = json_output_process.JsonOutputProcess(self.model, out_parameters)
#out.ExecuteInitialize()
#out.ExecuteBeforeSolutionLoop()
#out.ExecuteFinalizeSolutionStep()
def test_less_basic_mortar_mapping_triangle_pure_implicit(self):
input_filename = os.path.dirname(
os.path.realpath(__file__)
) + "/auxiliar_files_for_python_unnitest/mortar_mapper_python_tests/test_integration_several_triangles"
self._mapper_tests(input_filename, 3, 3, True)
def test_less_basic_mortar_mapping_triangle(self):
input_filename = os.path.dirname(
os.path.realpath(__file__)
) + "/auxiliar_files_for_python_unnitest/mortar_mapper_python_tests/test_integration_several_triangles"
self._mapper_tests(input_filename, 3, 3)
def test_simple_curvature_mortar_mapping_triangle(self):
input_filename = os.path.dirname(
os.path.realpath(__file__)
) + "/auxiliar_files_for_python_unnitest/mortar_mapper_python_tests/test_simple_curvature"
self._mapper_tests(input_filename, 3, 3)
def test_mortar_mapping_triangle(self):
input_filename = os.path.dirname(
os.path.realpath(__file__)
) + "/auxiliar_files_for_python_unnitest/mortar_mapper_python_tests/test_double_curvature_integration_triangle"
self._mapper_tests(input_filename, 3, 3)
def test_mortar_mapping_triangle_discontinous_interface(self):
input_filename = os.path.dirname(
os.path.realpath(__file__)
) + "/auxiliar_files_for_python_unnitest/mortar_mapper_python_tests/test_double_curvature_integration_triangle_discontinous_interface"
self._mapper_tests(input_filename, 3, 3, False, False, True)
def test_mortar_mapping_quad(self):
input_filename = os.path.dirname(
os.path.realpath(__file__)
) + "/auxiliar_files_for_python_unnitest/mortar_mapper_python_tests/test_double_curvature_integration_quadrilateral"
self._mapper_tests(input_filename, 4, 4)
def test_mortar_mapping_quad_tri(self):
input_filename = os.path.dirname(
os.path.realpath(__file__)
) + "/auxiliar_files_for_python_unnitest/mortar_mapper_python_tests/test_double_curvature_integration_triangle_quadrilateral"
self._mapper_tests(input_filename, 4, 3)
def test_mortar_mapping_tri_quad(self):
input_filename = os.path.dirname(
os.path.realpath(__file__)
) + "/auxiliar_files_for_python_unnitest/mortar_mapper_python_tests/test_double_curvature_integration_triangle_quadrilateral"
self._mapper_tests(input_filename, 3, 4, False, True)
def __post_process(self, debug="GiD"):
if debug == "GiD":
from gid_output_process import GiDOutputProcess
self.gid_output = GiDOutputProcess(
self.main_model_part, "gid_output",
KratosMultiphysics.Parameters("""
{
"result_file_configuration" : {
"gidpost_flags": {
"GiDPostMode": "GiD_PostBinary",
"WriteDeformedMeshFlag": "WriteUndeformed",
"WriteConditionsFlag": "WriteConditionsOnly",
"MultiFileFlag": "SingleFile"
},
"nodal_results" : ["DISPLACEMENT","NORMAL","TEMPERATURE"],
"nodal_nonhistorical_results": ["NODAL_AREA","NODAL_MAUX","NODAL_VAUX"]
}
}
"""))
self.gid_output.ExecuteInitialize()
self.gid_output.ExecuteBeforeSolutionLoop()
self.gid_output.ExecuteInitializeSolutionStep()
self.gid_output.PrintOutput()
self.gid_output.ExecuteFinalizeSolutionStep()
self.gid_output.ExecuteFinalize()
elif debug == "VTK":
from vtk_output_process import VtkOutputProcess
self.vtk_output_process = VtkOutputProcess(
self.model,
KratosMultiphysics.Parameters("""{
"model_part_name" : "Main",
"nodal_solution_step_data_variables" : ["DISPLACEMENT","NORMAL","TEMPERATURE"],
"nodal_data_value_variables": ["NODAL_AREA","NODAL_MAUX","NODAL_VAUX"]
}
"""))
self.vtk_output_process.ExecuteInitialize()
self.vtk_output_process.ExecuteBeforeSolutionLoop()
self.vtk_output_process.ExecuteInitializeSolutionStep()
self.vtk_output_process.PrintOutput()
self.vtk_output_process.ExecuteFinalizeSolutionStep()
self.vtk_output_process.ExecuteFinalize()
def __generate_discontinous_case(self, inverted):
counter_nodes = 0
for node in self.main_model_part.Nodes:
counter_nodes += 1
counter_conditions = 0
for cond in self.main_model_part.Conditions:
counter_conditions += 1
if inverted:
self.model_part_slave = self.main_model_part.GetSubModelPart(
"Parts_Parts_Auto2")
self.model_part_master = self.main_model_part.GetSubModelPart(
"Parts_Parts_Auto1")
else:
self.model_part_slave = self.main_model_part.GetSubModelPart(
"Parts_Parts_Auto1")
self.model_part_master = self.main_model_part.GetSubModelPart(
"Parts_Parts_Auto2")
for cond in self.model_part_slave.Conditions:
counter_conditions += 1
length = cond.GetGeometry().Area() * 0.01
list_nodes = []
for node in cond.GetNodes():
counter_nodes += 1
list_nodes.append(counter_nodes)
self.model_part_slave.CreateNewNode(counter_nodes,
node.X + length,
node.Y - length, node.Z)
node.Set(KratosMultiphysics.TO_ERASE)
cond.Set(KratosMultiphysics.TO_ERASE)
self.model_part_slave.CreateNewCondition(
"SurfaceCondition3D3N", counter_conditions, list_nodes,
self.main_model_part.GetProperties()[1])
self.main_model_part.RemoveNodesFromAllLevels(
KratosMultiphysics.TO_ERASE)
self.main_model_part.RemoveConditionsFromAllLevels(
KratosMultiphysics.TO_ERASE)
# Debug
#self.__post_process()
model_part_io = KratosMultiphysics.ModelPartIO(
GetFilePath(
"test_double_curvature_integration_triangle_discontinous_interface"
), KratosMultiphysics.IO.WRITE)
model_part_io.WriteModelPart(self.main_model_part)
def __sci_str(self, x):
from decimal import Decimal
s = 10 * Decimal(str(x))
s = ('{:.' + str(len(s.normalize().as_tuple().digits) - 1) +
'E}').format(s)
s = s.replace('E+', 'D0')
s = s.replace('E-', 'D0-')
s = s.replace('.', '')
if s.startswith('-'):
return '-.' + s[1:]
else:
return '.' + s
class DesignLoggerGID(DesignLogger):
# --------------------------------------------------------------------------
def __init__(self, ModelPartController, OptimizationSettings):
self.OptimizationModelPart = ModelPartController.GetOptimizationModelPart(
)
self.DesignSurface = ModelPartController.GetDesignSurface()
self.OutputSettings = OptimizationSettings["output"]
self.__DetermineOutputMode()
self.__CreateGiDIO()
# --------------------------------------------------------------------------
def __DetermineOutputMode(self):
OutputMode = self.OutputSettings["design_output_mode"].GetString()
self.WriteDesignSurface = False
self.WriteOptimizationModelPart = False
if OutputMode == "WriteDesignSurface":
self.WriteDesignSurface = True
elif OutputMode == "WriteOptimizationModelPart":
if self.OptimizationModelPart.NumberOfElements() == 0:
raise NameError(
"Output of optimization model part in Gid-format requires definition of elements. No elements are given in current mdpa! You may change the design output mode."
)
self.WriteOptimizationModelPart = True
else:
raise NameError(
"The following design output mode is not defined within a GiD output (name may be misspelled): "
+ OutputMode)
# --------------------------------------------------------------------------
def __CreateGiDIO(self):
self.__ModifySettingsToMatchDefaultGiDOutputProcess()
GidConfig = self.OutputSettings["output_format"]["gid_configuration"]
ResultsDirectory = self.OutputSettings["output_directory"].GetString()
DesignHistoryFilename = self.OutputSettings[
"design_history_filename"].GetString()
DesignHistoryFilenameWithPath = ResultsDirectory + "/" + DesignHistoryFilename
if self.WriteDesignSurface:
self.GidIO = GiDOutputProcess(self.DesignSurface,
DesignHistoryFilenameWithPath,
GidConfig)
elif self.WriteOptimizationModelPart:
self.GidIO = GiDOutputProcess(self.OptimizationModelPart,
DesignHistoryFilenameWithPath,
GidConfig)
# --------------------------------------------------------------------------
def __ModifySettingsToMatchDefaultGiDOutputProcess(self):
self.__AddNodalResultsToGidConfiguration()
self.__SetConditionsFlagAccordingOutputMode()
# --------------------------------------------------------------------------
def __AddNodalResultsToGidConfiguration(self):
NodalResults = self.OutputSettings["nodal_results"]
self.OutputSettings["output_format"]["gid_configuration"][
"result_file_configuration"].AddValue("nodal_results",
NodalResults)
# --------------------------------------------------------------------------
def __SetConditionsFlagAccordingOutputMode(self):
GidConfig = self.OutputSettings["output_format"]["gid_configuration"]
if not GidConfig["result_file_configuration"]["gidpost_flags"].Has(
"WriteConditionsFlag"):
GidConfig["result_file_configuration"][
"gidpost_flags"].AddEmptyValue("WriteConditionsFlag")
if self.WriteDesignSurface:
GidConfig["result_file_configuration"]["gidpost_flags"][
"WriteConditionsFlag"].SetString("WriteConditions")
elif self.WriteOptimizationModelPart:
GidConfig["result_file_configuration"]["gidpost_flags"][
"WriteConditionsFlag"].SetString("WriteElementsOnly")
# --------------------------------------------------------------------------
def InitializeLogging(self):
self.GidIO.ExecuteInitialize()
self.GidIO.ExecuteBeforeSolutionLoop()
# --------------------------------------------------------------------------
def LogCurrentDesign(self, optimizationIteration):
OriginalTime = self.OptimizationModelPart.ProcessInfo[TIME]
self.OptimizationModelPart.ProcessInfo[TIME] = optimizationIteration
self.GidIO.ExecuteInitializeSolutionStep()
if (self.GidIO.IsOutputStep()):
self.GidIO.PrintOutput()
self.GidIO.ExecuteFinalizeSolutionStep()
self.OptimizationModelPart.ProcessInfo[TIME] = OriginalTime
# --------------------------------------------------------------------------
def FinalizeLogging(self):
self.GidIO.ExecuteFinalize()
class KratosExecuteMokBenchmark(KratosUnittest.TestCase):
def __init__(self, ProjectParameters):
self.ProjectParameters = ProjectParameters
## Fluid-Structure model parts definition
self.structure_main_model_part = ModelPart(
self.ProjectParameters["structure_solver_settings"]["problem_data"]
["model_part_name"].GetString())
self.structure_main_model_part.ProcessInfo.SetValue(
DOMAIN_SIZE, self.ProjectParameters["structure_solver_settings"]
["problem_data"]["domain_size"].GetInt())
self.fluid_main_model_part = ModelPart(
self.ProjectParameters["fluid_solver_settings"]["problem_data"]
["model_part_name"].GetString())
self.fluid_main_model_part.ProcessInfo.SetValue(
DOMAIN_SIZE, self.ProjectParameters["fluid_solver_settings"]
["problem_data"]["domain_size"].GetInt())
FluidModel = {
self.ProjectParameters["fluid_solver_settings"]["problem_data"]["model_part_name"].GetString(
):
self.fluid_main_model_part
}
SolidModel = {
self.ProjectParameters["structure_solver_settings"]["problem_data"]["model_part_name"].GetString(
):
self.structure_main_model_part
}
## Solver construction
solver_module = __import__(
"partitioned_fsi_solver"
) # Currently there is only one FSI solver up to date
self.solver = solver_module.CreateSolver(
self.structure_main_model_part, self.fluid_main_model_part,
self.ProjectParameters)
self.solver.AddVariables()
## Read the model - note that SetBufferSize is done here
self.solver.ImportModelPart()
## Add AddDofs
self.solver.AddDofs()
## Initialize GiD I/O
self.output_post = False # Set this variable to True if it is need to print the results for debugging purposes
if (self.output_post == True):
from gid_output_process import GiDOutputProcess
self.gid_output_structure = GiDOutputProcess(
self.solver.structure_solver.GetComputingModelPart(),
self.ProjectParameters["structure_solver_settings"]
["problem_data"]["problem_name"].GetString() + "_structure",
self.ProjectParameters["structure_solver_settings"]
["output_configuration"])
self.gid_output_fluid = GiDOutputProcess(
self.solver.fluid_solver.GetComputingModelPart(),
self.ProjectParameters["fluid_solver_settings"]["problem_data"]
["problem_name"].GetString() + "_fluid",
self.ProjectParameters["fluid_solver_settings"]
["output_configuration"])
self.gid_output_structure.ExecuteInitialize()
self.gid_output_fluid.ExecuteInitialize()
## Get the list of the skin submodel parts in the object Model (FLUID)
for i in range(self.ProjectParameters["fluid_solver_settings"]
["solver_settings"]["skin_parts"].size()):
skin_part_name = self.ProjectParameters["fluid_solver_settings"][
"solver_settings"]["skin_parts"][i].GetString()
FluidModel.update({
skin_part_name:
self.fluid_main_model_part.GetSubModelPart(skin_part_name)
})
## Get the list of the no-skin submodel parts in the object Model (FLUID)
for i in range(self.ProjectParameters["fluid_solver_settings"]
["solver_settings"]["no_skin_parts"].size()):
no_skin_part_name = self.ProjectParameters[
"fluid_solver_settings"]["solver_settings"]["no_skin_parts"][
i].GetString()
FluidModel.update({
no_skin_part_name:
self.fluid_main_model_part.GetSubModelPart(no_skin_part_name)
})
## Get the list of the initial conditions submodel parts in the object Model (FLUID)
for i in range(self.ProjectParameters["fluid_solver_settings"]
["initial_conditions_process_list"].size()):
initial_cond_part_name = self.ProjectParameters[
"fluid_solver_settings"]["initial_conditions_process_list"][i][
"Parameters"]["model_part_name"].GetString()
FluidModel.update({
initial_cond_part_name:
self.fluid_main_model_part.GetSubModelPart(
initial_cond_part_name)
})
## Get the gravity submodel part in the object Model (FLUID)
for i in range(self.ProjectParameters["fluid_solver_settings"]
["gravity"].size()):
gravity_part_name = self.ProjectParameters[
"fluid_solver_settings"]["gravity"][i]["Parameters"][
"model_part_name"].GetString()
FluidModel.update({
gravity_part_name:
self.fluid_main_model_part.GetSubModelPart(gravity_part_name)
})
## Get the list of the submodel part in the object Model (STRUCTURE)
for i in range(
self.ProjectParameters["structure_solver_settings"]
["solver_settings"]["processes_sub_model_part_list"].size()):
part_name = self.ProjectParameters["structure_solver_settings"][
"solver_settings"]["processes_sub_model_part_list"][
i].GetString()
SolidModel.update({
part_name:
self.structure_main_model_part.GetSubModelPart(part_name)
})
## Processes construction
import process_factory
# "list_of_processes" contains all the processes already constructed (boundary conditions, initial conditions and gravity)
# Note that the conditions are firstly constructed. Otherwise, they may overwrite the BCs information.
# FLUID DOMAIN PROCESSES
self.list_of_processes = process_factory.KratosProcessFactory(
FluidModel).ConstructListOfProcesses(
self.ProjectParameters["fluid_solver_settings"]
["initial_conditions_process_list"])
self.list_of_processes += process_factory.KratosProcessFactory(
FluidModel).ConstructListOfProcesses(
self.ProjectParameters["fluid_solver_settings"]
["boundary_conditions_process_list"])
self.list_of_processes += process_factory.KratosProcessFactory(
FluidModel).ConstructListOfProcesses(
self.ProjectParameters["fluid_solver_settings"]["gravity"])
# SOLID DOMAIN PROCESSES
self.list_of_processes += process_factory.KratosProcessFactory(
SolidModel).ConstructListOfProcesses(
self.ProjectParameters["structure_solver_settings"]
["constraints_process_list"])
self.list_of_processes += process_factory.KratosProcessFactory(
SolidModel).ConstructListOfProcesses(
self.ProjectParameters["structure_solver_settings"]
["loads_process_list"])
## Processes initialization
for process in self.list_of_processes:
process.ExecuteInitialize()
# Solver initialization moved after the processes initialization, otherwise the flag INTERFACE is not set
self.solver.Initialize()
def Solve(self):
## Time settings
end_time = self.ProjectParameters["fluid_solver_settings"][
"problem_data"]["end_time"].GetDouble()
time = 0.0
step = 0
out = 0.0
if (self.output_post == True):
self.gid_output_structure.ExecuteBeforeSolutionLoop()
self.gid_output_fluid.ExecuteBeforeSolutionLoop()
for process in self.list_of_processes:
process.ExecuteBeforeSolutionLoop()
while (time <= end_time):
Dt = (self.solver).ComputeDeltaTime()
time = time + Dt
step = step + 1
self.solver.SetTimeStep(step)
self.structure_main_model_part.CloneTimeStep(time)
self.fluid_main_model_part.CloneTimeStep(time)
for process in self.list_of_processes:
process.ExecuteInitializeSolutionStep()
if (self.output_post == True):
self.gid_output_structure.ExecuteInitializeSolutionStep()
self.gid_output_fluid.ExecuteInitializeSolutionStep()
(self.solver).Solve()
for process in self.list_of_processes:
process.ExecuteFinalizeSolutionStep()
if (self.output_post == True):
self.gid_output_structure.ExecuteFinalizeSolutionStep()
self.gid_output_fluid.ExecuteFinalizeSolutionStep()
#TODO: decide if it shall be done only when output is processed or not
for process in self.list_of_processes:
process.ExecuteBeforeOutputStep()
if (self.output_post == True):
if self.gid_output_structure.IsOutputStep():
self.gid_output_structure.PrintOutput()
if self.gid_output_fluid.IsOutputStep():
self.gid_output_fluid.PrintOutput()
for process in self.list_of_processes:
process.ExecuteAfterOutputStep()
out = out + Dt
for process in self.list_of_processes:
process.ExecuteFinalize()
if (self.output_post == True):
self.gid_output_structure.ExecuteFinalize()
self.gid_output_fluid.ExecuteFinalize()
class TestMortarMapperCore(KratosUnittest.TestCase):
def setUp(self):
pass
def __base_test_mapping(self, input_filename, num_nodes, master_num_nodes,
pure_implicit, inverted):
KratosMultiphysics.Logger.GetDefaultOutput().SetSeverity(
KratosMultiphysics.Logger.Severity.WARNING)
self.StructureModel = KratosMultiphysics.Model()
self.main_model_part = self.StructureModel.CreateModelPart(
"Structure", 2)
self.main_model_part.AddNodalSolutionStepVariable(
KratosMultiphysics.DISPLACEMENT)
self.main_model_part.AddNodalSolutionStepVariable(
KratosMultiphysics.TEMPERATURE)
self.main_model_part.AddNodalSolutionStepVariable(
KratosMultiphysics.NORMAL)
self.main_model_part.CloneTimeStep(1.01)
KratosMultiphysics.ModelPartIO(input_filename).ReadModelPart(
self.main_model_part)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_X, self.main_model_part)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_Y, self.main_model_part)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_Z, self.main_model_part)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.TEMPERATURE, self.main_model_part)
if (inverted is True):
self.model_part_slave = self.main_model_part.GetSubModelPart(
"Parts_Parts_Auto2")
self.model_part_master = self.main_model_part.GetSubModelPart(
"Parts_Parts_Auto1")
else:
self.model_part_slave = self.main_model_part.GetSubModelPart(
"Parts_Parts_Auto1")
self.model_part_master = self.main_model_part.GetSubModelPart(
"Parts_Parts_Auto2")
for node in self.model_part_master.Nodes:
x = node.X
y = node.Y
z = node.Z
node.SetSolutionStepValue(KratosMultiphysics.TEMPERATURE, z)
node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT_X, x)
node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT_Y, y)
node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT_Z, z)
del (node)
map_parameters = KratosMultiphysics.Parameters("""
{
"echo_level" : 0,
"absolute_convergence_tolerance" : 1.0e-9,
"relative_convergence_tolerance" : 1.0e-4,
"max_number_iterations" : 10,
"integration_order" : 2
}
""")
if (pure_implicit == True):
#linear_solver = ExternalSolversApplication.SuperLUSolver()
linear_solver = KratosMultiphysics.SkylineLUFactorizationSolver()
if (num_nodes == 3):
if (master_num_nodes == 3):
self.mortar_mapping_double = KratosMultiphysics.SimpleMortarMapperProcess3D3NDouble(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.TEMPERATURE, map_parameters,
linear_solver)
self.mortar_mapping_vector = KratosMultiphysics.SimpleMortarMapperProcess3D3NVector(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.DISPLACEMENT, map_parameters,
linear_solver)
else:
self.mortar_mapping_double = KratosMultiphysics.SimpleMortarMapperProcess3D3N4NDouble(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.TEMPERATURE, map_parameters,
linear_solver)
self.mortar_mapping_vector = KratosMultiphysics.SimpleMortarMapperProcess3D3N4NVector(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.DISPLACEMENT, map_parameters,
linear_solver)
else:
if (master_num_nodes == 4):
self.mortar_mapping_double = KratosMultiphysics.SimpleMortarMapperProcess3D4NDouble(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.TEMPERATURE, map_parameters,
linear_solver)
self.mortar_mapping_vector = KratosMultiphysics.SimpleMortarMapperProcess3D4NVector(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.DISPLACEMENT, map_parameters,
linear_solver)
else:
self.mortar_mapping_double = KratosMultiphysics.SimpleMortarMapperProcess3D4N3NDouble(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.TEMPERATURE, map_parameters,
linear_solver)
self.mortar_mapping_vector = KratosMultiphysics.SimpleMortarMapperProcess3D4N3NVector(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.DISPLACEMENT, map_parameters,
linear_solver)
else:
if (num_nodes == 3):
if (master_num_nodes == 3):
self.mortar_mapping_double = KratosMultiphysics.SimpleMortarMapperProcess3D3NDouble(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.TEMPERATURE, map_parameters)
self.mortar_mapping_vector = KratosMultiphysics.SimpleMortarMapperProcess3D3NVector(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.DISPLACEMENT, map_parameters)
else:
self.mortar_mapping_double = KratosMultiphysics.SimpleMortarMapperProcess3D3N4NDouble(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.TEMPERATURE, map_parameters)
self.mortar_mapping_vector = KratosMultiphysics.SimpleMortarMapperProcess3D3N4NVector(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.DISPLACEMENT, map_parameters)
else:
if (master_num_nodes == 4):
self.mortar_mapping_double = KratosMultiphysics.SimpleMortarMapperProcess3D4NDouble(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.TEMPERATURE, map_parameters)
self.mortar_mapping_vector = KratosMultiphysics.SimpleMortarMapperProcess3D4NVector(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.DISPLACEMENT, map_parameters)
else:
self.mortar_mapping_double = KratosMultiphysics.SimpleMortarMapperProcess3D4N3NDouble(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.TEMPERATURE, map_parameters)
self.mortar_mapping_vector = KratosMultiphysics.SimpleMortarMapperProcess3D4N3NVector(
self.model_part_master, self.model_part_slave,
KratosMultiphysics.DISPLACEMENT, map_parameters)
def _mapper_tests(self,
input_filename,
num_nodes,
master_num_nodes,
pure_implicit=False,
inverted=False):
self.__base_test_mapping(input_filename, num_nodes, master_num_nodes,
pure_implicit, inverted)
self.mortar_mapping_double.Execute()
self.mortar_mapping_vector.Execute()
# Debug postprocess file
#self.__post_process()
import from_json_check_result_process
check_parameters = KratosMultiphysics.Parameters("""
{
"check_variables" : ["TEMPERATURE","DISPLACEMENT"],
"input_file_name" : "",
"model_part_name" : "Structure",
"sub_model_part_name" : "Parts_Parts_Auto1"
}
""")
if (inverted is True):
check_parameters["input_file_name"].SetString(input_filename +
"_inverted.json")
else:
check_parameters["input_file_name"].SetString(input_filename +
".json")
check = from_json_check_result_process.FromJsonCheckResultProcess(
self.StructureModel, check_parameters)
check.ExecuteInitialize()
check.ExecuteBeforeSolutionLoop()
check.ExecuteFinalizeSolutionStep()
## The following is used to create the solution database
#import json_output_process
#out_parameters = KratosMultiphysics.Parameters("""
#{
#"output_variables" : ["TEMPERATURE","DISPLACEMENT"],
#"output_file_name" : "",
#"model_part_name" : "Structure",
#"sub_model_part_name" : "Parts_Parts_Auto1"
#}
#""")
#if (inverted is True):
#out_parameters["output_file_name"].SetString(input_filename+"_inverted.json")
#else:
#out_parameters["output_file_name"].SetString(input_filename+".json")
#out = json_output_process.JsonOutputProcess(self.StructureModel, out_parameters)
#out.ExecuteInitialize()
#out.ExecuteBeforeSolutionLoop()
#out.ExecuteFinalizeSolutionStep()
def test_less_basic_mortar_mapping_triangle_pure_implicit(self):
input_filename = os.path.dirname(
os.path.realpath(__file__)
) + "/mortar_mapper_python_tests/test_integration_several_triangles"
self._mapper_tests(input_filename, 3, 3, True)
def test_less_basic_mortar_mapping_triangle(self):
input_filename = os.path.dirname(
os.path.realpath(__file__)
) + "/mortar_mapper_python_tests/test_integration_several_triangles"
self._mapper_tests(input_filename, 3, 3)
def test_simple_curvature_mortar_mapping_triangle(self):
input_filename = os.path.dirname(os.path.realpath(
__file__)) + "/mortar_mapper_python_tests/test_simple_curvature"
self._mapper_tests(input_filename, 3, 3)
def test_mortar_mapping_triangle(self):
input_filename = os.path.dirname(
os.path.realpath(__file__)
) + "/mortar_mapper_python_tests/test_double_curvature_integration_triangle"
self._mapper_tests(input_filename, 3, 3)
def test_mortar_mapping_quad(self):
input_filename = os.path.dirname(
os.path.realpath(__file__)
) + "/mortar_mapper_python_tests/test_double_curvature_integration_quadrilateral"
self._mapper_tests(input_filename, 4, 4)
def test_mortar_mapping_quad_tri(self):
input_filename = os.path.dirname(
os.path.realpath(__file__)
) + "/mortar_mapper_python_tests/test_double_curvature_integration_triangle_quadrilateral"
self._mapper_tests(input_filename, 4, 3)
def test_mortar_mapping_tri_quad(self):
input_filename = os.path.dirname(
os.path.realpath(__file__)
) + "/mortar_mapper_python_tests/test_double_curvature_integration_triangle_quadrilateral"
self._mapper_tests(input_filename, 3, 4, False, True)
def __post_process(self):
from gid_output_process import GiDOutputProcess
self.gid_output = GiDOutputProcess(
self.main_model_part, "gid_output",
KratosMultiphysics.Parameters("""
{
"result_file_configuration" : {
"gidpost_flags": {
"GiDPostMode": "GiD_PostBinary",
"WriteDeformedMeshFlag": "WriteUndeformed",
"WriteConditionsFlag": "WriteConditionsOnly",
"MultiFileFlag": "SingleFile"
},
"nodal_results" : ["DISPLACEMENT","NORMAL","TEMPERATURE"],
"nodal_nonhistorical_results": ["NODAL_AREA","NODAL_MAUX","NODAL_VAUX"]
}
}
"""))
self.gid_output.ExecuteInitialize()
self.gid_output.ExecuteBeforeSolutionLoop()
self.gid_output.ExecuteInitializeSolutionStep()
self.gid_output.PrintOutput()
self.gid_output.ExecuteFinalizeSolutionStep()
self.gid_output.ExecuteFinalize()
def __sci_str(self, x):
from decimal import Decimal
s = 10 * Decimal(str(x))
s = ('{:.' + str(len(s.normalize().as_tuple().digits) - 1) +
'E}').format(s)
s = s.replace('E+', 'D0')
s = s.replace('E-', 'D0-')
s = s.replace('.', '')
if s.startswith('-'):
return '-.' + s[1:]
else:
return '.' + s
class TestPatchTestShellsOrthotropic(KratosUnittest.TestCase):
def setUp(self):
pass
def _add_variables(self, mp):
mp.AddNodalSolutionStepVariable(KratosMultiphysics.DISPLACEMENT)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.ROTATION)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.REACTION)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.REACTION_MOMENT)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.VOLUME_ACCELERATION)
mp.AddNodalSolutionStepVariable(
StructuralMechanicsApplication.POINT_LOAD)
def _add_dofs(self, mp):
# Adding the dofs AND their corresponding reaction!
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_X, KratosMultiphysics.REACTION_X,
mp)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_Y, KratosMultiphysics.REACTION_Y,
mp)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_Z, KratosMultiphysics.REACTION_Z,
mp)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.ROTATION_X,
KratosMultiphysics.REACTION_MOMENT_X, mp)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.ROTATION_Y,
KratosMultiphysics.REACTION_MOMENT_Y, mp)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.ROTATION_Z,
KratosMultiphysics.REACTION_MOMENT_Z, mp)
def _create_nodes(self, mp, element_name):
mp.CreateNewNode(1, -0.5, -0.45, 0.1)
mp.CreateNewNode(2, 0.7, -0.5, 0.2)
mp.CreateNewNode(3, 0.55, 0.6, 0.15)
mp.CreateNewNode(4, -0.48, 0.65, 0.0)
mp.CreateNewNode(5, 0.02, -0.01, -0.15)
if element_name.endswith(
"4N"): # create aditional nodes needed for quad-setup
mp.CreateNewNode(6, -0.03, -0.5, 0.0)
mp.CreateNewNode(7, 0.51, 0.02, 0.03)
mp.CreateNewNode(8, -0.01, 0.52, -0.05)
mp.CreateNewNode(9, -0.49, -0.0, 0.0)
def _create_elements(self, mp, element_name):
if element_name.endswith("4N"): # Quadrilaterals
mp.CreateNewElement(element_name, 1, [1, 6, 5, 9],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 2, [6, 2, 7, 5],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 3, [5, 7, 3, 8],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 4, [9, 5, 8, 4],
mp.GetProperties()[1])
else: # Triangles
mp.CreateNewElement(element_name, 1, [1, 2, 5],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 2, [2, 3, 5],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 3, [3, 4, 5],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 4, [4, 1, 5],
mp.GetProperties()[1])
def _apply_dirichlet_BCs(self, mp):
KratosMultiphysics.VariableUtils().ApplyFixity(
KratosMultiphysics.DISPLACEMENT_X, True, mp.Nodes)
KratosMultiphysics.VariableUtils().ApplyFixity(
KratosMultiphysics.DISPLACEMENT_Y, True, mp.Nodes)
KratosMultiphysics.VariableUtils().ApplyFixity(
KratosMultiphysics.DISPLACEMENT_Z, True, mp.Nodes)
KratosMultiphysics.VariableUtils().ApplyFixity(
KratosMultiphysics.ROTATION_X, True, mp.Nodes)
KratosMultiphysics.VariableUtils().ApplyFixity(
KratosMultiphysics.ROTATION_Y, True, mp.Nodes)
KratosMultiphysics.VariableUtils().ApplyFixity(
KratosMultiphysics.ROTATION_Z, True, mp.Nodes)
def _apply_neumann_BCs(self, mp):
for node in mp.Nodes:
node.SetSolutionStepValue(
StructuralMechanicsApplication.POINT_LOAD, 0, [6.1, -5.5, 8.9])
mp.CreateNewCondition("PointLoadCondition3D1N", 1, [node.Id],
mp.GetProperties()[1])
def _apply_material_properties(self, mp):
self.skipTestIfApplicationsNotAvailable("ConstitutiveLawsApplication")
#define properties
orthotropic_props = Matrix(4, 16)
# Orthotropic mechanical moduli
orthotropic_props[0, 0] = 0.5 #lamina thickness
orthotropic_props[0, 1] = 0.0 #lamina rotation (deg)
orthotropic_props[0, 2] = 7850 #density
orthotropic_props[0, 3] = 7500 #E1
orthotropic_props[0, 4] = 2000 #E2
orthotropic_props[0, 5] = 0.25 #nu_12
orthotropic_props[0, 6] = 1250 #G_12
orthotropic_props[0, 7] = 625 #G_13
orthotropic_props[0, 8] = 625 #G_23
# Orthotropic mechanical strengths. (T)ensile, (C)ompression, (S)hear
# along 1, 2, 3 lamina directions
orthotropic_props[0, 9] = 800 #T1
orthotropic_props[0, 10] = 500 #C1
orthotropic_props[0, 11] = 40 #T2
orthotropic_props[0, 12] = 300 #C2
orthotropic_props[0, 13] = 60 #S12
orthotropic_props[0, 14] = 60 #S13
orthotropic_props[0, 15] = 60 #S23
for row in range(1, 4):
for col in range(16):
orthotropic_props[row, col] = orthotropic_props[0, col]
orthotropic_props[1, 1] = 90
orthotropic_props[2, 1] = 90
mp.GetProperties()[1].SetValue(
KratosMultiphysics.StructuralMechanicsApplication.
SHELL_ORTHOTROPIC_LAYERS, orthotropic_props)
g = [0, 0, 0]
mp.GetProperties()[1].SetValue(KratosMultiphysics.VOLUME_ACCELERATION,
g)
cl = ConstitutiveLawsApplication.LinearElasticOrthotropic2DLaw()
mp.GetProperties()[1].SetValue(KratosMultiphysics.CONSTITUTIVE_LAW, cl)
def _solve(self, mp):
#define a minimal newton raphson solver
linear_solver = KratosMultiphysics.SkylineLUFactorizationSolver()
builder_and_solver = KratosMultiphysics.ResidualBasedBlockBuilderAndSolver(
linear_solver)
scheme = KratosMultiphysics.ResidualBasedIncrementalUpdateStaticScheme(
)
convergence_criterion = KratosMultiphysics.ResidualCriteria(
1e-14, 1e-20)
convergence_criterion.SetEchoLevel(0)
max_iters = 20
compute_reactions = True
reform_step_dofs = True
calculate_norm_dx = False
move_mesh_flag = True
strategy = KratosMultiphysics.ResidualBasedNewtonRaphsonStrategy(
mp, scheme, convergence_criterion, builder_and_solver, max_iters,
compute_reactions, reform_step_dofs, move_mesh_flag)
strategy.SetEchoLevel(0)
strategy.Check()
strategy.Solve()
def _check_results(self, node, displacement_results, rotation_results):
##check that the results are exact on the node
disp = node.GetSolutionStepValue(KratosMultiphysics.DISPLACEMENT)
self.assertAlmostEqual(disp[0], displacement_results[0], 10)
self.assertAlmostEqual(disp[1], displacement_results[1], 10)
self.assertAlmostEqual(disp[2], displacement_results[2], 10)
rot = node.GetSolutionStepValue(KratosMultiphysics.ROTATION)
self.assertAlmostEqual(rot[0], rotation_results[0], 10)
self.assertAlmostEqual(rot[1], rotation_results[1], 10)
self.assertAlmostEqual(rot[2], rotation_results[2], 10)
def _check_results_stress(self, element, stress_variable,
reference_stress_results, processInfo):
##check that the results are exact on the first gauss point
##only upper triangle of stresses are checked due to symmetry
stress = element.CalculateOnIntegrationPoints(stress_variable,
processInfo)[0]
self.assertAlmostEqual(stress[0, 0], reference_stress_results[0], 10)
self.assertAlmostEqual(stress[0, 1], reference_stress_results[1], 10)
self.assertAlmostEqual(stress[0, 2], reference_stress_results[2], 10)
self.assertAlmostEqual(stress[1, 1], reference_stress_results[3], 10)
self.assertAlmostEqual(stress[1, 2], reference_stress_results[4], 10)
self.assertAlmostEqual(stress[2, 2], reference_stress_results[5], 10)
def execute_shell_test(self, current_model, element_name,
displacement_results, rotation_results,
shell_stress_top_surface_results,
shell_stress_bottom_surface_results, tsai_wu_result,
do_post_processing):
mp = current_model.CreateModelPart("solid_part")
mp.SetBufferSize(2)
self._add_variables(mp)
self._apply_material_properties(mp)
self._create_nodes(mp, element_name)
self._add_dofs(mp)
self._create_elements(mp, element_name)
#create a submodelpart for dirichlet boundary conditions
bcs_dirichlet = mp.CreateSubModelPart("BoundaryCondtionsDirichlet")
bcs_dirichlet.AddNodes([1, 2, 4])
#create a submodelpart for neumann boundary conditions
bcs_neumann = mp.CreateSubModelPart("BoundaryCondtionsNeumann")
bcs_neumann.AddNodes([3])
self._apply_dirichlet_BCs(bcs_dirichlet)
self._apply_neumann_BCs(bcs_neumann)
self._solve(mp)
# Check displacements
self._check_results(mp.Nodes[3], displacement_results,
rotation_results)
# Check stresses at each surface
self._check_results_stress(
mp.Elements[1], StructuralMechanicsApplication.
SHELL_ORTHOTROPIC_STRESS_TOP_SURFACE,
shell_stress_top_surface_results, mp.ProcessInfo)
self._check_results_stress(
mp.Elements[1], StructuralMechanicsApplication.
SHELL_ORTHOTROPIC_STRESS_BOTTOM_SURFACE,
shell_stress_bottom_surface_results, mp.ProcessInfo)
# Check results of doubles on 2nd element @ Gauss Point [0] only
self.assertAlmostEqual(
mp.Elements[1].CalculateOnIntegrationPoints(
StructuralMechanicsApplication.TSAI_WU_RESERVE_FACTOR,
mp.ProcessInfo)[0], tsai_wu_result, 9)
if do_post_processing:
self.__post_process(mp)
def test_thin_shell_triangle(self):
element_name = "ShellThinElementCorotational3D3N"
displacement_results = [
0.0028456068244, -0.0021804536526, 0.0014855251225
]
rotation_results = [0.0028315743508, -0.000450044246, -0.0055701845132]
shell_stress_top_surface_results = [
0.9088110489672, -0.0570461205561, 0.0, 1.7678124328652, 0.0, 0.0
]
shell_stress_bottom_surface_results = [
-0.4936295259123, 0.2914348407351, 0.0, -0.5256560385672, 0.0, 0.0
]
tsai_wu_result = 39.6023549141987
current_model = KratosMultiphysics.Model()
self.execute_shell_test(current_model, element_name,
displacement_results, rotation_results,
shell_stress_top_surface_results,
shell_stress_bottom_surface_results,
tsai_wu_result,
False) # Do PostProcessing for GiD?
def test_thick_shell_triangle(self):
element_name = "ShellThickElementCorotational3D3N"
displacement_results = [
0.0004043490308, -0.0016074440019, 0.0092911008314
]
rotation_results = [
0.0021176894774, -0.0005954288823, -0.0015930914838
]
shell_stress_top_surface_results = [
3.4555559859345, 3.6328430864296, 0.2347447591457, 0.1945591765769,
-1.5033148859134, 0.0
]
shell_stress_bottom_surface_results = [
-0.5442976284974, -0.1011836349433, 0.2347447591457,
-2.8139010064313, -1.5033148859134, 0.0
]
tsai_wu_result = 15.0065495746848
current_model = KratosMultiphysics.Model()
self.execute_shell_test(current_model, element_name,
displacement_results, rotation_results,
shell_stress_top_surface_results,
shell_stress_bottom_surface_results,
tsai_wu_result,
False) # Do PostProcessing for GiD?
def test_thin_shell_quadrilateral(self):
element_name = "ShellThinElementCorotational3D4N"
displacement_results = [
0.0225804891311, -0.0233155244988, 0.0048050841112
]
rotation_results = [0.0248341724156, 0.0105468617083, -0.0691658930497]
shell_stress_top_surface_results = [
0.284184788186, -12.2844786822622, 0.0, 4.3796427631839, 0.0, 0.0
]
shell_stress_bottom_surface_results = [
10.340621141106, 5.6934270260323, 0.0, -2.973608875272, 0.0, 0.0
]
tsai_wu_result = 3.828332205752
current_model = KratosMultiphysics.Model()
self.execute_shell_test(current_model, element_name,
displacement_results, rotation_results,
shell_stress_top_surface_results,
shell_stress_bottom_surface_results,
tsai_wu_result,
False) # Do PostProcessing for GiD?
def test_thick_shell_quadrilateral(self):
element_name = "ShellThickElementCorotational3D4N"
displacement_results = [
0.0035689894826, -0.0094851917758, 0.0191734998621
]
rotation_results = [0.009933211939, 0.0006068078079, -0.0174332051568]
shell_stress_top_surface_results = [
-3.9178477532111, -4.1074850572552, -2.4426862077188,
10.3723187292559, 1.6354826554283, 0.0
]
shell_stress_bottom_surface_results = [
5.2113212123242, -0.2324161069908, -2.4426862077188,
-11.6664322521041, 1.6354826554283, 0.0
]
tsai_wu_result = 3.4966651118454
current_model = KratosMultiphysics.Model()
self.execute_shell_test(current_model, element_name,
displacement_results, rotation_results,
shell_stress_top_surface_results,
shell_stress_bottom_surface_results,
tsai_wu_result,
False) # Do PostProcessing for GiD?
def __post_process(self, main_model_part):
from gid_output_process import GiDOutputProcess
self.gid_output = GiDOutputProcess(
main_model_part, "gid_output",
KratosMultiphysics.Parameters("""
{
"result_file_configuration" : {
"gidpost_flags": {
"GiDPostMode": "GiD_PostBinary",
"WriteDeformedMeshFlag": "WriteUndeformed",
"WriteConditionsFlag": "WriteConditions",
"MultiFileFlag": "SingleFile"
},
"nodal_results" : ["DISPLACEMENT", "ROTATION", "POINT_LOAD"],
"gauss_point_results" : ["GREEN_LAGRANGE_STRAIN_TENSOR","CAUCHY_STRESS_TENSOR"]
}
}
"""))
self.gid_output.ExecuteInitialize()
self.gid_output.ExecuteBeforeSolutionLoop()
self.gid_output.ExecuteInitializeSolutionStep()
self.gid_output.PrintOutput()
self.gid_output.ExecuteFinalizeSolutionStep()
self.gid_output.ExecuteFinalize()
class KratosExecuteTwoFacesMapperTest:
def __init__(self, ProjectParameters):
# Json format solvers settings
ProjectParametersFluid = ProjectParameters["fluid_solver_settings"]
ProjectParametersSolid = ProjectParameters["structure_solver_settings"]
# Defining a model part for the fluid and one for the structure
self.structure_main_model_part = ModelPart("structure_part")
self.fluid_main_model_part = ModelPart("fluid_part")
# Set the domain size (2D or 3D test)
self.structure_main_model_part.ProcessInfo.SetValue(
DOMAIN_SIZE,
ProjectParametersFluid["problem_data"]["domain_size"].GetInt())
self.fluid_main_model_part.ProcessInfo.SetValue(
DOMAIN_SIZE,
ProjectParametersSolid["problem_data"]["domain_size"].GetInt())
# Set the fluid and solid models
FluidModel = {
ProjectParametersFluid["problem_data"]["model_part_name"].GetString(
):
self.structure_main_model_part
}
SolidModel = {
ProjectParametersSolid["problem_data"]["model_part_name"].GetString(
):
self.fluid_main_model_part
}
# Fluid model part variables addition
self.fluid_main_model_part.AddNodalSolutionStepVariable(VELOCITY)
self.fluid_main_model_part.AddNodalSolutionStepVariable(PRESSURE)
self.fluid_main_model_part.AddNodalSolutionStepVariable(REACTION)
# Structure model part variables addition
self.structure_main_model_part.AddNodalSolutionStepVariable(VELOCITY)
self.structure_main_model_part.AddNodalSolutionStepVariable(PRESSURE)
self.structure_main_model_part.AddNodalSolutionStepVariable(
POSITIVE_FACE_PRESSURE)
self.structure_main_model_part.AddNodalSolutionStepVariable(
NEGATIVE_FACE_PRESSURE)
self.structure_main_model_part.AddNodalSolutionStepVariable(POINT_LOAD)
# Mapper variables addition
NonConformant_OneSideMap.AddVariables(self.fluid_main_model_part,
self.structure_main_model_part)
# Fluid domain model reading
ModelPartIO(
ProjectParametersFluid["solver_settings"]["model_import_settings"]
["input_filename"].GetString()).ReadModelPart(
self.fluid_main_model_part)
prepare_model_part_settings_fluid = Parameters("{}")
prepare_model_part_settings_fluid.AddValue(
"volume_model_part_name", ProjectParametersFluid["solver_settings"]
["volume_model_part_name"])
prepare_model_part_settings_fluid.AddValue(
"skin_parts",
ProjectParametersFluid["solver_settings"]["skin_parts"])
import check_and_prepare_model_process_fluid
check_and_prepare_model_process_fluid.CheckAndPrepareModelProcess(
self.fluid_main_model_part,
prepare_model_part_settings_fluid).Execute()
# Solid domain model reading
computing_model_part_name = "computing_domain"
ModelPartIO(
ProjectParametersSolid["solver_settings"]["model_import_settings"]
["input_filename"].GetString()).ReadModelPart(
self.structure_main_model_part)
prepare_model_part_settings_structure = Parameters("{}")
prepare_model_part_settings_structure.AddEmptyValue(
"computing_model_part_name").SetString(computing_model_part_name)
prepare_model_part_settings_structure.AddValue(
"problem_domain_sub_model_part_list",
ProjectParametersSolid["solver_settings"]
["problem_domain_sub_model_part_list"])
prepare_model_part_settings_structure.AddValue(
"processes_sub_model_part_list",
ProjectParametersSolid["solver_settings"]
["processes_sub_model_part_list"])
import check_and_prepare_model_process_solid
check_and_prepare_model_process_solid.CheckAndPrepareModelProcess(
self.structure_main_model_part,
prepare_model_part_settings_structure).Execute()
# Get the list of the skin submodel parts where the fluid interface submodel part is stored
for i in range(ProjectParametersFluid["solver_settings"]
["skin_parts"].size()):
skin_part_name = ProjectParametersFluid["solver_settings"][
"skin_parts"][i].GetString()
FluidModel.update({
skin_part_name:
self.fluid_main_model_part.GetSubModelPart(skin_part_name)
})
# Get the list of the submodel parts where the structure interface is stored
for i in range(ProjectParametersSolid["solver_settings"]
["processes_sub_model_part_list"].size()):
part_name = ProjectParametersSolid["solver_settings"][
"processes_sub_model_part_list"][i].GetString()
SolidModel.update({
part_name:
self.structure_main_model_part.GetSubModelPart(part_name)
})
# Construct processes
self.list_of_processes = process_factory.KratosProcessFactory(
FluidModel).ConstructListOfProcesses(
ProjectParametersFluid["boundary_conditions_process_list"])
self.list_of_processes += process_factory.KratosProcessFactory(
SolidModel).ConstructListOfProcesses(
ProjectParametersSolid["constraints_process_list"])
for process in self.list_of_processes:
process.ExecuteInitialize()
# Mapper construction
search_radius_factor = 2.0
mapper_max_iterations = 200
mapper_tolerance = 1e-12
self.mapper = NonConformant_OneSideMap.NonConformantTwoFaces_OneSideMap(
self.fluid_main_model_part.GetSubModelPart("Fluid_interface_pos"),
self.fluid_main_model_part.GetSubModelPart("Fluid_interface_neg"),
self.structure_main_model_part.GetSubModelPart(
"Structure_interface"), search_radius_factor,
mapper_max_iterations, mapper_tolerance)
# Output settings
self.output_post = False # Set this variable to True if it is need to print the results for debugging purposes
self.problem_path = os.getcwd()
if (self.output_post == True):
from gid_output_process import GiDOutputProcess
self.gid_output_structure = GiDOutputProcess(
self.structure_main_model_part,
ProjectParametersSolid["problem_data"]
["problem_name"].GetString() + "_structure",
ProjectParametersSolid["output_configuration"])
self.gid_output_fluid = GiDOutputProcess(
self.fluid_main_model_part,
ProjectParametersFluid["problem_data"]
["problem_name"].GetString() + "_fluid",
ProjectParametersFluid["output_configuration"])
self.gid_output_structure.ExecuteInitialize()
self.gid_output_fluid.ExecuteInitialize()
def Solve(self):
for process in self.list_of_processes:
process.ExecuteBeforeSolutionLoop()
if (self.output_post == True):
self.gid_output_structure.ExecuteBeforeSolutionLoop()
self.gid_output_fluid.ExecuteBeforeSolutionLoop()
self.structure_main_model_part.ProcessInfo[TIME_STEPS] = 1
self.structure_main_model_part.CloneTimeStep(1.0)
self.fluid_main_model_part.ProcessInfo[TIME_STEPS] = 1
self.fluid_main_model_part.CloneTimeStep(1.0)
for process in self.list_of_processes:
process.ExecuteInitializeSolutionStep()
if (self.output_post == True):
self.gid_output_structure.ExecuteInitializeSolutionStep()
self.gid_output_fluid.ExecuteInitializeSolutionStep()
# Solve: Information transfer
self.mapper.PositiveFluidToStructure_ScalarMap(PRESSURE,
POSITIVE_FACE_PRESSURE,
True)
self.mapper.NegativeFluidToStructure_ScalarMap(PRESSURE,
NEGATIVE_FACE_PRESSURE,
True)
self.mapper.StructureToPositiveFluid_VectorMap(VELOCITY, VELOCITY,
True, False)
self.mapper.StructureToNegativeFluid_VectorMap(VELOCITY, VELOCITY,
True, False)
if (self.output_post == True):
self.gid_output_structure.ExecuteFinalizeSolutionStep()
self.gid_output_fluid.ExecuteFinalizeSolutionStep()
for process in self.list_of_processes:
process.ExecuteFinalizeSolutionStep()
for process in self.list_of_processes:
process.ExecuteBeforeOutputStep()
for process in self.list_of_processes:
process.ExecuteAfterOutputStep()
if (self.output_post == True):
self.gid_output_structure.PrintOutput()
self.gid_output_fluid.PrintOutput()
if (self.output_post == True):
self.gid_output_structure.ExecuteFinalize()
self.gid_output_fluid.ExecuteFinalize()
for process in self.list_of_processes:
process.ExecuteFinalize()
class TestQuadraticElements(KratosUnittest.TestCase):
def setUp(self):
pass
def _add_variables(self, mp):
mp.AddNodalSolutionStepVariable(KratosMultiphysics.DISPLACEMENT)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.REACTION)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.VOLUME_ACCELERATION)
def _apply_BCs(self, mp):
for node in mp.Nodes:
node.Fix(KratosMultiphysics.DISPLACEMENT_X)
node.Fix(KratosMultiphysics.DISPLACEMENT_Y)
node.Fix(KratosMultiphysics.DISPLACEMENT_Z)
for node in mp.Nodes:
u = KratosMultiphysics.Vector(3)
u[0] = node.X0**2
u[1] = node.Y0**2
u[2] = node.Z0**2
node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT, 0, u)
def _apply_material_properties(self, mp, dim):
#define properties
mp.GetProperties()[0].SetValue(KratosMultiphysics.YOUNG_MODULUS, 210e9)
mp.GetProperties()[0].SetValue(KratosMultiphysics.POISSON_RATIO, 0.3)
mp.GetProperties()[0].SetValue(KratosMultiphysics.THICKNESS, 1.0)
mp.GetProperties()[0].SetValue(KratosMultiphysics.DENSITY, 1.0)
g = [0, 0, 0]
mp.GetProperties()[0].SetValue(KratosMultiphysics.VOLUME_ACCELERATION,
g)
if (dim == 2):
cl = StructuralMechanicsApplication.LinearElasticPlaneStress2DLaw()
else:
cl = StructuralMechanicsApplication.LinearElastic3DLaw()
mp.GetProperties()[0].SetValue(KratosMultiphysics.CONSTITUTIVE_LAW, cl)
def _solve(self, mp):
#define a minimal newton raphson solver
linear_solver = KratosMultiphysics.SkylineLUFactorizationSolver()
builder_and_solver = KratosMultiphysics.ResidualBasedBlockBuilderAndSolver(
linear_solver)
scheme = KratosMultiphysics.ResidualBasedIncrementalUpdateStaticScheme(
)
convergence_criterion = KratosMultiphysics.ResidualCriteria(
1e-14, 1e-20)
max_iters = 20
compute_reactions = True
reform_step_dofs = True
calculate_norm_dx = False
move_mesh_flag = True
strategy = KratosMultiphysics.ResidualBasedLinearStrategy(
mp, scheme, linear_solver, builder_and_solver, compute_reactions,
reform_step_dofs, calculate_norm_dx, move_mesh_flag)
#strategy = KratosMultiphysics.ResidualBasedNewtonRaphsonStrategy(mp,
#scheme,
#linear_solver,
#convergence_criterion,
#builder_and_solver,
#max_iters,
#compute_reactions,
#reform_step_dofs,
#move_mesh_flag)
strategy.SetEchoLevel(0)
strategy.Check()
strategy.Solve()
def _check_outputs(self, mp, dim):
for elem in mp.Elements:
strains = elem.CalculateOnIntegrationPoints(
KratosMultiphysics.GREEN_LAGRANGE_STRAIN_VECTOR,
mp.ProcessInfo)
coords = elem.CalculateOnIntegrationPoints(
KratosMultiphysics.INTEGRATION_COORDINATES, mp.ProcessInfo)
for strain, coord in zip(strains, coords):
for i in range(2):
self.assertAlmostEqual(
(coord[i] - 0.5 * strain[i]) / coord[i], 0.0, 1)
def test_Quad8(self):
dim = 2
mp = KratosMultiphysics.ModelPart("solid_part")
self._add_variables(mp)
#KratosMultiphysics.ModelPartIO("quadratic_test/static_quadratic_quad_test").ReadModelPart(mp)
self._apply_material_properties(mp, dim)
# Create nodes
mp.CreateNewNode(1, 0.0000000000, 2.0000000000, 0.0000000000)
mp.CreateNewNode(2, 0.0000000000, 1.7500000000, 0.0000000000)
mp.CreateNewNode(3, 0.2500000000, 1.9375000000, 0.0000000000)
mp.CreateNewNode(4, 0.0000000000, 1.5000000000, 0.0000000000)
mp.CreateNewNode(5, 0.5000000000, 1.8750000000, 0.0000000000)
mp.CreateNewNode(6, 0.2500000000, 1.4610595703, 0.0000000000)
mp.CreateNewNode(7, 0.5000000000, 1.6485595703, 0.0000000000)
mp.CreateNewNode(8, 0.0000000000, 1.2500000000, 0.0000000000)
mp.CreateNewNode(9, 0.5000000000, 1.4287109375, 0.0000000000)
mp.CreateNewNode(10, 0.7500000000, 1.8125000000, 0.0000000000)
mp.CreateNewNode(11, 0.5000000000, 1.2132568359, 0.0000000000)
mp.CreateNewNode(12, 0.7500000000, 1.4007568359, 0.0000000000)
mp.CreateNewNode(13, 0.0000000000, 1.0000000000, 0.0000000000)
mp.CreateNewNode(14, 1.0000000000, 1.7500000000, 0.0000000000)
mp.CreateNewNode(15, 0.2500000000, 1.0000000000, 0.0000000000)
mp.CreateNewNode(16, 1.0000000000, 1.5625000000, 0.0000000000)
mp.CreateNewNode(17, 0.5000000000, 1.0000000000, 0.0000000000)
mp.CreateNewNode(18, 1.0000000000, 1.3750000000, 0.0000000000)
mp.CreateNewNode(19, 0.0000000000, 0.7500000000, 0.0000000000)
mp.CreateNewNode(20, 0.7500000000, 1.0000000000, 0.0000000000)
mp.CreateNewNode(21, 1.2500000000, 1.6875000000, 0.0000000000)
mp.CreateNewNode(22, 1.0000000000, 1.1875000000, 0.0000000000)
mp.CreateNewNode(23, 0.5000000000, 0.7867431641, 0.0000000000)
mp.CreateNewNode(24, 1.2500000000, 1.3492431641, 0.0000000000)
mp.CreateNewNode(25, 1.0000000000, 1.0000000000, 0.0000000000)
mp.CreateNewNode(26, 0.2500000000, 0.5389404297, 0.0000000000)
mp.CreateNewNode(27, 0.0000000000, 0.5000000000, 0.0000000000)
mp.CreateNewNode(28, 0.5000000000, 0.5712890625, 0.0000000000)
mp.CreateNewNode(29, 1.5000000000, 1.6250000000, 0.0000000000)
mp.CreateNewNode(30, 1.0000000000, 0.8125000000, 0.0000000000)
mp.CreateNewNode(31, 1.5000000000, 1.4764404297, 0.0000000000)
mp.CreateNewNode(32, 0.7500000000, 0.5992431641, 0.0000000000)
mp.CreateNewNode(33, 1.2500000000, 1.0000000000, 0.0000000000)
mp.CreateNewNode(34, 1.5000000000, 1.3212890625, 0.0000000000)
mp.CreateNewNode(35, 1.0000000000, 0.6250000000, 0.0000000000)
mp.CreateNewNode(36, 1.5000000000, 1.1617431641, 0.0000000000)
mp.CreateNewNode(37, 0.5000000000, 0.3514404297, 0.0000000000)
mp.CreateNewNode(38, 0.0000000000, 0.2500000000, 0.0000000000)
mp.CreateNewNode(39, 1.5000000000, 1.0000000000, 0.0000000000)
mp.CreateNewNode(40, 1.7500000000, 1.5625000000, 0.0000000000)
mp.CreateNewNode(41, 1.2500000000, 0.6507568359, 0.0000000000)
mp.CreateNewNode(42, 1.0000000000, 0.4375000000, 0.0000000000)
mp.CreateNewNode(43, 1.7500000000, 1.2889404297, 0.0000000000)
mp.CreateNewNode(44, 1.5000000000, 0.8382568359, 0.0000000000)
mp.CreateNewNode(45, 0.5000000000, 0.1250000000, 0.0000000000)
mp.CreateNewNode(46, 0.2500000000, 0.0625000000, 0.0000000000)
mp.CreateNewNode(47, 0.7500000000, 0.1875000000, 0.0000000000)
mp.CreateNewNode(48, 1.5000000000, 0.6787109375, 0.0000000000)
mp.CreateNewNode(49, 0.0000000000, 0.0000000000, 0.0000000000)
mp.CreateNewNode(50, 1.0000000000, 0.2500000000, 0.0000000000)
mp.CreateNewNode(51, 1.7500000000, 1.0000000000, 0.0000000000)
mp.CreateNewNode(52, 2.0000000000, 1.5000000000, 0.0000000000)
mp.CreateNewNode(53, 2.0000000000, 1.3750000000, 0.0000000000)
mp.CreateNewNode(54, 1.2500000000, 0.3125000000, 0.0000000000)
mp.CreateNewNode(55, 1.5000000000, 0.5235595703, 0.0000000000)
mp.CreateNewNode(56, 2.0000000000, 1.2500000000, 0.0000000000)
mp.CreateNewNode(57, 1.7500000000, 0.7110595703, 0.0000000000)
mp.CreateNewNode(58, 2.0000000000, 1.1250000000, 0.0000000000)
mp.CreateNewNode(59, 1.5000000000, 0.3750000000, 0.0000000000)
mp.CreateNewNode(60, 2.0000000000, 1.0000000000, 0.0000000000)
mp.CreateNewNode(61, 2.0000000000, 0.8750000000, 0.0000000000)
mp.CreateNewNode(62, 1.7500000000, 0.4375000000, 0.0000000000)
mp.CreateNewNode(63, 2.0000000000, 0.7500000000, 0.0000000000)
mp.CreateNewNode(64, 2.0000000000, 0.6250000000, 0.0000000000)
mp.CreateNewNode(65, 2.0000000000, 0.5000000000, 0.0000000000)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_X, KratosMultiphysics.REACTION_X,
mp)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_Y, KratosMultiphysics.REACTION_Y,
mp)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_Z, KratosMultiphysics.REACTION_Z,
mp)
# Create Element
mp.CreateNewElement("SmallDisplacementElement2D8N", 1,
[45, 28, 27, 49, 37, 26, 38, 46],
mp.GetProperties()[0])
mp.CreateNewElement("SmallDisplacementElement2D8N", 2,
[50, 35, 28, 45, 42, 32, 37, 47],
mp.GetProperties()[0])
mp.CreateNewElement("SmallDisplacementElement2D8N", 3,
[59, 48, 35, 50, 55, 41, 42, 54],
mp.GetProperties()[0])
mp.CreateNewElement("SmallDisplacementElement2D8N", 4,
[65, 63, 48, 59, 64, 57, 55, 62],
mp.GetProperties()[0])
mp.CreateNewElement("SmallDisplacementElement2D8N", 5,
[28, 17, 13, 27, 23, 15, 19, 26],
mp.GetProperties()[0])
mp.CreateNewElement("SmallDisplacementElement2D8N", 6,
[35, 25, 17, 28, 30, 20, 23, 32],
mp.GetProperties()[0])
mp.CreateNewElement("SmallDisplacementElement2D8N", 7,
[48, 39, 25, 35, 44, 33, 30, 41],
mp.GetProperties()[0])
mp.CreateNewElement("SmallDisplacementElement2D8N", 8,
[63, 60, 39, 48, 61, 51, 44, 57],
mp.GetProperties()[0])
mp.CreateNewElement("SmallDisplacementElement2D8N", 9,
[17, 9, 4, 13, 11, 6, 8, 15],
mp.GetProperties()[0])
mp.CreateNewElement("SmallDisplacementElement2D8N", 10,
[25, 18, 9, 17, 22, 12, 11, 20],
mp.GetProperties()[0])
mp.CreateNewElement("SmallDisplacementElement2D8N", 11,
[39, 34, 18, 25, 36, 24, 22, 33],
mp.GetProperties()[0])
mp.CreateNewElement("SmallDisplacementElement2D8N", 12,
[60, 56, 34, 39, 58, 43, 36, 51],
mp.GetProperties()[0])
mp.CreateNewElement("SmallDisplacementElement2D8N", 13,
[9, 5, 1, 4, 7, 3, 2, 6],
mp.GetProperties()[0])
mp.CreateNewElement("SmallDisplacementElement2D8N", 14,
[18, 14, 5, 9, 16, 10, 7, 12],
mp.GetProperties()[0])
mp.CreateNewElement("SmallDisplacementElement2D8N", 15,
[34, 29, 14, 18, 31, 21, 16, 24],
mp.GetProperties()[0])
mp.CreateNewElement("SmallDisplacementElement2D8N", 16,
[56, 52, 29, 34, 53, 40, 31, 43],
mp.GetProperties()[0])
self._apply_BCs(mp)
self._solve(mp)
self._check_outputs(mp, dim)
#self.__post_process(mp)
def __post_process(self, main_model_part):
from gid_output_process import GiDOutputProcess
self.gid_output = GiDOutputProcess(
main_model_part, "gid_output",
KratosMultiphysics.Parameters("""
{
"result_file_configuration" : {
"gidpost_flags": {
"GiDPostMode": "GiD_PostBinary",
"WriteDeformedMeshFlag": "WriteUndeformed",
"WriteConditionsFlag": "WriteConditions",
"MultiFileFlag": "SingleFile"
},
"nodal_results" : ["DISPLACEMENT"],
"gauss_point_results" : ["GREEN_LAGRANGE_STRAIN_TENSOR","CAUCHY_STRESS_TENSOR"]
}
}
"""))
self.gid_output.ExecuteInitialize()
self.gid_output.ExecuteBeforeSolutionLoop()
self.gid_output.ExecuteInitializeSolutionStep()
self.gid_output.PrintOutput()
self.gid_output.ExecuteFinalizeSolutionStep()
self.gid_output.ExecuteFinalize()
def __init__(self, ProjectParameters):
self.ProjectParameters = ProjectParameters
# To avoid many prints
echo_level = self.ProjectParameters["problem_data"][
"echo_level"].GetInt()
if (echo_level == 0):
KratosMultiphysics.Logger.GetDefaultOutput().SetSeverity(
KratosMultiphysics.Logger.Severity.WARNING)
self.model = KratosMultiphysics.Model()
self.main_model_part = KratosMultiphysics.ModelPart(
self.ProjectParameters["problem_data"]
["model_part_name"].GetString())
self.main_model_part.ProcessInfo.SetValue(
KratosMultiphysics.DOMAIN_SIZE,
self.ProjectParameters["problem_data"]["domain_size"].GetInt())
self.problem_type = self.ProjectParameters["problem_data"][
"problem_type"].GetString()
self.solve_problem = self.ProjectParameters["problem_data"][
"solve_problem"].GetBool()
if (self.problem_type == "fluid"
and missing_external_fluid_dependencies == False):
## Solver construction
import python_solvers_wrapper_fluid as fluid_wrapper
self.solver = fluid_wrapper.CreateSolver(self.model,
self.ProjectParameters)
elif (self.problem_type == "solid"
and missing_external_solid_dependencies == False):
self.ProjectParameters["solver_settings"].AddValue(
"model_part_name",
self.ProjectParameters["problem_data"]["model_part_name"])
self.ProjectParameters["solver_settings"].AddValue(
"domain_size",
self.ProjectParameters["problem_data"]["domain_size"])
time_stepping_params = KratosMultiphysics.Parameters("{}")
time_stepping_params.AddValue(
"time_step",
self.ProjectParameters["problem_data"]["time_step"])
self.ProjectParameters["solver_settings"].AddValue(
"time_stepping", time_stepping_params)
params = KratosMultiphysics.Parameters(
"""{"computing_model_part_name": "Structure"}""")
self.ProjectParameters["solver_settings"].AddValue(
"computing_model_part_name",
params["computing_model_part_name"])
# Construct the solver (main setting methods are located in the solver_module)
import python_solvers_wrapper_structural
self.solver = python_solvers_wrapper_structural.CreateSolver(
self.model, self.ProjectParameters)
else:
raise NameError(
'Problem type not defined or failing in the import')
# Add variables (always before importing the model part) (it must be integrated in the ImportModelPart)
# If we integrate it in the model part we cannot use combined solvers
self.solver.AddVariables()
# Read model_part (note: the buffer_size is set here) (restart can be read here)
self.solver.ImportModelPart()
self.solver.PrepareModelPart()
# Add dofs (always after importing the model part) (it must be integrated in the ImportModelPart)
# If we integrate it in the model part we cannot use combined solvers
self.solver.AddDofs()
# ### Output settings start ####
self.problem_path = os.getcwd()
self.problem_name = self.ProjectParameters["problem_data"][
"problem_name"].GetString()
# ### Output settings start ####
self.output_post = ProjectParameters.Has("output_configuration")
if (self.output_post == True):
from gid_output_process import GiDOutputProcess
output_settings = ProjectParameters["output_configuration"]
self.gid_output = GiDOutputProcess(
self.solver.GetComputingModelPart(), self.problem_name,
output_settings)
self.gid_output.ExecuteInitialize()
# Sets strategies, builders, linear solvers, schemes and solving info, and fills the buffer
self.solver.Initialize()
self.solver.SetEchoLevel(0) # Avoid to print anything
if self.problem_type == "fluid":
# Build sub_model_parts or submeshes (rearrange parts for the application of custom processes)
# #Get the list of the submodel part in the object Model
for i in range(self.ProjectParameters["solver_settings"]
["skin_parts"].size()):
skin_part_name = self.ProjectParameters["solver_settings"][
"skin_parts"][i].GetString()
self.model.update({
skin_part_name:
self.main_model_part.GetSubModelPart(skin_part_name)
})
## Get the list of the initial conditions submodel parts in the object Model
for i in range(
self.ProjectParameters["initial_conditions_process_list"].
size()):
initial_cond_part_name = self.ProjectParameters[
"initial_conditions_process_list"][i]["Parameters"][
"model_part_name"].GetString()
self.model.update({
initial_cond_part_name:
self.main_model_part.GetSubModelPart(
initial_cond_part_name)
})
## Get the gravity submodel part in the object Model
for i in range(self.ProjectParameters["gravity"].size()):
gravity_part_name = self.ProjectParameters["gravity"][i][
"Parameters"]["model_part_name"].GetString()
self.model.update({
gravity_part_name:
self.main_model_part.GetSubModelPart(gravity_part_name)
})
## Remeshing processes construction
if (self.ProjectParameters.Has("initial_remeshing_process") == True):
remeshing_processes = process_factory.KratosProcessFactory(
self.model).ConstructListOfProcesses(
self.ProjectParameters["initial_remeshing_process"])
if (ProjectParameters.Has("list_other_processes") == True):
remeshing_processes += process_factory.KratosProcessFactory(
self.model).ConstructListOfProcesses(
self.ProjectParameters["list_other_processes"])
## Remeshing processes initialization
print("STARTING ADAPTATIVE LOOP")
if (self.ProjectParameters.Has("adaptative_loop") == True):
adaptative_loop = ProjectParameters["adaptative_loop"].GetInt()
else:
adaptative_loop = 1
for n in range(adaptative_loop):
print("ADAPTATIVE INTERATION: ", n + 1)
for process in reversed(remeshing_processes):
process.ExecuteInitialize()
process.ExecuteBeforeSolutionLoop()
process.ExecuteInitializeSolutionStep()
if (self.output_post == True):
output_settings = ProjectParameters[
"output_configuration"]
gid_output_initial = GiDOutputProcess(
self.solver.GetComputingModelPart(),
self.problem_name + "_" + str(n + 1),
output_settings)
gid_output_initial.ExecuteInitialize()
gid_output_initial.ExecuteBeforeSolutionLoop()
gid_output_initial.ExecuteInitializeSolutionStep()
gid_output_initial.ExecuteFinalizeSolutionStep()
gid_output_initial.PrintOutput()
gid_output_initial.ExecuteFinalize()
# Obtain the list of the processes to be applied
if self.problem_type == "fluid":
self.list_of_processes = process_factory.KratosProcessFactory(
self.model).ConstructListOfProcesses(
self.ProjectParameters["gravity"])
self.list_of_processes += process_factory.KratosProcessFactory(
self.model).ConstructListOfProcesses(
self.ProjectParameters["initial_conditions_process_list"])
self.list_of_processes += process_factory.KratosProcessFactory(
self.model).ConstructListOfProcesses(
self.ProjectParameters["boundary_conditions_process_list"])
elif self.problem_type == "solid":
self.list_of_processes = process_factory.KratosProcessFactory(
self.model).ConstructListOfProcesses(
self.ProjectParameters["constraints_process_list"])
self.list_of_processes += process_factory.KratosProcessFactory(
self.model).ConstructListOfProcesses(
self.ProjectParameters["loads_process_list"])
if (self.ProjectParameters.Has("list_other_processes") == True):
self.list_of_processes += process_factory.KratosProcessFactory(
self.model).ConstructListOfProcesses(
self.ProjectParameters["list_other_processes"])
if (self.ProjectParameters.Has("json_check_process") == True):
self.list_of_processes += process_factory.KratosProcessFactory(
self.model).ConstructListOfProcesses(
self.ProjectParameters["json_check_process"])
if (self.ProjectParameters.Has("json_output_process") == True):
self.list_of_processes += process_factory.KratosProcessFactory(
self.model).ConstructListOfProcesses(
self.ProjectParameters["json_output_process"])
if (self.ProjectParameters.Has("compare_two_files_check_process") ==
True):
self.list_of_processes += process_factory.KratosProcessFactory(
self.model).ConstructListOfProcesses(
self.ProjectParameters["compare_two_files_check_process"])
if (self.ProjectParameters.Has("recursive_remeshing_process") == True):
self.list_of_processes += process_factory.KratosProcessFactory(
self.model).ConstructListOfProcesses(
self.ProjectParameters["recursive_remeshing_process"])
for process in self.list_of_processes:
process.ExecuteInitialize()
# ### START SOLUTION ####
self.computing_model_part = self.solver.GetComputingModelPart()
self.root_model_part = self.computing_model_part.GetRootModelPart()
if (self.output_post == True):
self.gid_output.ExecuteBeforeSolutionLoop()
class kratosCSMAnalyzer((__import__("analyzer_base")).analyzerBaseClass):
# --------------------------------------------------------------------------
def __init__(self):
self.initializeGIDOutput()
self.initializeProcesses()
self.initializeSolutionLoop()
# --------------------------------------------------------------------------
def initializeProcesses(self):
import process_factory
#the process order of execution is important
self.list_of_processes = process_factory.KratosProcessFactory(
Model).ConstructListOfProcesses(
ProjectParameters["constraints_process_list"])
self.list_of_processes += process_factory.KratosProcessFactory(
Model).ConstructListOfProcesses(
ProjectParameters["loads_process_list"])
if (ProjectParameters.Has("problem_process_list")):
self.list_of_processes += process_factory.KratosProcessFactory(
Model).ConstructListOfProcesses(
ProjectParameters["problem_process_list"])
if (ProjectParameters.Has("output_process_list")):
self.list_of_processes += process_factory.KratosProcessFactory(
Model).ConstructListOfProcesses(
ProjectParameters["output_process_list"])
#print list of constructed processes
if (echo_level > 1):
for process in self.list_of_processes:
print(process)
for process in self.list_of_processes:
process.ExecuteInitialize()
# --------------------------------------------------------------------------
def initializeGIDOutput(self):
computing_model_part = CSM_solver.GetComputingModelPart()
problem_name = ProjectParameters["problem_data"][
"problem_name"].GetString()
from gid_output_process import GiDOutputProcess
output_settings = ProjectParameters["output_configuration"]
self.gid_output = GiDOutputProcess(computing_model_part, problem_name,
output_settings)
self.gid_output.ExecuteInitialize()
# --------------------------------------------------------------------------
def initializeSolutionLoop(self):
## Sets strategies, builders, linear solvers, schemes and solving info, and fills the buffer
CSM_solver.Initialize()
CSM_solver.SetEchoLevel(echo_level)
mesh_solver.Initialize()
for responseFunctionId in listOfResponseFunctions:
listOfResponseFunctions[responseFunctionId].initialize()
# Start process
for process in self.list_of_processes:
process.ExecuteBeforeSolutionLoop()
## Set results when are written in a single file
self.gid_output.ExecuteBeforeSolutionLoop()
# --------------------------------------------------------------------------
def analyzeDesignAndReportToCommunicator(self, currentDesign,
optimizationIteration,
communicator):
# Calculation of objective function
if communicator.isRequestingFunctionValueOf("strain_energy"):
self.initializeNewSolutionStep(optimizationIteration)
print("\n> Starting ALEApplication to update the mesh")
startTime = timer.time()
self.updateMeshForAnalysis()
print("> Time needed for updating the mesh = ",
round(timer.time() - startTime, 2), "s")
print("\n> Starting SolidMechanicsApplication to solve structure")
startTime = timer.time()
self.solveStructure(optimizationIteration)
print("> Time needed for solving the structure = ",
round(timer.time() - startTime, 2), "s")
print("\n> Starting calculation of response value")
startTime = timer.time()
listOfResponseFunctions["strain_energy"].calculate_value()
print("> Time needed for calculation of response value = ",
round(timer.time() - startTime, 2), "s")
communicator.reportFunctionValue(
"strain_energy",
listOfResponseFunctions["strain_energy"].get_value())
# Calculation of gradient of objective function
if communicator.isRequestingGradientOf("strain_energy"):
print("\n> Starting calculation of gradients")
startTime = timer.time()
listOfResponseFunctions["strain_energy"].calculate_gradient()
print("> Time needed for calculating gradients = ",
round(timer.time() - startTime, 2), "s")
gradientForCompleteModelPart = listOfResponseFunctions[
"strain_energy"].get_gradient()
gradientOnDesignSurface = {}
for node in currentDesign.Nodes:
gradientOnDesignSurface[
node.Id] = gradientForCompleteModelPart[node.Id]
# If contribution from mesh-motion to gradient shall be considered
# self.computeAndAddMeshDerivativesToGradient(gradientOnDesignSurface, gradientForCompleteModelPart)
communicator.reportGradient("strain_energy",
gradientOnDesignSurface)
# --------------------------------------------------------------------------
def initializeNewSolutionStep(self, optimizationIteration):
main_model_part.CloneTimeStep(optimizationIteration)
# --------------------------------------------------------------------------
def updateMeshForAnalysis(self):
# Extract surface nodes
sub_model_part_name = "surface_nodes"
GeometryUtilities(main_model_part).extract_surface_nodes(
sub_model_part_name)
# Apply shape update as boundary condition for computation of mesh displacement
for node in main_model_part.GetSubModelPart(sub_model_part_name).Nodes:
node.Fix(MESH_DISPLACEMENT_X)
node.Fix(MESH_DISPLACEMENT_Y)
node.Fix(MESH_DISPLACEMENT_Z)
disp = Vector(3)
disp[0] = node.GetSolutionStepValue(SHAPE_UPDATE_X)
disp[1] = node.GetSolutionStepValue(SHAPE_UPDATE_Y)
disp[2] = node.GetSolutionStepValue(SHAPE_UPDATE_Z)
node.SetSolutionStepValue(MESH_DISPLACEMENT, 0, disp)
# Solve for mesh-update
mesh_solver.Solve()
# Update reference mesh (Since shape updates are imposed as incremental quantities)
mesh_solver.UpdateReferenceMesh()
# --------------------------------------------------------------------------
def solveStructure(self, optimizationIteration):
# processes to be executed at the begining of the solution step
for process in self.list_of_processes:
process.ExecuteInitializeSolutionStep()
self.gid_output.ExecuteInitializeSolutionStep()
# Actual solution
CSM_solver.Solve()
for process in self.list_of_processes:
process.ExecuteFinalizeSolutionStep()
self.gid_output.ExecuteFinalizeSolutionStep()
# processes to be executed at the end of the solution step
for process in self.list_of_processes:
process.ExecuteFinalizeSolutionStep()
# processes to be executed before witting the output
for process in self.list_of_processes:
process.ExecuteBeforeOutputStep()
# write output results GiD: (frequency writing is controlled internally)
if (self.gid_output.IsOutputStep()):
self.gid_output.PrintOutput()
# processes to be executed after witting the output
for process in self.list_of_processes:
process.ExecuteAfterOutputStep()
# --------------------------------------------------------------------------
def computeAndAddMeshDerivativesToGradient(self, gradientOnDesignSurface,
gradientForCompleteModelPart):
# Here we solve the pseudo-elastic mesh-motion system again using modified BCs
# The contributions from the mesh derivatives appear as reaction forces
for node in main_model_part.Nodes:
# Apply dirichlet conditions
if node.Id in gradientOnDesignSurface.keys():
node.Fix(MESH_DISPLACEMENT_X)
node.Fix(MESH_DISPLACEMENT_Y)
node.Fix(MESH_DISPLACEMENT_Z)
xs = Vector(3)
xs[0] = 0.0
xs[1] = 0.0
xs[2] = 0.0
node.SetSolutionStepValue(MESH_DISPLACEMENT, 0, xs)
# Apply RHS conditions
else:
rhs = Vector(3)
rhs[0] = gradientForCompleteModelPart[node.Id][0]
rhs[1] = gradientForCompleteModelPart[node.Id][1]
rhs[2] = gradientForCompleteModelPart[node.Id][2]
node.SetSolutionStepValue(MESH_RHS, 0, rhs)
# Solve mesh-motion problem with previously modified BCs
mesh_solver.Solve()
# Compute and add gradient contribution from mesh motion
for node_id in gradientOnDesignSurface.keys():
node = main_model_part.Nodes[node_id]
sens_contribution = Vector(3)
sens_contribution = node.GetSolutionStepValue(MESH_REACTION)
gradientOnDesignSurface[
node.Id] = gradientOnDesignSurface[node_id] + sens_contribution
# --------------------------------------------------------------------------
def finalizeSolutionLoop(self):
for process in self.list_of_processes:
process.ExecuteFinalize()
self.gid_output.ExecuteFinalize()
class TestPatchTestSmallStrain(KratosUnittest.TestCase):
def setUp(self):
pass
def _add_variables(self,mp):
mp.AddNodalSolutionStepVariable(KratosMultiphysics.DISPLACEMENT)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.REACTION)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.VOLUME_ACCELERATION)
def _apply_BCs(self,mp,A,b):
for node in mp.Nodes:
node.Fix(KratosMultiphysics.DISPLACEMENT_X)
node.Fix(KratosMultiphysics.DISPLACEMENT_Y)
node.Fix(KratosMultiphysics.DISPLACEMENT_Z)
for node in mp.Nodes:
xvec = KratosMultiphysics.Vector(3)
xvec[0] = node.X0
xvec[1] = node.Y0
xvec[2] = node.Z0
u = KratosMultiphysics.Vector()
u = A*xvec
u += b
node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT,0,u)
def _apply_material_properties(self,mp,dim):
#define properties
mp.GetProperties()[1].SetValue(KratosMultiphysics.YOUNG_MODULUS,210e9)
mp.GetProperties()[1].SetValue(KratosMultiphysics.POISSON_RATIO,0.3)
mp.GetProperties()[1].SetValue(KratosMultiphysics.THICKNESS,1.0)
mp.GetProperties()[1].SetValue(KratosMultiphysics.DENSITY,1.0)
g = [0,0,0]
mp.GetProperties()[1].SetValue(KratosMultiphysics.VOLUME_ACCELERATION,g)
if(dim == 2):
cl = StructuralMechanicsApplication.LinearElasticPlaneStress2DLaw()
else:
cl = StructuralMechanicsApplication.LinearElastic3DLaw()
mp.GetProperties()[1].SetValue(KratosMultiphysics.CONSTITUTIVE_LAW,cl)
def _define_movement(self,dim):
if(dim == 2):
#define the applied motion - the idea is that the displacement is defined as u = A*xnode + b
#so that the displcement is linear and the exact F = I + A
A = KratosMultiphysics.Matrix(3,3)
A[0,0] = 1.0e-10; A[0,1] = 2.0e-10; A[0,2] = 0.0
A[1,0] = 0.5e-10; A[1,1] = 0.7e-10; A[1,2] = 0.0
A[2,1] = 0.0; A[2,1] = 0.0; A[2,2] = 0.0
b = KratosMultiphysics.Vector(3)
b[0] = 0.5e-10
b[1] = -0.2e-10
b[2] = 0.0
else:
#define the applied motion - the idea is that the displacement is defined as u = A*xnode + b
#so that the displcement is linear and the exact F = I + A
A = KratosMultiphysics.Matrix(3,3)
A[0,0] = 1.0e-10; A[0,1] = 2.0e-10; A[0,2] = 0.0
A[1,0] = 0.5e-10; A[1,1] = 0.7e-10; A[1,2] = 0.1e-10
A[2,1] = -0.2e-10; A[2,1] = 0.0; A[2,2] = -0.3e-10
b = KratosMultiphysics.Vector(3)
b[0] = 0.5e-10
b[1] = -0.2e-10
b[2] = 0.7e-10
return A,b
def _solve(self,mp):
#define a minimal newton raphson solver
linear_solver = KratosMultiphysics.SkylineLUFactorizationSolver()
builder_and_solver = KratosMultiphysics.ResidualBasedBlockBuilderAndSolver(linear_solver)
scheme = KratosMultiphysics.ResidualBasedIncrementalUpdateStaticScheme()
convergence_criterion = KratosMultiphysics.ResidualCriteria(1e-14,1e-20)
max_iters = 20
compute_reactions = True
reform_step_dofs = True
calculate_norm_dx = False
move_mesh_flag = True
strategy = KratosMultiphysics.ResidualBasedLinearStrategy(mp,
scheme,
linear_solver,
builder_and_solver,
compute_reactions,
reform_step_dofs,
calculate_norm_dx,
move_mesh_flag)
#strategy = KratosMultiphysics.ResidualBasedNewtonRaphsonStrategy(mp,
#scheme,
#linear_solver,
#convergence_criterion,
#builder_and_solver,
#max_iters,
#compute_reactions,
#reform_step_dofs,
#move_mesh_flag)
strategy.SetEchoLevel(0)
strategy.Check()
strategy.Solve()
def _check_results(self,mp,A,b):
##check that the results are exact on the nodes
for node in mp.Nodes:
xvec = KratosMultiphysics.Vector(len(b))
xvec[0] = node.X0
xvec[1] = node.Y0
xvec[2] = node.Z0
u = KratosMultiphysics.Vector(2)
u = A*xvec
u += b
d = node.GetSolutionStepValue(KratosMultiphysics.DISPLACEMENT)
self.assertAlmostEqual(d[0], u[0])
self.assertAlmostEqual(d[1], u[1])
self.assertAlmostEqual(d[2], u[2])
def _check_outputs(self,mp,A,dim):
E = mp.GetProperties()[1].GetValue(KratosMultiphysics.YOUNG_MODULUS)
NU =mp.GetProperties()[1].GetValue(KratosMultiphysics.POISSON_RATIO)
#given the matrix A, the analytic deformation graident is F+I
F = A
for i in range(3):
F[i,i] += 1.0
#here compute the Cauchy green strain tensor
Etensor = KratosMultiphysics.Matrix(3,3)
for i in range(3):
for j in range(3):
Etensor[i,j] = 0.0
for i in range(3):
for j in range(3):
for k in range(3):
Etensor[i,j] += A[k,i]*A[k,j]
for i in range(3):
Etensor[i,i] -= 1.0
for i in range(3):
for j in range(3):
Etensor[i,j] = 0.5*Etensor[i,j]
if(dim == 2):
#verify strain
reference_strain = KratosMultiphysics.Vector(3)
reference_strain[0] = Etensor[0,0]
reference_strain[1] = Etensor[1,1]
reference_strain[2] = 2.0*Etensor[0,1]
else:
reference_strain = KratosMultiphysics.Vector(6)
reference_strain[0] = Etensor[0,0]
reference_strain[1] = Etensor[1,1]
reference_strain[2] = Etensor[2,2]
reference_strain[3] = 2.0*Etensor[0,1]
reference_strain[4] = 2.0*Etensor[1,2]
reference_strain[5] = 2.0*Etensor[0,2]
for elem in mp.Elements:
out = elem.CalculateOnIntegrationPoints(KratosMultiphysics.GREEN_LAGRANGE_STRAIN_VECTOR, mp.ProcessInfo)
for strain in out:
for i in range(len(reference_strain)):
self.assertAlmostEqual(reference_strain[i], strain[i])
#finally compute stress
if(dim == 2):
#here assume plane stress
c1 = E / (1.00 - NU*NU);
c2 = c1 * NU;
c3 = 0.5* E / (1 + NU);
reference_stress = KratosMultiphysics.Vector(3)
reference_stress[0] = c1*reference_strain[0] + c2 * (reference_strain[1]) ;
reference_stress[1] = c1*reference_strain[1] + c2 * (reference_strain[0]) ;
reference_stress[2] = c3*reference_strain[2];
else:
c1 = E / (( 1.00 + NU ) * ( 1 - 2 * NU ) );
c2 = c1 * ( 1 - NU );
c3 = c1 * NU;
c4 = c1 * 0.5 * ( 1 - 2 * NU );
reference_stress = KratosMultiphysics.Vector(6)
reference_stress[0] = c2*reference_strain[0] + c3 * (reference_strain[1] + reference_strain[2])
reference_stress[1] = c2*reference_strain[1] + c3 * (reference_strain[0] + reference_strain[2])
reference_stress[2] = c2*reference_strain[2] + c3 * (reference_strain[0] + reference_strain[1])
reference_stress[3] = c4*reference_strain[3]
reference_stress[4] = c4*reference_strain[4]
reference_stress[5] = c4*reference_strain[5]
for elem in mp.Elements:
out = elem.CalculateOnIntegrationPoints(KratosMultiphysics.PK2_STRESS_VECTOR, mp.ProcessInfo)
for stress in out:
for i in range(len(reference_stress)):
self.assertAlmostEqual(reference_stress[i], stress[i],2)
def test_SmallDisplacementElement_2D_triangle(self):
dim = 2
mp = KratosMultiphysics.ModelPart("solid_part")
self._add_variables(mp)
self._apply_material_properties(mp,dim)
#create nodes
mp.CreateNewNode(1,0.5,0.5,0.0)
mp.CreateNewNode(2,0.7,0.2,0.0)
mp.CreateNewNode(3,0.9,0.8,0.0)
mp.CreateNewNode(4,0.3,0.7,0.0)
mp.CreateNewNode(5,0.6,0.6,0.0)
KratosMultiphysics.VariableUtils().AddDof(KratosMultiphysics.DISPLACEMENT_X, KratosMultiphysics.REACTION_X,mp)
KratosMultiphysics.VariableUtils().AddDof(KratosMultiphysics.DISPLACEMENT_Y, KratosMultiphysics.REACTION_Y,mp)
KratosMultiphysics.VariableUtils().AddDof(KratosMultiphysics.DISPLACEMENT_Z, KratosMultiphysics.REACTION_Z,mp)
#create a submodelpart for boundary conditions
bcs = mp.CreateSubModelPart("BoundaryCondtions")
bcs.AddNodes([1,2,3,4])
#create Element
mp.CreateNewElement("SmallDisplacementElement2D3N", 1, [1,2,5], mp.GetProperties()[1])
mp.CreateNewElement("SmallDisplacementElement2D3N", 2, [2,3,5], mp.GetProperties()[1])
mp.CreateNewElement("SmallDisplacementElement2D3N", 3, [3,4,5], mp.GetProperties()[1])
mp.CreateNewElement("SmallDisplacementElement2D3N", 4, [4,1,5], mp.GetProperties()[1])
A,b = self._define_movement(dim)
self._apply_BCs(bcs,A,b)
self._solve(mp)
self._check_results(mp,A,b)
self._check_outputs(mp,A,dim)
#checking consistent mass matrix
M = KratosMultiphysics.Matrix(0,0)
mp.Elements[1].CalculateMassMatrix(M,mp.ProcessInfo)
Area = mp.Elements[1].GetArea()
for i in range(3):
for j in range(3):
for k in range(dim):
if(i==j):
coeff = Area/6.0
else:
coeff = Area/12.0
self.assertAlmostEqual(M[i*dim+k,j*dim+k],coeff)
#self.__post_process(mp)
def test_SmallDisplacementElement_2D_quadrilateral(self):
dim = 2
mp = KratosMultiphysics.ModelPart("solid_part")
self._add_variables(mp)
self._apply_material_properties(mp,dim)
#create nodes
mp.CreateNewNode(1,0.00,3.00,0.00)
mp.CreateNewNode(2,1.00,2.25,0.00)
mp.CreateNewNode(3,0.75,1.00,0.00)
mp.CreateNewNode(4,2.25,2.00,0.00)
mp.CreateNewNode(5,0.00,0.00,0.00)
mp.CreateNewNode(6,3.00,3.00,0.00)
mp.CreateNewNode(7,2.00,0.75,0.00)
mp.CreateNewNode(8,3.00,0.00,0.00)
KratosMultiphysics.VariableUtils().AddDof(KratosMultiphysics.DISPLACEMENT_X, KratosMultiphysics.REACTION_X,mp)
KratosMultiphysics.VariableUtils().AddDof(KratosMultiphysics.DISPLACEMENT_Y, KratosMultiphysics.REACTION_Y,mp)
KratosMultiphysics.VariableUtils().AddDof(KratosMultiphysics.DISPLACEMENT_Z, KratosMultiphysics.REACTION_Z,mp)
#create a submodelpart for boundary conditions
bcs = mp.CreateSubModelPart("BoundaryCondtions")
bcs.AddNodes([1,5,6,8])
#create Element
mp.CreateNewElement("SmallDisplacementElement2D4N", 1, [8,7,3,5], mp.GetProperties()[1])
mp.CreateNewElement("SmallDisplacementElement2D4N", 2, [6,4,7,8], mp.GetProperties()[1])
mp.CreateNewElement("SmallDisplacementElement2D4N", 3, [1,2,4,6], mp.GetProperties()[1])
mp.CreateNewElement("SmallDisplacementElement2D4N", 4, [4,2,3,7], mp.GetProperties()[1])
mp.CreateNewElement("SmallDisplacementElement2D4N", 5, [2,1,5,3], mp.GetProperties()[1])
A,b = self._define_movement(dim)
self._apply_BCs(bcs,A,b)
self._solve(mp)
self._check_results(mp,A,b)
self._check_outputs(mp,A,dim)
#self.__post_process(mp)
def test_SmallDisplacementElement_3D_hexa(self):
dim = 3
mp = KratosMultiphysics.ModelPart("solid_part")
self._add_variables(mp)
self._apply_material_properties(mp,dim)
#create nodes
mp.CreateNewNode(1, 0.00000, 1.00000, 1.00000)
mp.CreateNewNode(2, 0.16500, 0.74500, 0.70200)
mp.CreateNewNode(3, 0.27300, 0.75000, 0.23000)
mp.CreateNewNode(4, 0.78800, 0.69300, 0.64400)
mp.CreateNewNode(5, 0.32000, 0.18600, 0.64300)
mp.CreateNewNode(6, 0.00000, 1.00000, 0.00000)
mp.CreateNewNode(7, 0.00000, 0.00000, 1.00000)
mp.CreateNewNode(8, 1.00000, 1.00000, 1.00000)
mp.CreateNewNode(9, 0.67700, 0.30500, 0.68300)
mp.CreateNewNode(10, 0.24900, 0.34200, 0.19200)
mp.CreateNewNode(11, 0.85000, 0.64900, 0.26300)
mp.CreateNewNode(12, 0.82600, 0.28800, 0.28800)
mp.CreateNewNode(13, 0.00000, 0.00000, 0.00000)
mp.CreateNewNode(14, 1.00000, 1.00000, 0.00000)
mp.CreateNewNode(15, 1.00000, 0.00000, 1.00000)
mp.CreateNewNode(16, 1.00000, 0.00000, 0.00000)
KratosMultiphysics.VariableUtils().AddDof(KratosMultiphysics.DISPLACEMENT_X, KratosMultiphysics.REACTION_X,mp)
KratosMultiphysics.VariableUtils().AddDof(KratosMultiphysics.DISPLACEMENT_Y, KratosMultiphysics.REACTION_Y,mp)
KratosMultiphysics.VariableUtils().AddDof(KratosMultiphysics.DISPLACEMENT_Z, KratosMultiphysics.REACTION_Z,mp)
#create a submodelpart for boundary conditions
bcs = mp.CreateSubModelPart("BoundaryCondtions")
bcs.AddNodes([1,6,7,8,13,14,15,16])
#create Element
mp.CreateNewElement("SmallDisplacementElement3D8N", 1,[10,5,2,3,13,7,1,6], mp.GetProperties()[1])
mp.CreateNewElement("SmallDisplacementElement3D8N", 2,[12,9,5,10,16,15,7,13], mp.GetProperties()[1])
mp.CreateNewElement("SmallDisplacementElement3D8N", 3,[12,11,3,10,9,4,2,5], mp.GetProperties()[1])
mp.CreateNewElement("SmallDisplacementElement3D8N", 4,[9,4,2,5,15,8,1,7], mp.GetProperties()[1])
mp.CreateNewElement("SmallDisplacementElement3D8N", 5,[4,11,3,2,8,14,6,1], mp.GetProperties()[1])
mp.CreateNewElement("SmallDisplacementElement3D8N", 6,[11,4,9,12,14,8,15,16], mp.GetProperties()[1])
mp.CreateNewElement("SmallDisplacementElement3D8N", 7,[11,12,10,3,14,16,13,6], mp.GetProperties()[1])
A,b = self._define_movement(dim)
self._apply_BCs(bcs,A,b)
self._solve(mp)
self._check_results(mp,A,b)
self._check_outputs(mp,A,dim)
#self.__post_process(mp)
def __post_process(self, main_model_part):
from gid_output_process import GiDOutputProcess
self.gid_output = GiDOutputProcess(main_model_part,
"gid_output",
KratosMultiphysics.Parameters("""
{
"result_file_configuration" : {
"gidpost_flags": {
"GiDPostMode": "GiD_PostBinary",
"WriteDeformedMeshFlag": "WriteUndeformed",
"WriteConditionsFlag": "WriteConditions",
"MultiFileFlag": "SingleFile"
},
"nodal_results" : ["DISPLACEMENT"],
"gauss_point_results" : ["GREEN_LAGRANGE_STRAIN_TENSOR","CAUCHY_STRESS_TENSOR"]
}
}
""")
)
self.gid_output.ExecuteInitialize()
self.gid_output.ExecuteBeforeSolutionLoop()
self.gid_output.ExecuteInitializeSolutionStep()
self.gid_output.PrintOutput()
self.gid_output.ExecuteFinalizeSolutionStep()
self.gid_output.ExecuteFinalize()
class kratosCSMAnalyzer( (__import__("analyzer_base")).analyzerBaseClass ):
# --------------------------------------------------------------------------
def __init__( self ):
self.initializeGIDOutput()
self.initializeProcesses()
self.initializeSolutionLoop()
# --------------------------------------------------------------------------
def initializeProcesses( self ):
import process_factory
#the process order of execution is important
self.list_of_processes = process_factory.KratosProcessFactory(Model).ConstructListOfProcesses( ProjectParameters["constraints_process_list"] )
self.list_of_processes += process_factory.KratosProcessFactory(Model).ConstructListOfProcesses( ProjectParameters["loads_process_list"] )
if(ProjectParameters.Has("problem_process_list")):
self.list_of_processes += process_factory.KratosProcessFactory(Model).ConstructListOfProcesses( ProjectParameters["problem_process_list"] )
if(ProjectParameters.Has("output_process_list")):
self.list_of_processes += process_factory.KratosProcessFactory(Model).ConstructListOfProcesses( ProjectParameters["output_process_list"] )
#print list of constructed processes
if(echo_level>1):
for process in self.list_of_processes:
print(process)
for process in self.list_of_processes:
process.ExecuteInitialize()
# --------------------------------------------------------------------------
def initializeGIDOutput( self ):
computing_model_part = CSM_solver.GetComputingModelPart()
problem_name = ProjectParameters["problem_data"]["problem_name"].GetString()
from gid_output_process import GiDOutputProcess
output_settings = ProjectParameters["output_configuration"]
self.gid_output = GiDOutputProcess(computing_model_part, problem_name, output_settings)
self.gid_output.ExecuteInitialize()
# --------------------------------------------------------------------------
def initializeSolutionLoop( self ):
## Sets strategies, builders, linear solvers, schemes and solving info, and fills the buffer
CSM_solver.Initialize()
CSM_solver.SetEchoLevel(echo_level)
for responseFunctionId in listOfResponseFunctions:
listOfResponseFunctions[responseFunctionId].Initialize()
# Start process
for process in self.list_of_processes:
process.ExecuteBeforeSolutionLoop()
## Set results when are written in a single file
self.gid_output.ExecuteBeforeSolutionLoop()
# --------------------------------------------------------------------------
def analyzeDesignAndReportToCommunicator( self, currentDesign, optimizationIteration, communicator ):
# Calculation of value of objective function
if communicator.isRequestingFunctionValueOf("strain_energy"):
self.initializeNewSolutionStep( optimizationIteration )
print("\n> Starting to update the mesh")
startTime = timer.time()
self.updateMeshForAnalysis( currentDesign )
print("> Time needed for updating the mesh = ",round(timer.time() - startTime,2),"s")
print("\n> Starting StructuralMechanicsApplication to solve structure")
startTime = timer.time()
self.solveStructure( optimizationIteration )
print("> Time needed for solving the structure = ",round(timer.time() - startTime,2),"s")
print("\n> Starting calculation of response value")
startTime = timer.time()
listOfResponseFunctions["strain_energy"].CalculateValue()
print("> Time needed for calculation of response value = ",round(timer.time() - startTime,2),"s")
communicator.reportFunctionValue("strain_energy", listOfResponseFunctions["strain_energy"].GetValue())
# Calculation of gradient of objective function
if communicator.isRequestingGradientOf("strain_energy"):
print("\n> Starting calculation of gradients")
startTime = timer.time()
listOfResponseFunctions["strain_energy"].CalculateGradient()
print("> Time needed for calculating gradients = ",round(timer.time() - startTime,2),"s")
gradientForCompleteModelPart = listOfResponseFunctions["strain_energy"].GetGradient()
gradientOnDesignSurface = {}
for node in currentDesign.Nodes:
gradientOnDesignSurface[node.Id] = gradientForCompleteModelPart[node.Id]
communicator.reportGradient("strain_energy", gradientOnDesignSurface)
# --------------------------------------------------------------------------
def initializeNewSolutionStep( self, optimizationIteration ):
main_model_part.CloneTimeStep( optimizationIteration )
# --------------------------------------------------------------------------
def updateMeshForAnalysis( self, currentDesign ):
for node in currentDesign.Nodes:
node.X0 = node.X0 + node.GetSolutionStepValue(SHAPE_UPDATE_X)
node.Y0 = node.Y0 + node.GetSolutionStepValue(SHAPE_UPDATE_Y)
node.Z0 = node.Z0 + node.GetSolutionStepValue(SHAPE_UPDATE_Z)
# --------------------------------------------------------------------------
def solveStructure( self, optimizationIteration ):
# processes to be executed at the begining of the solution step
for process in self.list_of_processes:
process.ExecuteInitializeSolutionStep()
self.gid_output.ExecuteInitializeSolutionStep()
# Actual solution
CSM_solver.Solve()
# processes to be executed at the end of the solution step
for process in self.list_of_processes:
process.ExecuteFinalizeSolutionStep()
# processes to be executed before witting the output
for process in self.list_of_processes:
process.ExecuteBeforeOutputStep()
# write output results GiD: (frequency writing is controlled internally)
if(self.gid_output.IsOutputStep()):
self.gid_output.PrintOutput()
self.gid_output.ExecuteFinalizeSolutionStep()
# processes to be executed after witting the output
for process in self.list_of_processes:
process.ExecuteAfterOutputStep()
# --------------------------------------------------------------------------
def finalizeSolutionLoop( self ):
for process in self.list_of_processes:
process.ExecuteFinalize()
self.gid_output.ExecuteFinalize()
class TestDynamicSearch(KratosUnittest.TestCase):
def setUp(self):
pass
def _dynamic_search_tests(self, input_filename, num_nodes):
KM.Logger.GetDefaultOutput().SetSeverity(KM.Logger.Severity.WARNING)
self.model = KM.Model()
self.main_model_part = self.model.CreateModelPart("Structure", 2)
## Creation of the Kratos model (build sub_model_parts or submeshes)
self.StructureModel = {"Structure": self.main_model_part}
self.main_model_part.AddNodalSolutionStepVariable(KM.DISPLACEMENT)
self.main_model_part.AddNodalSolutionStepVariable(KM.VELOCITY)
self.main_model_part.AddNodalSolutionStepVariable(KM.ACCELERATION)
self.main_model_part.AddNodalSolutionStepVariable(
KM.VOLUME_ACCELERATION)
self.main_model_part.AddNodalSolutionStepVariable(KM.REACTION)
self.main_model_part.AddNodalSolutionStepVariable(KM.NORMAL)
self.main_model_part.AddNodalSolutionStepVariable(
CSMA.LAGRANGE_MULTIPLIER_CONTACT_PRESSURE)
self.main_model_part.AddNodalSolutionStepVariable(CSMA.WEIGHTED_GAP)
self.main_model_part.AddNodalSolutionStepVariable(KM.NODAL_H)
self.main_model_part.CloneTimeStep(1.01)
KM.ModelPartIO(input_filename).ReadModelPart(self.main_model_part)
KM.VariableUtils().AddDof(KM.DISPLACEMENT_X, KM.REACTION_X,
self.main_model_part)
KM.VariableUtils().AddDof(KM.DISPLACEMENT_Y, KM.REACTION_Y,
self.main_model_part)
KM.VariableUtils().AddDof(KM.DISPLACEMENT_Z, KM.REACTION_Z,
self.main_model_part)
KM.VariableUtils().AddDof(CSMA.LAGRANGE_MULTIPLIER_CONTACT_PRESSURE,
CSMA.WEIGHTED_GAP, self.main_model_part)
if (self.main_model_part.HasSubModelPart("Contact")):
interface_model_part = self.main_model_part.GetSubModelPart(
"Contact")
else:
interface_model_part = self.main_model_part.CreateSubModelPart(
"Contact")
self.contact_model_part = self.main_model_part.GetSubModelPart(
"DISPLACEMENT_Displacement_Auto2")
model_part_slave = self.main_model_part.GetSubModelPart(
"Parts_Parts_Auto1")
model_part_master = self.main_model_part.GetSubModelPart(
"Parts_Parts_Auto2")
KM.VariableUtils().SetFlag(KM.SLAVE, False,
self.contact_model_part.Nodes)
KM.VariableUtils().SetFlag(KM.MASTER, True,
self.contact_model_part.Nodes)
KM.VariableUtils().SetFlag(KM.SLAVE, True, model_part_slave.Nodes)
KM.VariableUtils().SetFlag(KM.MASTER, False, model_part_slave.Nodes)
for node in model_part_slave.Nodes:
# DEBUG
#node.X -= 9.81 / 32.0
#node.SetSolutionStepValue(KM.DISPLACEMENT_X, -9.81 / 32.0)
node.SetSolutionStepValue(KM.ACCELERATION_X, 1, -9.81)
del (node)
self.main_model_part.ProcessInfo[KM.STEP] = 1
self.main_model_part.ProcessInfo[KM.DELTA_TIME] = 0.5
for prop in self.main_model_part.GetProperties():
prop[CSMA.INTEGRATION_ORDER_CONTACT] = 3
self.main_model_part.ProcessInfo[CSMA.ACTIVE_CHECK_FACTOR] = 3.0e-1
KM.VariableUtils().SetFlag(KM.INTERFACE, True,
self.contact_model_part.Nodes)
pre_process = CSMA.InterfacePreprocessCondition(self.main_model_part)
interface_parameters = KM.Parameters(
"""{"simplify_geometry": false}""")
pre_process.GenerateInterfacePart3D(self.contact_model_part,
interface_parameters)
# We copy the conditions to the ContactSubModelPart
for cond in self.contact_model_part.Conditions:
interface_model_part.AddCondition(cond)
del (cond)
for node in self.contact_model_part.Nodes:
interface_model_part.AddNode(node, 0)
del (node)
# We compute NODAL_H that can be used in the search and some values computation
self.find_nodal_h = KM.FindNodalHProcess(self.contact_model_part)
self.find_nodal_h.Execute()
# We initialize the conditions
alm_init_var = CSMA.ALMFastInit(self.contact_model_part)
alm_init_var.Execute()
search_parameters = KM.Parameters("""
{
"dynamic_search" : true
}
""")
if (num_nodes == 3):
contact_search = CSMA.TreeContactSearch3D3N(
self.main_model_part, search_parameters)
else:
contact_search = CSMA.TreeContactSearch3D4N(
self.main_model_part, search_parameters)
# We initialize the search utility
contact_search.CreatePointListMortar()
contact_search.InitializeMortarConditions()
contact_search.UpdateMortarConditions()
## DEBUG
#self.__post_process()
import from_json_check_result_process
check_parameters = KM.Parameters("""
{
"check_variables" : ["NORMAL_GAP"],
"input_file_name" : "",
"model_part_name" : "Structure",
"historical_value" : false,
"time_frequency" : 0.0,
"sub_model_part_name" : "Parts_Parts_Auto1"
}
""")
check_parameters["input_file_name"].SetString(input_filename +
"_dynamic_search.json")
check = from_json_check_result_process.FromJsonCheckResultProcess(
self.StructureModel, check_parameters)
check.ExecuteInitialize()
check.ExecuteBeforeSolutionLoop()
check.ExecuteFinalizeSolutionStep()
#import json_output_process
#out_parameters = KM.Parameters("""
#{
#"output_variables" : ["NORMAL_GAP"],
#"output_file_name" : "",
#"model_part_name" : "Structure",
#"historical_value" : false,
#"time_frequency" : 0.0,
#"sub_model_part_name" : "Parts_Parts_Auto1"
#}
#""")
#out_parameters["output_file_name"].SetString(input_filename + "_dynamic_search.json")
#out = json_output_process.JsonOutputProcess(self.StructureModel, out_parameters)
#out.ExecuteInitialize()
#out.ExecuteBeforeSolutionLoop()
#out.ExecuteFinalizeSolutionStep()
def test_dynamic_search_triangle(self):
input_filename = os.path.dirname(
os.path.realpath(__file__)
) + "/integration_tests/test_double_curvature_integration_triangle"
self._dynamic_search_tests(input_filename, 3)
def test_dynamic_search_quad(self):
input_filename = os.path.dirname(
os.path.realpath(__file__)
) + "/integration_tests/test_double_curvature_integration_quadrilateral"
self._dynamic_search_tests(input_filename, 4)
def __post_process(self):
from gid_output_process import GiDOutputProcess
self.gid_output = GiDOutputProcess(
self.main_model_part, "gid_output",
KM.Parameters("""
{
"result_file_configuration" : {
"gidpost_flags": {
"GiDPostMode": "GiD_PostBinary",
"WriteDeformedMeshFlag": "WriteUndeformed",
"MultiFileFlag": "SingleFile"
},
"nodal_results" : ["NORMAL","DISPLACEMENT","VELOCITY","ACCELERATION"],
"nodal_nonhistorical_results": ["DELTA_COORDINATES","AUXILIAR_COORDINATES","NORMAL_GAP"],
"nodal_flags_results": ["ACTIVE","SLAVE","MASTER"]
}
}
"""))
self.gid_output.ExecuteInitialize()
self.gid_output.ExecuteBeforeSolutionLoop()
self.gid_output.ExecuteInitializeSolutionStep()
self.gid_output.PrintOutput()
self.gid_output.ExecuteFinalizeSolutionStep()
self.gid_output.ExecuteFinalize()
class Solution(object):
def __init__(self):
#### TIME MONITORING START ####
# Time control starts
print(timer.ctime())
# Measure process time
self.t0p = timer.clock()
# Measure wall time
self.t0w = timer.time()
#### TIME MONITORING END ####
#### PARSING THE PARAMETERS ####
# Import input
parameter_file = open("ProjectParameters.json",'r')
self.ProjectParameters = KratosMultiphysics.Parameters(parameter_file.read())
# set echo level
self.echo_level = self.ProjectParameters["problem_data"]["echo_level"].GetInt()
print(" ")
# defining the number of threads:
num_threads = self.GetParallelSize()
print("::[KSM Simulation]:: [OMP USING",num_threads,"THREADS ]")
#parallel.PrintOMPInfo()
print(" ")
print("::[KSM Simulation]:: [Time Step:", self.ProjectParameters["problem_data"]["time_step"].GetDouble()," echo:", self.echo_level,"]")
#### Model_part settings start ####
# Defining the model_part
self.main_model_part = KratosMultiphysics.ModelPart(self.ProjectParameters["problem_data"]["model_part_name"].GetString())
self.main_model_part.ProcessInfo.SetValue(KratosMultiphysics.SPACE_DIMENSION, self.ProjectParameters["problem_data"]["dimension"].GetInt())
self.main_model_part.ProcessInfo.SetValue(KratosMultiphysics.DOMAIN_SIZE, self.ProjectParameters["problem_data"]["dimension"].GetInt())
self.main_model_part.ProcessInfo.SetValue(KratosMultiphysics.DELTA_TIME, self.ProjectParameters["problem_data"]["time_step"].GetDouble())
self.main_model_part.ProcessInfo.SetValue(KratosMultiphysics.TIME, self.ProjectParameters["problem_data"]["start_time"].GetDouble())
###TODO replace this "model" for real one once available in kratos core
self.Model = {self.ProjectParameters["problem_data"]["model_part_name"].GetString() : self.main_model_part}
#construct the solver (main setting methods are located in the solver_module)
solver_module = __import__(self.ProjectParameters["solver_settings"]["solver_type"].GetString())
self.solver = solver_module.CreateSolver(self.main_model_part, self.ProjectParameters["solver_settings"])
#### Output settings start ####
self.problem_path = os.getcwd()
self.problem_name = self.ProjectParameters["problem_data"]["problem_name"].GetString()
def AddMaterials(self):
# Assign material to model_parts (if Materials.json exists)
import process_factory
if os.path.isfile("Materials.json"):
materials_file = open("Materials.json",'r')
MaterialParameters = KratosMultiphysics.Parameters(materials_file.read())
if(MaterialParameters.Has("material_models_list")):
import KratosMultiphysics.ConstitutiveModelsApplication as KratosMaterials
## Get the list of the model_part's in the object Model
for i in range(self.ProjectParameters["solver_settings"]["problem_domain_sub_model_part_list"].size()):
part_name = self.ProjectParameters["solver_settings"]["problem_domain_sub_model_part_list"][i].GetString()
if( self.main_model_part.HasSubModelPart(part_name) ):
self.Model.update({part_name: self.main_model_part.GetSubModelPart(part_name)})
assign_materials_processes = process_factory.KratosProcessFactory(self.Model).ConstructListOfProcesses( MaterialParameters["material_models_list"] )
for process in assign_materials_processes:
process.Execute()
else:
print(" No Materials.json found ")
def AddProcesses(self):
# Build sub_model_parts or submeshes (rearrange parts for the application of custom processes)
## Get the list of the submodel part in the object Model
for i in range(self.ProjectParameters["solver_settings"]["processes_sub_model_part_list"].size()):
part_name = self.ProjectParameters["solver_settings"]["processes_sub_model_part_list"][i].GetString()
if( self.main_model_part.HasSubModelPart(part_name) ):
self.Model.update({part_name: self.main_model_part.GetSubModelPart(part_name)})
# Obtain the list of the processes to be applied
import process_handler
process_parameters = KratosMultiphysics.Parameters("{}")
process_parameters.AddValue("echo_level", self.ProjectParameters["problem_data"]["echo_level"])
process_parameters.AddValue("constraints_process_list", self.ProjectParameters["constraints_process_list"])
process_parameters.AddValue("loads_process_list", self.ProjectParameters["loads_process_list"])
if( self.ProjectParameters.Has("problem_process_list") ):
process_parameters.AddValue("problem_process_list", self.ProjectParameters["problem_process_list"])
if( self.ProjectParameters.Has("output_process_list") ):
process_parameters.AddValue("output_process_list", self.ProjectParameters["output_process_list"])
return (process_handler.ProcessHandler(self.Model, process_parameters))
def Run(self):
self.Initialize()
self.RunMainTemporalLoop()
self.Finalize()
def Initialize(self):
#### INITIALIZE ####
# Add variables (always before importing the model part)
self.solver.AddVariables()
# Read model_part (note: the buffer_size is set here) (restart is read here)
self.solver.ImportModelPart()
# Add dofs (always after importing the model part)
if((self.main_model_part.ProcessInfo).Has(KratosMultiphysics.IS_RESTARTED)):
if(self.main_model_part.ProcessInfo[KratosMultiphysics.IS_RESTARTED] == False):
self.solver.AddDofs()
else:
self.solver.AddDofs()
# Add materials (assign material to model_parts if Materials.json exists)
self.AddMaterials()
# Add processes
self.model_processes = self.AddProcesses()
self.model_processes.ExecuteInitialize()
# Print model_part and properties
if(self.echo_level>1):
print("")
print(self.main_model_part)
for properties in self.main_model_part.Properties:
print(properties)
#### START SOLUTION ####
self.computing_model_part = self.solver.GetComputingModelPart()
## Sets strategies, builders, linear solvers, schemes and solving info, and fills the buffer
self.solver.Initialize()
self.solver.SetEchoLevel(self.echo_level)
# Initialize GiD I/O (gid outputs, file_lists)
self.SetGraphicalOutput()
self.GraphicalOutputExecuteInitialize()
print(" ")
print("::[KSM Simulation]:: Analysis -START- ")
self.model_processes.ExecuteBeforeSolutionLoop()
self.GraphicalOutputExecuteBeforeSolutionLoop()
# Set time settings
self.step = self.main_model_part.ProcessInfo[KratosMultiphysics.STEP]
self.time = self.main_model_part.ProcessInfo[KratosMultiphysics.TIME]
self.end_time = self.ProjectParameters["problem_data"]["end_time"].GetDouble()
self.delta_time = self.ProjectParameters["problem_data"]["time_step"].GetDouble()
sys.stdout.flush()
def RunMainTemporalLoop(self):
# Solving the problem (time integration)
while(self.time < self.end_time):
self.InitializeSolutionStep()
self.SolveSolutionStep()
self.FinalizeSolutionStep()
sys.stdout.flush()
def InitializeSolutionStep(self):
# current time parameters
# self.main_model_part.ProcessInfo.GetPreviousSolutionStepInfo()[KratosMultiphysics.DELTA_TIME] = self.delta_time
self.delta_time = self.main_model_part.ProcessInfo[KratosMultiphysics.DELTA_TIME]
self.time = self.time + self.delta_time
self.step = self.step + 1
self.main_model_part.ProcessInfo[KratosMultiphysics.STEP] = self.step
self.main_model_part.CloneTimeStep(self.time)
print(" [STEP:",self.step," TIME:",self.time,"]")
# processes to be executed at the begining of the solution step
self.model_processes.ExecuteInitializeSolutionStep()
self.GraphicalOutputExecuteInitializeSolutionStep()
self.solver.InitializeSolutionStep()
def SolveSolutionStep(self):
self.clock_time = self.StartTimeMeasuring();
#self.solver.Predict()
#self.solver.SolveSolutionStep()
#self.solver.FinalizeSolutionStep()
self.solver.Solve()
self.StopTimeMeasuring(self.clock_time,"Solving", False);
def FinalizeSolutionStep(self):
self.GraphicalOutputExecuteFinalizeSolutionStep()
# processes to be executed at the end of the solution step
self.model_processes.ExecuteFinalizeSolutionStep()
# processes to be executed before witting the output
self.model_processes.ExecuteBeforeOutputStep()
# write output results GiD: (frequency writing is controlled internally)
self.GraphicalOutputPrintOutput()
# processes to be executed after witting the output
self.model_processes.ExecuteAfterOutputStep()
def Finalize(self):
# Ending the problem (time integration finished)
self.GraphicalOutputExecuteFinalize()
self.model_processes.ExecuteFinalize()
print("::[KSM Simulation]:: Analysis -END- ")
print(" ")
# Check solving information for any problem
#~ self.solver.InfoCheck() # InfoCheck not implemented yet.
#### END SOLUTION ####
# Measure process time
tfp = timer.clock()
# Measure wall time
tfw = timer.time()
print("::[KSM Simulation]:: [Elapsed Time = %.2f" % (tfw - self.t0w),"seconds] (%.2f" % (tfp - self.t0p),"seconds of cpu/s time)")
print(timer.ctime())
def SetGraphicalOutput(self):
from gid_output_process import GiDOutputProcess
self.output_settings = self.ProjectParameters["output_configuration"]
self.graphical_output = GiDOutputProcess(self.computing_model_part,
self.problem_name,
self.output_settings)
def GraphicalOutputExecuteInitialize(self):
self.graphical_output.ExecuteInitialize()
def GraphicalOutputExecuteBeforeSolutionLoop(self):
# writing a initial state results file or single file (if no restart)
if((self.main_model_part.ProcessInfo).Has(KratosMultiphysics.IS_RESTARTED)):
if(self.main_model_part.ProcessInfo[KratosMultiphysics.IS_RESTARTED] == False):
self.graphical_output.ExecuteBeforeSolutionLoop()
def GraphicalOutputExecuteInitializeSolutionStep(self):
self.graphical_output.ExecuteInitializeSolutionStep()
def GraphicalOutputExecuteFinalizeSolutionStep(self):
self.graphical_output.ExecuteFinalizeSolutionStep()
def GraphicalOutputPrintOutput(self):
if(self.graphical_output.IsOutputStep()):
self.graphical_output.PrintOutput()
def GraphicalOutputExecuteFinalize(self):
self.graphical_output.ExecuteFinalize()
def SetParallelSize(self, num_threads):
parallel = KratosMultiphysics.OpenMPUtils()
parallel.SetNumThreads(int(num_threads))
def GetParallelSize(self):
parallel = KratosMultiphysics.OpenMPUtils()
return parallel.GetNumThreads()
def StartTimeMeasuring(self):
# Measure process time
time_ip = timer.clock()
return time_ip
def StopTimeMeasuring(self, time_ip, process, report):
# Measure process time
time_fp = timer.clock()
if( report ):
used_time = time_fp - time_ip
print("::[KSM Simulation]:: [ %.2f" % round(used_time,2),"s", process," ] ")
class TestPatchTestShells(KratosUnittest.TestCase):
def setUp(self):
pass
def _add_variables(self, mp):
mp.AddNodalSolutionStepVariable(KratosMultiphysics.DISPLACEMENT)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.ROTATION)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.REACTION)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.REACTION_MOMENT)
mp.AddNodalSolutionStepVariable(KratosMultiphysics.VOLUME_ACCELERATION)
mp.AddNodalSolutionStepVariable(
StructuralMechanicsApplication.POINT_LOAD)
def _add_dofs(self, mp):
# Adding the dofs AND their corresponding reaction!
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_X, KratosMultiphysics.REACTION_X,
mp)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_Y, KratosMultiphysics.REACTION_Y,
mp)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_Z, KratosMultiphysics.REACTION_Z,
mp)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.ROTATION_X,
KratosMultiphysics.REACTION_MOMENT_X, mp)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.ROTATION_Y,
KratosMultiphysics.REACTION_MOMENT_Y, mp)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.ROTATION_Z,
KratosMultiphysics.REACTION_MOMENT_Z, mp)
def _create_nodes(self, mp, element_name):
mp.CreateNewNode(1, -0.5, -0.45, 0.1)
mp.CreateNewNode(2, 0.7, -0.5, 0.2)
mp.CreateNewNode(3, 0.55, 0.6, 0.15)
mp.CreateNewNode(4, -0.48, 0.65, 0.0)
mp.CreateNewNode(5, 0.02, -0.01, -0.15)
if element_name.endswith(
"4N"): # create aditional nodes needed for quad-setup
mp.CreateNewNode(6, -0.03, -0.5, 0.0)
mp.CreateNewNode(7, 0.51, 0.02, 0.03)
mp.CreateNewNode(8, -0.01, 0.52, -0.05)
mp.CreateNewNode(9, -0.49, -0.0, 0.0)
def _create_elements(self, mp, element_name):
if element_name.endswith("4N"): # Quadrilaterals
mp.CreateNewElement(element_name, 1, [1, 6, 5, 9],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 2, [6, 2, 7, 5],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 3, [5, 7, 3, 8],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 4, [9, 5, 8, 4],
mp.GetProperties()[1])
else: # Triangles
mp.CreateNewElement(element_name, 1, [1, 2, 5],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 2, [2, 3, 5],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 3, [3, 4, 5],
mp.GetProperties()[1])
mp.CreateNewElement(element_name, 4, [4, 1, 5],
mp.GetProperties()[1])
def _apply_dirichlet_BCs(self, mp):
KratosMultiphysics.VariableUtils().ApplyFixity(
KratosMultiphysics.DISPLACEMENT_X, True, mp.Nodes)
KratosMultiphysics.VariableUtils().ApplyFixity(
KratosMultiphysics.DISPLACEMENT_Y, True, mp.Nodes)
KratosMultiphysics.VariableUtils().ApplyFixity(
KratosMultiphysics.DISPLACEMENT_Z, True, mp.Nodes)
KratosMultiphysics.VariableUtils().ApplyFixity(
KratosMultiphysics.ROTATION_X, True, mp.Nodes)
KratosMultiphysics.VariableUtils().ApplyFixity(
KratosMultiphysics.ROTATION_Y, True, mp.Nodes)
KratosMultiphysics.VariableUtils().ApplyFixity(
KratosMultiphysics.ROTATION_Z, True, mp.Nodes)
def _apply_neumann_BCs(self, mp):
for node in mp.Nodes:
node.SetSolutionStepValue(
StructuralMechanicsApplication.POINT_LOAD, 0, [6.1, -5.5, 8.9])
mp.CreateNewCondition("PointLoadCondition3D1N", 1, [node.Id],
mp.GetProperties()[1])
def _apply_material_properties(self, mp):
#define properties
mp.GetProperties()[1].SetValue(KratosMultiphysics.YOUNG_MODULUS, 100e3)
mp.GetProperties()[1].SetValue(KratosMultiphysics.POISSON_RATIO, 0.3)
mp.GetProperties()[1].SetValue(KratosMultiphysics.THICKNESS, 1.0)
mp.GetProperties()[1].SetValue(KratosMultiphysics.DENSITY, 1.0)
g = [0, 0, 0]
mp.GetProperties()[1].SetValue(KratosMultiphysics.VOLUME_ACCELERATION,
g)
cl = StructuralMechanicsApplication.LinearElasticPlaneStress2DLaw()
mp.GetProperties()[1].SetValue(KratosMultiphysics.CONSTITUTIVE_LAW, cl)
def _solve(self, mp):
#define a minimal newton raphson solver
linear_solver = KratosMultiphysics.SkylineLUFactorizationSolver()
builder_and_solver = KratosMultiphysics.ResidualBasedBlockBuilderAndSolver(
linear_solver)
scheme = KratosMultiphysics.ResidualBasedIncrementalUpdateStaticScheme(
)
convergence_criterion = KratosMultiphysics.ResidualCriteria(
1e-14, 1e-20)
max_iters = 20
compute_reactions = True
reform_step_dofs = True
calculate_norm_dx = False
move_mesh_flag = True
strategy = KratosMultiphysics.ResidualBasedLinearStrategy(
mp, scheme, linear_solver, builder_and_solver, compute_reactions,
reform_step_dofs, calculate_norm_dx, move_mesh_flag)
strategy.SetEchoLevel(0)
strategy.Check()
strategy.Solve()
def _check_results(self, node, displacement_results, rotation_results):
#check that the results are exact on the node
disp = node.GetSolutionStepValue(KratosMultiphysics.DISPLACEMENT)
self.assertAlmostEqual(disp[0], displacement_results[0], 10)
self.assertAlmostEqual(disp[1], displacement_results[1], 10)
self.assertAlmostEqual(disp[2], displacement_results[2], 10)
rot = node.GetSolutionStepValue(KratosMultiphysics.ROTATION)
self.assertAlmostEqual(rot[0], rotation_results[0], 10)
self.assertAlmostEqual(rot[1], rotation_results[1], 10)
self.assertAlmostEqual(rot[2], rotation_results[2], 10)
def execute_shell_test(self, current_model, element_name,
displacement_results, rotation_results,
do_post_processing):
mp = current_model.CreateModelPart("solid_part")
mp.SetBufferSize(2)
self._add_variables(mp)
self._apply_material_properties(mp)
self._create_nodes(mp, element_name)
self._add_dofs(mp)
self._create_elements(mp, element_name)
#create a submodelpart for dirichlet boundary conditions
bcs_dirichlet = mp.CreateSubModelPart("BoundaryCondtionsDirichlet")
bcs_dirichlet.AddNodes([1, 2, 4])
#create a submodelpart for neumann boundary conditions
bcs_neumann = mp.CreateSubModelPart("BoundaryCondtionsNeumann")
bcs_neumann.AddNodes([3])
self._apply_dirichlet_BCs(bcs_dirichlet)
self._apply_neumann_BCs(bcs_neumann)
self._solve(mp)
self._check_results(mp.Nodes[3], displacement_results,
rotation_results)
if do_post_processing:
self.__post_process(mp)
def test_thin_shell_triangle(self):
element_name = "ShellThinElementCorotational3D3N"
displacement_results = [
0.0002324779832, -0.0002233435997, 0.0002567143455
]
rotation_results = [
0.0003627433341, -0.0001926662603, -0.0004682681704
]
current_model = KratosMultiphysics.Model()
self.execute_shell_test(current_model, element_name,
displacement_results, rotation_results,
False) # Do PostProcessing for GiD?
def test_thick_shell_triangle(self):
element_name = "ShellThickElementCorotational3D3N"
displacement_results = [
7.18997182e-05, -0.0001572802804, 0.0005263940488
]
rotation_results = [0.0003316612014, -0.0002798472414, 5.141506e-07]
current_model = KratosMultiphysics.Model()
self.execute_shell_test(current_model, element_name,
displacement_results, rotation_results,
False) # Do PostProcessing for GiD?
def test_thin_shell_quadrilateral(self):
element_name = "ShellThinElementCorotational3D4N"
displacement_results = [
0.0021909310921, -0.0021683746759, 0.0007191338749
]
rotation_results = [0.0028191154606, 0.0008171818407, -0.0069146010725]
current_model = KratosMultiphysics.Model()
self.execute_shell_test(current_model, element_name,
displacement_results, rotation_results,
False) # Do PostProcessing for GiD?
def test_thick_shell_quadrilateral(self):
element_name = "ShellThickElementCorotational3D4N"
displacement_results = [
0.0003572969872, -0.0006341259132, 0.00127807995001
]
rotation_results = [
0.0012082600485, -0.0004098356773, -0.0011673798349
]
current_model = KratosMultiphysics.Model()
self.execute_shell_test(current_model, element_name,
displacement_results, rotation_results,
False) # Do PostProcessing for GiD?
def __post_process(self, main_model_part):
from gid_output_process import GiDOutputProcess
self.gid_output = GiDOutputProcess(
main_model_part, "gid_output",
KratosMultiphysics.Parameters("""
{
"result_file_configuration" : {
"gidpost_flags": {
"GiDPostMode": "GiD_PostBinary",
"WriteDeformedMeshFlag": "WriteUndeformed",
"WriteConditionsFlag": "WriteConditions",
"MultiFileFlag": "SingleFile"
},
"nodal_results" : ["DISPLACEMENT", "ROTATION", "POINT_LOAD"],
"gauss_point_results" : ["GREEN_LAGRANGE_STRAIN_TENSOR","CAUCHY_STRESS_TENSOR"]
}
}
"""))
self.gid_output.ExecuteInitialize()
self.gid_output.ExecuteBeforeSolutionLoop()
self.gid_output.ExecuteInitializeSolutionStep()
self.gid_output.PrintOutput()
self.gid_output.ExecuteFinalizeSolutionStep()
self.gid_output.ExecuteFinalize()
class ManufacturedSolutionProblem:
def __init__(self, ProjectParameters, input_file_name, print_output, problem_type, analytical_solution_type):
self.problem_type = problem_type
self.print_output = print_output
self.input_file_name = input_file_name
self.ProjectParameters = ProjectParameters
self.analytical_solution_type = analytical_solution_type
def SetFluidProblem(self):
## Set the current mesh case problem info
if (self.problem_type == "analytical_solution"):
self.ProjectParameters["problem_data"]["problem_name"].SetString(self.input_file_name+"_manufactured")
else:
self.ProjectParameters["problem_data"]["problem_name"].SetString(self.input_file_name)
self.ProjectParameters["solver_settings"]["model_import_settings"]["input_filename"].SetString(self.input_file_name)
## Fluid model part definition
self.main_model_part = KratosMultiphysics.ModelPart(self.ProjectParameters["problem_data"]["model_part_name"].GetString())
self.main_model_part.ProcessInfo.SetValue(KratosMultiphysics.DOMAIN_SIZE, self.ProjectParameters["problem_data"]["domain_size"].GetInt())
###TODO replace this "model" for real one once available
Model = {self.ProjectParameters["problem_data"]["model_part_name"].GetString() : self.main_model_part}
## Solver construction
import python_solvers_wrapper_fluid
self.solver = python_solvers_wrapper_fluid.CreateSolver(self.main_model_part, self.ProjectParameters)
self.solver.AddVariables()
## Read the model - note that SetBufferSize is done here
self.solver.ImportModelPart()
## Add AddDofs
self.solver.AddDofs()
## Initialize GiD I/O
if (self.print_output):
from gid_output_process import GiDOutputProcess
self.gid_output = GiDOutputProcess(self.solver.GetComputingModelPart(),
self.ProjectParameters["problem_data"]["problem_name"].GetString() ,
self.ProjectParameters["output_configuration"])
self.gid_output.ExecuteInitialize()
## Get the list of the skin submodel parts in the object Model
for i in range(self.ProjectParameters["solver_settings"]["skin_parts"].size()):
skin_part_name = self.ProjectParameters["solver_settings"]["skin_parts"][i].GetString()
Model.update({skin_part_name: self.main_model_part.GetSubModelPart(skin_part_name)})
for i in range(self.ProjectParameters["solver_settings"]["no_skin_parts"].size()):
no_skin_part_name = self.ProjectParameters["solver_settings"]["no_skin_parts"][i].GetString()
Model.update({no_skin_part_name: self.main_model_part.GetSubModelPart(no_skin_part_name)})
## Solver initialization
self.solver.Initialize()
## Compute and set the nodal area
self.SetNodalArea()
## Set the distance to 1 to have full fluid elements
if (self.ProjectParameters["solver_settings"]["solver_type"].GetString() == "Embedded"):
for node in self.main_model_part.Nodes:
node.SetSolutionStepValue(KratosMultiphysics.DISTANCE, 0, 1.0)
## Fix the pressure in one node (bottom left corner)
for node in self.main_model_part.Nodes:
if ((node.X<0.001) and (node.Y<0.001)):
node.Fix(KratosMultiphysics.PRESSURE)
node.SetSolutionStepValue(KratosMultiphysics.PRESSURE, 0, 0.0)
def SolveFluidProblem(self):
## Stepping and time settings
end_time = self.ProjectParameters["problem_data"]["end_time"].GetDouble()
time = 0.0
step = 0
out = 0.0
if (self.print_output):
self.gid_output.ExecuteBeforeSolutionLoop()
while(time <= end_time):
Dt = self.solver.ComputeDeltaTime()
step += 1
time += Dt
self.main_model_part.CloneTimeStep(time)
self.main_model_part.ProcessInfo[KratosMultiphysics.STEP] = step
if (self.print_output):
self.gid_output.ExecuteInitializeSolutionStep()
if (self.problem_type == "analytical_solution"):
# Fix the manufactured solution values (only for visualization purposes)
self.SetManufacturedSolutionValues(fix=True, set_only_boundaries=False)
else:
# Set the manufactured solution source terms
self.SetManufacturedSolutionValues(fix=True, set_only_boundaries=True)
self.SetManufacturedSolutionSourceValues()
if (step < 3):
self.SetManufacturedSolutionValues(False) # Set the analytical solution in the two first steps
else:
if (self.problem_type != "analytical_solution"):
self.solver.Solve()
if (self.print_output):
self.gid_output.ExecuteFinalizeSolutionStep()
if self.gid_output.IsOutputStep():
self.gid_output.PrintOutput()
out = out + Dt
if (self.print_output):
self.gid_output.ExecuteFinalize()
def SetManufacturedSolutionValues(self, fix=True, set_only_boundaries=False):
## Set the analytical solution for the manufactured solution computation
time = self.main_model_part.ProcessInfo[KratosMultiphysics.TIME]
if (set_only_boundaries == False):
for node in self.main_model_part.Nodes:
vel = self.ComputeNodalVelocityManufacturedSolution(node, time)
pres = self.ComputeNodalPressureManufacturedSolution(node)
if (fix == True):
node.Fix(KratosMultiphysics.VELOCITY_X)
node.Fix(KratosMultiphysics.VELOCITY_Y)
node.Fix(KratosMultiphysics.PRESSURE)
node.SetSolutionStepValue(KratosMultiphysics.VELOCITY_X, 0, vel[0])
node.SetSolutionStepValue(KratosMultiphysics.VELOCITY_Y, 0, vel[1])
node.SetSolutionStepValue(KratosMultiphysics.PRESSURE, 0, pres)
else:
for node in self.main_model_part.GetSubModelPart("Inlet2D_Contour").Nodes:
vel = self.ComputeNodalVelocityManufacturedSolution(node, time)
if (fix == True):
node.Fix(KratosMultiphysics.VELOCITY_X)
node.Fix(KratosMultiphysics.VELOCITY_Y)
node.SetSolutionStepValue(KratosMultiphysics.VELOCITY_X, 0, vel[0])
node.SetSolutionStepValue(KratosMultiphysics.VELOCITY_Y, 0, vel[1])
def SetNodalArea(self):
# Compute nodal area
for element in self.main_model_part.Elements:
x = []
y = []
for node in element.GetNodes():
x.append(node.X)
y.append(node.Y)
Area = 0.5*((x[1]*y[2]-x[2]*y[1])+(x[2]*y[0]-x[0]*y[2])+(x[0]*y[1]-x[1]*y[0])) # Element area (Jacobian/2)
# print("Element "+str(element.Id)+" area: "+str(Area))
for node in element.GetNodes():
aux = node.GetSolutionStepValue(KratosMultiphysics.NODAL_AREA) # Current nodal area (from other elements)
aux += Area/3.0 # Accumulate the current element nodal area
node.SetSolutionStepValue(KratosMultiphysics.NODAL_AREA, 0, aux)
node.SetValue(KratosMultiphysics.NODAL_AREA, aux)
## Check nodal area computation (squared shaped domain of 1x1 m)
AreaTotal = 0.0
for node in self.main_model_part.Nodes:
# print("Node id "+str(node.Id)+" nodal area: "+str(node.GetValue(KratosMultiphysics.NODAL_AREA)))
AreaTotal += node.GetValue(KratosMultiphysics.NODAL_AREA)
if (abs(1.0-AreaTotal) > 1e-5):
print("Obtained total area: "+str(AreaTotal))
raise Exception("Error in NODAL_AREA computation.")
def SetManufacturedSolutionSourceValues(self):
## Set the body force as source term
time = self.main_model_part.ProcessInfo[KratosMultiphysics.TIME]
for node in self.main_model_part.Nodes:
rho = node.GetSolutionStepValue(KratosMultiphysics.DENSITY)
# If VMS2D element is used, set mu as the Kinematic viscosity
if (self.ProjectParameters["solver_settings"]["solver_type"].GetString() == "Embedded"):
mu = node.GetSolutionStepValue(KratosMultiphysics.DYNAMIC_VISCOSITY)
elif (self.ProjectParameters["solver_settings"]["solver_type"].GetString() == "Monolithic"):
mu = rho*node.GetSolutionStepValue(KratosMultiphysics.VISCOSITY)
rhof = self.ComputeNodalSourceTermManufacturedSolution(node, time, rho, mu)
node.SetSolutionStepValue(KratosMultiphysics.BODY_FORCE_X, 0, rhof[0]/rho) # Set the x-component body force field
node.SetSolutionStepValue(KratosMultiphysics.BODY_FORCE_Y, 0, rhof[1]/rho) # Set the y-component body force field
def ComputeVelocityErrorNorm(self):
err_v = 0
for node in self.main_model_part.Nodes:
weight = node.GetValue(KratosMultiphysics.NODAL_AREA)
vel_x = node.GetSolutionStepValue(KratosMultiphysics.VELOCITY_X)
vel_y = node.GetSolutionStepValue(KratosMultiphysics.VELOCITY_Y)
end_time = self.main_model_part.ProcessInfo[KratosMultiphysics.TIME]
analytical_vel = self.ComputeNodalVelocityManufacturedSolution(node, end_time)
err_x = analytical_vel[0] - vel_x
err_y = analytical_vel[1] - vel_y
err_node = err_x**2 + err_y**2
err_v += weight*err_node
return math.sqrt(err_v) # Note, there is no need of dividing by the total area (sum of weights) since it is 1
def ComputePressureErrorNorm(self):
err_p = 0
for node in self.main_model_part.Nodes:
weight = node.GetValue(KratosMultiphysics.NODAL_AREA)
pres = node.GetSolutionStepValue(KratosMultiphysics.PRESSURE)
analytical_pres = self.ComputeNodalPressureManufacturedSolution(node)
err_p += weight*(analytical_pres - pres)**2
return math.sqrt(err_p) # Note, there is no need of dividing by the total area (sum of weights) since it is 1
def ComputeNodalSourceTermManufacturedSolution(self, node, time, rho, mu):
if (self.analytical_solution_type == "sinusoidal_transient_field"):
rhofx = -rho*math.pi*math.sin(math.pi*node.X)*math.cos(math.pi*node.Y)*math.sin(math.pi*time) + 2*mu*math.pi*math.pi*math.sin(math.pi*node.X)*math.cos(math.pi*node.Y)*math.cos(math.pi*time) + rho*math.pi*(math.cos(math.pi*time)**2)*math.sin(math.pi*node.X)*math.cos(math.pi*node.X)
rhofy = rho*math.pi*math.cos(math.pi*node.X)*math.sin(math.pi*node.Y)*math.sin(math.pi*time) - 2*mu*math.pi*math.pi*math.cos(math.pi*node.X)*math.sin(math.pi*node.Y)*math.cos(math.pi*time) + rho*math.pi*(math.cos(math.pi*time)**2)*math.sin(math.pi*node.Y)*math.cos(math.pi*node.Y)
elif (self.analytical_solution_type == "nonlinear_transient_field"):
rhofx = rho*math.pi*(node.X**2)*node.Y*math.cos(math.pi*time) - 2*mu*node.Y*math.sin(math.pi*time) + rho*(node.X**3)*(node.Y**2)*((math.sin(math.pi*time))**2)
rhofy = -rho*math.pi*node.X*(node.Y**2)*math.cos(math.pi*time) + 2*mu*node.X*math.sin(math.pi*time) + rho*(node.X**2)*(node.Y**3)*((math.sin(math.pi*time))**2)
elif (self.analytical_solution_type == "nonlinear_stationary_field"):
rhofx = -2*mu*node.Y + rho*node.X**3*node.Y**2
rhofy = 2*mu*node.X + rho*node.X**2*node.Y**3
return [rhofx, rhofy]
def ComputeNodalVelocityManufacturedSolution(self, node, time):
if (self.analytical_solution_type == "sinusoidal_transient_field"):
vx = math.sin(math.pi*node.X)*math.cos(math.pi*node.Y)*math.cos(math.pi*time)
vy = -math.cos(math.pi*node.X)*math.sin(math.pi*node.Y)*math.cos(math.pi*time)
elif (self.analytical_solution_type == "nonlinear_transient_field"):
vx = node.X**2*node.Y*math.sin(math.pi*time)
vy = -node.X*node.Y**2*math.sin(math.pi*time)
elif (self.analytical_solution_type == "nonlinear_stationary_field"):
vx = node.X**2*node.Y
vy = -node.X*node.Y**2
return [vx, vy]
def ComputeNodalPressureManufacturedSolution(self, node):
# We consider solenoidal velocity fields in order to have a known zero pressure solution on the continuum
return 0.0
class KratosExecuteEmbeddedTest(KratosUnittest.TestCase):
def __init__(self, ProjectParameters):
self.ProjectParameters = ProjectParameters
self.vector_space = KratosMultiphysics.UblasSparseSpace()
self.main_model_part = KratosMultiphysics.ModelPart(
ProjectParameters["problem_data"]["model_part_name"].GetString())
self.main_model_part.ProcessInfo.SetValue(
KratosMultiphysics.DOMAIN_SIZE,
ProjectParameters["problem_data"]["domain_size"].GetInt())
Model = {
ProjectParameters["problem_data"]["model_part_name"].GetString():
self.main_model_part
}
## Solver construction
import python_solvers_wrapper_fluid
self.solver = python_solvers_wrapper_fluid.CreateSolver(
self.main_model_part, ProjectParameters)
self.solver.AddVariables()
## Read the model - note that SetBufferSize is done here
self.solver.ImportModelPart()
## Add AddDofs
self.solver.AddDofs()
## Initialize GiD I/O
self.output_flag = False
if (self.output_flag == True):
from gid_output_process import GiDOutputProcess
self.gid_output = GiDOutputProcess(
self.solver.GetComputingModelPart(),
ProjectParameters["problem_data"]["problem_name"].GetString(),
ProjectParameters["output_configuration"])
self.gid_output.ExecuteInitialize()
## Solver initialization
self.solver.Initialize()
## Get the list of the skin submodel parts in the object Model
for i in range(
ProjectParameters["solver_settings"]["skin_parts"].size()):
skin_part_name = ProjectParameters["solver_settings"][
"skin_parts"][i].GetString()
Model.update({
skin_part_name:
self.main_model_part.GetSubModelPart(skin_part_name)
})
## Get the gravity submodel part in the object Model
for i in range(ProjectParameters["gravity"].size()):
gravity_part_name = ProjectParameters["gravity"][i]["Parameters"][
"model_part_name"].GetString()
Model.update({
gravity_part_name:
self.main_model_part.GetSubModelPart(gravity_part_name)
})
## Processes construction
import process_factory
self.list_of_processes = process_factory.KratosProcessFactory(
Model).ConstructListOfProcesses(ProjectParameters["gravity"])
self.list_of_processes += process_factory.KratosProcessFactory(
Model).ConstructListOfProcesses(
ProjectParameters["boundary_conditions_process_list"])
## Processes initialization
for process in self.list_of_processes:
process.ExecuteInitialize()
def Solve(self):
## Stepping and time settings
end_time = self.ProjectParameters["problem_data"][
"end_time"].GetDouble()
time = 0.0
step = 0
if (self.output_flag == True):
self.gid_output.ExecuteBeforeSolutionLoop()
for process in self.list_of_processes:
process.ExecuteBeforeSolutionLoop()
while (time <= end_time):
Dt = self.solver.ComputeDeltaTime()
time = time + Dt
step = step + 1
self.main_model_part.CloneTimeStep(time)
for process in self.list_of_processes:
process.ExecuteInitializeSolutionStep()
if (self.output_flag == True):
self.gid_output.ExecuteInitializeSolutionStep()
if (step >= 3):
self.solver.Solve()
for process in self.list_of_processes:
process.ExecuteFinalizeSolutionStep()
if (self.output_flag == True):
self.gid_output.ExecuteFinalizeSolutionStep()
for process in self.list_of_processes:
process.ExecuteBeforeOutputStep()
if (self.output_flag == True):
self.gid_output.PrintOutput()
for process in self.list_of_processes:
process.ExecuteAfterOutputStep()
for process in self.list_of_processes:
process.ExecuteFinalize()
class Kratos_Execute_Test:
def __init__(self, ProjectParameters):
self.ProjectParameters = ProjectParameters
self.main_model_part = KratosMultiphysics.ModelPart(
self.ProjectParameters["problem_data"]
["model_part_name"].GetString())
self.main_model_part.ProcessInfo.SetValue(
KratosMultiphysics.DOMAIN_SIZE,
self.ProjectParameters["problem_data"]["domain_size"].GetInt())
self.Model = {
self.ProjectParameters["problem_data"]["model_part_name"].GetString(
):
self.main_model_part
}
self.problem_type = self.ProjectParameters["problem_data"][
"problem_type"].GetString()
self.solve_problem = self.ProjectParameters["problem_data"][
"solve_problem"].GetBool()
if (self.problem_type == "fluid"
and missing_external_fluid_dependencies == False):
## Solver construction
import python_solvers_wrapper_fluid as fluid_wrapper
self.solver = fluid_wrapper.CreateSolver(self.main_model_part,
self.ProjectParameters)
elif (self.problem_type == "solid"
and missing_external_solid_dependencies == False):
# Construct the solver (main setting methods are located in the solver_module)
solver_module = __import__(
self.ProjectParameters["solver_settings"]
["solver_type"].GetString())
self.solver = solver_module.CreateSolver(
self.main_model_part,
self.ProjectParameters["solver_settings"])
else:
raise NameError(
'Problem type not defined or failing in the import')
# Add variables (always before importing the model part) (it must be integrated in the ImportModelPart)
# If we integrate it in the model part we cannot use combined solvers
self.solver.AddVariables()
self.main_model_part.AddNodalSolutionStepVariable(
KratosMultiphysics.NODAL_H)
self.main_model_part.AddNodalSolutionStepVariable(
KratosMultiphysics.NODAL_AREA)
# Read model_part (note: the buffer_size is set here) (restart can be read here)
self.solver.ImportModelPart()
# Add dofs (always after importing the model part) (it must be integrated in the ImportModelPart)
# If we integrate it in the model part we cannot use combined solvers
self.solver.AddDofs()
# ### Output settings start ####
self.problem_path = os.getcwd()
self.problem_name = self.ProjectParameters["problem_data"][
"problem_name"].GetString()
# ### Output settings start ####
self.output_post = ProjectParameters.Has("output_configuration")
if (self.output_post == True):
from gid_output_process import GiDOutputProcess
output_settings = ProjectParameters["output_configuration"]
self.gid_output = GiDOutputProcess(
self.solver.GetComputingModelPart(), self.problem_name,
output_settings)
self.gid_output.ExecuteInitialize()
# Sets strategies, builders, linear solvers, schemes and solving info, and fills the buffer
self.solver.Initialize()
self.solver.SetEchoLevel(0) # Avoid to print anything
if self.problem_type == "fluid":
# Build sub_model_parts or submeshes (rearrange parts for the application of custom processes)
# #Get the list of the submodel part in the object Model
for i in range(self.ProjectParameters["solver_settings"]
["skin_parts"].size()):
skin_part_name = self.ProjectParameters["solver_settings"][
"skin_parts"][i].GetString()
self.Model.update({
skin_part_name:
self.main_model_part.GetSubModelPart(skin_part_name)
})
## Get the list of the initial conditions submodel parts in the object Model
for i in range(
self.ProjectParameters["initial_conditions_process_list"].
size()):
initial_cond_part_name = self.ProjectParameters[
"initial_conditions_process_list"][i]["Parameters"][
"model_part_name"].GetString()
self.Model.update({
initial_cond_part_name:
self.main_model_part.GetSubModelPart(
initial_cond_part_name)
})
## Get the gravity submodel part in the object Model
for i in range(self.ProjectParameters["gravity"].size()):
gravity_part_name = self.ProjectParameters["gravity"][i][
"Parameters"]["model_part_name"].GetString()
self.Model.update({
gravity_part_name:
self.main_model_part.GetSubModelPart(gravity_part_name)
})
elif self.problem_type == "solid":
# Build sub_model_parts or submeshes (rearrange parts for the application of custom processes)
# #Get the list of the submodel part in the object Model
for i in range(self.ProjectParameters["solver_settings"]
["processes_sub_model_part_list"].size()):
part_name = self.ProjectParameters["solver_settings"][
"processes_sub_model_part_list"][i].GetString()
self.Model.update({
part_name:
self.main_model_part.GetSubModelPart(part_name)
})
## Remeshing processes construction
if (self.ProjectParameters.Has("initial_remeshing_process") == True):
remeshing_processes = process_factory.KratosProcessFactory(
self.Model).ConstructListOfProcesses(
self.ProjectParameters["initial_remeshing_process"])
if (ProjectParameters.Has("list_other_processes") == True):
remeshing_processes += process_factory.KratosProcessFactory(
self.Model).ConstructListOfProcesses(
self.ProjectParameters["list_other_processes"])
## Remeshing processes initialization
print("STARTING ADAPTATIVE LOOP")
if (self.ProjectParameters.Has("adaptative_loop") == True):
adaptative_loop = ProjectParameters["adaptative_loop"].GetInt()
else:
adaptative_loop = 1
for n in range(adaptative_loop):
print("ADAPTATIVE INTERATION: ", n + 1)
for process in reversed(remeshing_processes):
process.ExecuteInitialize()
# Obtain the list of the processes to be applied
if self.problem_type == "fluid":
self.list_of_processes = process_factory.KratosProcessFactory(
self.Model).ConstructListOfProcesses(
self.ProjectParameters["gravity"])
self.list_of_processes += process_factory.KratosProcessFactory(
self.Model).ConstructListOfProcesses(
self.ProjectParameters["initial_conditions_process_list"])
self.list_of_processes += process_factory.KratosProcessFactory(
self.Model).ConstructListOfProcesses(
self.ProjectParameters["boundary_conditions_process_list"])
elif self.problem_type == "solid":
self.list_of_processes = process_factory.KratosProcessFactory(
self.Model).ConstructListOfProcesses(
self.ProjectParameters["constraints_process_list"])
self.list_of_processes += process_factory.KratosProcessFactory(
self.Model).ConstructListOfProcesses(
self.ProjectParameters["loads_process_list"])
if (self.ProjectParameters.Has("list_other_processes") == True):
self.list_of_processes += process_factory.KratosProcessFactory(
self.Model).ConstructListOfProcesses(
self.ProjectParameters["list_other_processes"])
if (self.ProjectParameters.Has("json_check_process") == True):
self.list_of_processes += process_factory.KratosProcessFactory(
self.Model).ConstructListOfProcesses(
self.ProjectParameters["json_check_process"])
if (self.ProjectParameters.Has("json_output_process") == True):
self.list_of_processes += process_factory.KratosProcessFactory(
self.Model).ConstructListOfProcesses(
self.ProjectParameters["json_output_process"])
if (self.ProjectParameters.Has("compare_two_files_check_process") ==
True):
self.list_of_processes += process_factory.KratosProcessFactory(
self.Model).ConstructListOfProcesses(
self.ProjectParameters["compare_two_files_check_process"])
if (self.ProjectParameters.Has("recursive_remeshing_process") == True):
self.list_of_processes += process_factory.KratosProcessFactory(
self.Model).ConstructListOfProcesses(
self.ProjectParameters["recursive_remeshing_process"])
for process in self.list_of_processes:
process.ExecuteInitialize()
# ### START SOLUTION ####
self.computing_model_part = self.solver.GetComputingModelPart()
if (self.output_post == True):
self.gid_output.ExecuteBeforeSolutionLoop()
def Solve(self):
if self.solve_problem == True:
for process in self.list_of_processes:
process.ExecuteBeforeSolutionLoop()
# #Stepping and time settings (get from process info or solving info)
# Delta time
delta_time = self.ProjectParameters["problem_data"][
"time_step"].GetDouble()
# Start step
self.main_model_part.ProcessInfo[KratosMultiphysics.TIME_STEPS] = 0
# Start time
time = self.ProjectParameters["problem_data"][
"start_time"].GetDouble()
# End time
end_time = self.ProjectParameters["problem_data"][
"end_time"].GetDouble()
step = 0
if self.problem_type == "fluid":
init_step = 3
elif self.problem_type == "solid":
init_step = 1
# Solving the problem (time integration)
while (time <= end_time):
time = time + delta_time
self.main_model_part.ProcessInfo[
KratosMultiphysics.TIME_STEPS] += 1
self.main_model_part.CloneTimeStep(time)
step = step + 1
if (step >= init_step):
for process in self.list_of_processes:
process.ExecuteInitializeSolutionStep()
if (self.main_model_part.Is(
KratosMultiphysics.MODIFIED) == True):
# WE INITIALIZE THE SOLVER
self.solver.Initialize()
# WE RECOMPUTE THE PROCESSES AGAIN
## Processes initialization
for process in self.list_of_processes:
process.ExecuteInitialize()
## Processes before the loop
for process in self.list_of_processes:
process.ExecuteBeforeSolutionLoop()
## Processes of initialize the solution step
for process in self.list_of_processes:
process.ExecuteInitializeSolutionStep()
if (self.output_post == True):
self.gid_output.ExecuteInitializeSolutionStep()
self.solver.Clear()
self.solver.Solve()
if (self.output_post == True):
self.gid_output.ExecuteFinalizeSolutionStep()
for process in self.list_of_processes:
process.ExecuteFinalizeSolutionStep()
for process in self.list_of_processes:
process.ExecuteBeforeOutputStep()
if (self.output_post == True):
if self.gid_output.IsOutputStep():
self.gid_output.PrintOutput()
for process in self.list_of_processes:
process.ExecuteAfterOutputStep()
if (self.output_post == True):
self.gid_output.ExecuteFinalize()
for process in self.list_of_processes:
process.ExecuteFinalize()
class ManufacturedSolutionProblem:
def __init__(self, input_file_name, settings_file_name, problem_type):
self.problem_type = problem_type
self.input_file_name = input_file_name
self.settings_file_name = settings_file_name
def SetFluidProblem(self):
## Parse the ProjectParameters
parameter_file = open(self.settings_file_name, 'r')
self.ProjectParameters = Parameters(parameter_file.read())
## Set the current mesh case problem info
if (self.problem_type == "Manufactured solution"):
self.ProjectParameters["problem_data"]["problem_name"].SetString(
self.input_file_name + "_manufactured")
else:
self.ProjectParameters["problem_data"]["problem_name"].SetString(
self.input_file_name)
self.ProjectParameters["solver_settings"]["model_import_settings"][
"input_filename"].SetString(self.input_file_name)
## Fluid model part definition
self.main_model_part = ModelPart(self.ProjectParameters["problem_data"]
["model_part_name"].GetString())
self.main_model_part.ProcessInfo.SetValue(
DOMAIN_SIZE,
self.ProjectParameters["problem_data"]["domain_size"].GetInt())
###TODO replace this "model" for real one once available
Model = {
self.ProjectParameters["problem_data"]["model_part_name"].GetString(
):
self.main_model_part
}
## Solver construction
import python_solvers_wrapper_fluid
self.solver = python_solvers_wrapper_fluid.CreateSolver(
self.main_model_part, self.ProjectParameters)
self.solver.AddVariables()
## Read the model - note that SetBufferSize is done here
self.solver.ImportModelPart()
## Add AddDofs
self.solver.AddDofs()
## Initialize GiD I/O
from gid_output_process import GiDOutputProcess
self.gid_output = GiDOutputProcess(
self.solver.GetComputingModelPart(),
self.ProjectParameters["problem_data"]["problem_name"].GetString(),
self.ProjectParameters["output_configuration"])
self.gid_output.ExecuteInitialize()
## Get the list of the skin submodel parts in the object Model
for i in range(self.ProjectParameters["solver_settings"]
["skin_parts"].size()):
skin_part_name = self.ProjectParameters["solver_settings"][
"skin_parts"][i].GetString()
Model.update({
skin_part_name:
self.main_model_part.GetSubModelPart(skin_part_name)
})
for i in range(self.ProjectParameters["solver_settings"]
["no_skin_parts"].size()):
no_skin_part_name = self.ProjectParameters["solver_settings"][
"no_skin_parts"][i].GetString()
Model.update({
no_skin_part_name:
self.main_model_part.GetSubModelPart(no_skin_part_name)
})
## Solver initialization
self.solver.Initialize()
## Compute and set the nodal area
self.SetNodalArea()
## Set the distance to 1 to have full fluid elements
if (self.ProjectParameters["solver_settings"]
["solver_type"].GetString() == "Embedded"):
for node in self.main_model_part.Nodes:
node.SetSolutionStepValue(DISTANCE, 0, 1.0)
## Fix the pressure in one node (bottom left corner)
for node in self.main_model_part.Nodes:
if ((node.X < 0.001) and (node.Y < 0.001)):
node.Fix(PRESSURE)
node.SetSolutionStepValue(PRESSURE, 0, 0.0)
def SolveFluidProblem(self):
## Stepping and time settings
Dt = self.ProjectParameters["problem_data"]["time_step"].GetDouble()
end_time = self.ProjectParameters["problem_data"][
"end_time"].GetDouble()
time = 0.0
step = 0
out = 0.0
self.gid_output.ExecuteBeforeSolutionLoop()
while (time <= end_time):
time = time + Dt
step = step + 1
self.main_model_part.CloneTimeStep(time)
print("STEP = ", step)
print("TIME = ", time)
self.gid_output.ExecuteInitializeSolutionStep()
if (self.problem_type == "Manufactured solution"):
# Fix the manufactured solution values (only for visualization purposes)
self.SetManufacturedSolutionValues(fix=True,
set_on_boundary=False)
else:
# Set the manufactured solution source terms
self.SetManufacturedSolutionValues(fix=True,
set_on_boundary=True)
self.SetManufacturedSolutionSourceValues()
if (step < 3):
self.SetManufacturedSolutionValues(
False
) # Set the analytical solution in the two first steps
else:
if (self.problem_type != "Manufactured solution"):
self.solver.Solve()
self.gid_output.ExecuteFinalizeSolutionStep()
if self.gid_output.IsOutputStep():
self.gid_output.PrintOutput()
out = out + Dt
self.gid_output.ExecuteFinalize()
def SetManufacturedSolutionValues(self, fix=True, set_on_boundary=False):
## Set the analytical solution for the manufactured solution computation
time = self.main_model_part.ProcessInfo[TIME]
if (set_on_boundary == False):
for node in self.main_model_part.Nodes:
x_vel = self.ComputeNodalVelocityXManufacturedSolution(
node, time)
y_vel = self.ComputeNodalVelocityYManufacturedSolution(
node, time)
press = self.ComputeNodalPressureManufacturedSolution(node)
if (fix == True):
node.Fix(VELOCITY_X)
node.Fix(VELOCITY_Y)
node.Fix(PRESSURE)
node.SetSolutionStepValue(VELOCITY_X, 0, x_vel)
node.SetSolutionStepValue(VELOCITY_Y, 0, y_vel)
node.SetSolutionStepValue(PRESSURE, 0, press)
else:
for node in self.main_model_part.GetSubModelPart(
"Inlet2D_Contour").Nodes:
x_vel = self.ComputeNodalVelocityXManufacturedSolution(
node, time)
y_vel = self.ComputeNodalVelocityYManufacturedSolution(
node, time)
if (fix == True):
node.Fix(VELOCITY_X)
node.Fix(VELOCITY_Y)
node.SetSolutionStepValue(VELOCITY_X, 0, x_vel)
node.SetSolutionStepValue(VELOCITY_Y, 0, y_vel)
def SetNodalArea(self):
# Compute nodal area
for element in self.main_model_part.Elements:
x = []
y = []
for node in element.GetNodes():
x.append(node.X)
y.append(node.Y)
Area = 0.5 * (
(x[1] * y[2] - x[2] * y[1]) + (x[2] * y[0] - x[0] * y[2]) +
(x[0] * y[1] - x[1] * y[0])) # Element area (Jacobian/2)
# print("Element "+str(element.Id)+" area: "+str(Area))
for node in element.GetNodes():
aux = node.GetSolutionStepValue(
NODAL_AREA) # Current nodal area (from other elements)
aux += Area / 3.0 # Accumulate the current element nodal area
node.SetSolutionStepValue(NODAL_AREA, 0, aux)
node.SetValue(NODAL_AREA, aux)
## Check nodal area computation (squared shaped domain of 1x1 m)
AreaTotal = 0.0
for node in self.main_model_part.Nodes:
# print("Node id "+str(node.Id)+" nodal area: "+str(node.GetValue(NODAL_AREA)))
AreaTotal += node.GetValue(NODAL_AREA)
if (abs(1.0 - AreaTotal) > 1e-5):
print("Obtained total area: " + str(AreaTotal))
raise Exception("Error in NODAL_AREA computation.")
def SetManufacturedSolutionSourceValues(self):
## Set the body force as source term
time = self.main_model_part.ProcessInfo[TIME]
for node in self.main_model_part.Nodes:
rho = node.GetSolutionStepValue(DENSITY)
# nodal_area = node.GetValue(NODAL_AREA)
# If VMS2D element is used, set mu as the Kinematic viscosity
if (self.ProjectParameters["solver_settings"]
["solver_type"].GetString() == "Embedded"):
mu = node.GetSolutionStepValue(DYNAMIC_VISCOSITY)
elif (self.ProjectParameters["solver_settings"]
["solver_type"].GetString() == "Monolithic"):
mu = rho * node.GetSolutionStepValue(VISCOSITY)
# Trigonometric transient field obtained with by hand derivation
# rhofy = -rho*pi*cos(pi*node.X)*sin(pi*node.Y)*cos(pi*time) - 2*mu*pi*pi*cos(pi*node.X)*sin(pi*node.Y)*sin(pi*time) + rho*pi*(sin(pi*time)**2)*sin(pi*node.Y)*cos(pi*node.Y)
# rhofx = rho*pi*sin(pi*node.X)*cos(pi*node.Y)*cos(pi*time) + 2*mu*pi*pi*sin(pi*node.X)*cos(pi*node.Y)*sin(pi*time) + rho*pi*(sin(pi*time)**2)*sin(pi*node.X)*cos(pi*node.X)
rhofx = -rho * pi * sin(pi * node.X) * cos(pi * node.Y) * sin(
pi * time) + 2 * mu * pi * pi * sin(pi * node.X) * cos(
pi * node.Y) * cos(pi * time) + rho * pi * (cos(
pi * time)**2) * sin(pi * node.X) * cos(pi * node.X)
rhofy = rho * pi * cos(pi * node.X) * sin(pi * node.Y) * sin(
pi * time) - 2 * mu * pi * pi * cos(pi * node.X) * sin(
pi * node.Y) * cos(pi * time) + rho * pi * (cos(
pi * time)**2) * sin(pi * node.Y) * cos(pi * node.Y)
# Trigonometric transient field obtained with symbolic generation
# rhofx = 2*pi**2*mu*sin(pi*node.X)*sin(pi*time)*cos(pi*node.Y) + rho*(pi*sin(pi*node.X)*sin(pi*node.Y)**2*sin(pi*time)**2*cos(pi*node.X) + pi*sin(pi*node.X)*sin(pi*time)**2*cos(pi*node.X)*cos(pi*node.Y)**2) + pi*rho*sin(pi*node.X)*cos(pi*node.Y)*cos(pi*time)
# rhofy = -2*pi**2*mu*sin(pi*node.Y)*sin(pi*time)*cos(pi*node.X) + rho*(pi*sin(pi*node.X)**2*sin(pi*node.Y)*sin(pi*time)**2*cos(pi*node.Y) + pi*sin(pi*node.Y)*sin(pi*time)**2*cos(pi*node.X)**2*cos(pi*node.Y)) - pi*rho*sin(pi*node.Y)*cos(pi*node.X)*cos(pi*time)
# print("Node id. ",node.Id," by hand: ",rhofx_an," ",rhofy_an," sym: ",rhofx," ",rhofy)
# Non-linear transient field
# rhofx = rho*pi*(node.X**2)*node.Y*cos(pi*time) - 2*mu*node.Y*sin(pi*time) + rho*(node.X**3)*(node.Y**2)*((sin(pi*time))**2)
# rhofy = -rho*pi*node.X*(node.Y**2)*cos(pi*time) + 2*mu*node.X*sin(pi*time) + rho*(node.X**2)*(node.Y**3)*((sin(pi*time))**2)
# Non-linear stationary field
# rhofx = -2*mu*node.Y + rho*node.X**3*node.Y**2
# rhofy = 2*mu*node.X + rho*node.X**2*node.Y**3
node.SetSolutionStepValue(
BODY_FORCE_X, 0,
rhofx / rho) # Set the x-component body force field
node.SetSolutionStepValue(
BODY_FORCE_Y, 0,
rhofy / rho) # Set the y-component body force field
def ComputeVelocityErrorNorm(self):
err_v = 0
for node in self.main_model_part.Nodes:
weight = node.GetValue(NODAL_AREA)
vel_x = node.GetSolutionStepValue(VELOCITY_X)
vel_y = node.GetSolutionStepValue(VELOCITY_Y)
end_time = self.main_model_part.ProcessInfo[TIME]
analytical_vel_x = self.ComputeNodalVelocityXManufacturedSolution(
node, end_time)
analytical_vel_y = self.ComputeNodalVelocityYManufacturedSolution(
node, end_time)
err_x = analytical_vel_x - vel_x
err_y = analytical_vel_y - vel_y
err_node = err_x**2 + err_y**2
err_v += weight * err_node
return sqrt(
err_v
) # Note, there is no need of dividing by the total area (sum of weights) since it is 1
def ComputePressureErrorNorm(self):
err_p = 0
for node in self.main_model_part.Nodes:
weight = node.GetValue(NODAL_AREA)
pres = node.GetSolutionStepValue(PRESSURE)
analytical_pres = self.ComputeNodalPressureManufacturedSolution(
node)
err_p += weight * (analytical_pres - pres)**2
return sqrt(
err_p
) # Note, there is no need of dividing by the total area (sum of weights) since it is 1
def ComputeNodalDensityManufacturedSolution(self, node):
# return 1.0 + 0.1*math.sin(0.75*math.pi*node.X) + 0.15*math.cos(1.0*math.pi*node.Y) + 0.08*math.cos(1.25*math.pi*node.X*node.Y)
return 1.0
# def ComputeNodalVelocityXManufacturedSolution(self, node):
def ComputeNodalVelocityXManufacturedSolution(self, node, time):
# return sin(pi*node.X)*cos(pi*node.Y)*sin(pi*time) # Time dependent solution
return sin(pi * node.X) * cos(pi * node.Y) * cos(
pi * time) # Time dependent solution
# return node.X**2*node.Y*sin(pi*time) # Non-linear transient field
# return node.X**2*node.Y # Non-linear stationary field
# def ComputeNodalVelocityYManufacturedSolution(self, node):
def ComputeNodalVelocityYManufacturedSolution(self, node, time):
# return -cos(pi*node.X)*sin(pi*node.Y)*sin(pi*time) # Time dependent solution
return -cos(pi * node.X) * sin(pi * node.Y) * cos(
pi * time) # Time dependent solution
# return -node.X*node.Y**2*sin(pi*time) # Non-linear transient field
# return -node.X*node.Y**2 # Non-linear stationary field
def ComputeNodalPressureManufacturedSolution(self, node):
# return 100000.0 - 30000.0*math.cos(1.0*math.pi*node.X) + 20000.0*math.sin(1.25*math.pi*node.Y) - 25000.0*math.sin(0.75*math.pi*node.X*node.Y)
return 0.0
class TestDoubleCurvatureIntegration(KratosUnittest.TestCase):
def setUp(self):
pass
def __base_test_integration(self, input_filename, num_nodes):
KratosMultiphysics.Logger.GetDefaultOutput().SetSeverity(
KratosMultiphysics.Logger.Severity.WARNING)
self.model = KratosMultiphysics.Model()
self.main_model_part = self.model.CreateModelPart("Structure", 2)
self.main_model_part.AddNodalSolutionStepVariable(
KratosMultiphysics.DISPLACEMENT)
self.main_model_part.AddNodalSolutionStepVariable(
KratosMultiphysics.VELOCITY)
self.main_model_part.AddNodalSolutionStepVariable(
KratosMultiphysics.ACCELERATION)
self.main_model_part.AddNodalSolutionStepVariable(
KratosMultiphysics.REACTION)
self.main_model_part.AddNodalSolutionStepVariable(
KratosMultiphysics.NORMAL)
self.main_model_part.AddNodalSolutionStepVariable(
ContactStructuralMechanicsApplication.
LAGRANGE_MULTIPLIER_CONTACT_PRESSURE)
self.main_model_part.AddNodalSolutionStepVariable(
ContactStructuralMechanicsApplication.WEIGHTED_GAP)
self.main_model_part.AddNodalSolutionStepVariable(
KratosMultiphysics.NODAL_H)
KratosMultiphysics.ModelPartIO(input_filename).ReadModelPart(
self.main_model_part)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_X, KratosMultiphysics.REACTION_X,
self.main_model_part)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_Y, KratosMultiphysics.REACTION_Y,
self.main_model_part)
KratosMultiphysics.VariableUtils().AddDof(
KratosMultiphysics.DISPLACEMENT_Z, KratosMultiphysics.REACTION_Z,
self.main_model_part)
KratosMultiphysics.VariableUtils().AddDof(
ContactStructuralMechanicsApplication.
LAGRANGE_MULTIPLIER_CONTACT_PRESSURE,
ContactStructuralMechanicsApplication.WEIGHTED_GAP,
self.main_model_part)
if (self.main_model_part.HasSubModelPart("Contact")):
interface_model_part = self.main_model_part.GetSubModelPart(
"Contact")
else:
interface_model_part = self.main_model_part.CreateSubModelPart(
"Contact")
self.contact_model_part = self.main_model_part.GetSubModelPart(
"DISPLACEMENT_Displacement_Auto2")
for node in self.contact_model_part.Nodes:
node.Set(KratosMultiphysics.SLAVE, False)
del (node)
model_part_slave = self.main_model_part.GetSubModelPart(
"Parts_Parts_Auto1")
for node in model_part_slave.Nodes:
node.Set(KratosMultiphysics.SLAVE, True)
del (node)
for prop in self.main_model_part.GetProperties():
prop[ContactStructuralMechanicsApplication.
INTEGRATION_ORDER_CONTACT] = 3
self.main_model_part.ProcessInfo[
ContactStructuralMechanicsApplication.ACTIVE_CHECK_FACTOR] = 3.0e-1
for node in self.contact_model_part.Nodes:
node.Set(KratosMultiphysics.INTERFACE, True)
Preprocess = ContactStructuralMechanicsApplication.InterfacePreprocessCondition(
self.main_model_part)
interface_parameters = KratosMultiphysics.Parameters(
"""{"simplify_geometry": false}""")
Preprocess.GenerateInterfacePart3D(self.contact_model_part,
interface_parameters)
# We copy the conditions to the ContactSubModelPart
for cond in self.contact_model_part.Conditions:
interface_model_part.AddCondition(cond)
del (cond)
for node in self.contact_model_part.Nodes:
interface_model_part.AddNode(node, 0)
del (node)
# We initialize the conditions
alm_init_var = ContactStructuralMechanicsApplication.ALMFastInit(
self.contact_model_part)
alm_init_var.Execute()
search_parameters = KratosMultiphysics.Parameters("""
{
"search_factor" : 3.5,
"allocation_size" : 1000,
"check_gap" : "NoCheck",
"type_search" : "InRadius"
}
""")
if (num_nodes == 3):
contact_search = ContactStructuralMechanicsApplication.TreeContactSearch3D3N(
self.main_model_part, search_parameters)
else:
contact_search = ContactStructuralMechanicsApplication.TreeContactSearch3D4N(
self.main_model_part, search_parameters)
# We initialize the search utility
contact_search.CreatePointListMortar()
contact_search.InitializeMortarConditions()
contact_search.UpdateMortarConditions()
if (num_nodes == 3):
## DEBUG
#print(self.main_model_part)
#self.__post_process()
self.exact_integration = KratosMultiphysics.ExactMortarIntegrationUtility3D3N(
3)
else:
## DEBUG
#print(self.main_model_part)
#self.__post_process()
self.exact_integration = KratosMultiphysics.ExactMortarIntegrationUtility3D4N(
3)
def _double_curvature_tests(self, input_filename, num_nodes,
list_of_border_cond):
self.__base_test_integration(input_filename, num_nodes)
#print("Solution obtained")
tolerance = 5.0e-3
for cond in self.contact_model_part.Conditions:
if cond.Is(KratosMultiphysics.SLAVE):
to_test = (cond.Id in list_of_border_cond)
if (to_test == False):
area = self.exact_integration.TestGetExactAreaIntegration(
self.main_model_part, cond)
condition_area = cond.GetGeometry().Area()
check_value = abs((area - condition_area) / condition_area)
if (check_value > tolerance):
print(cond.Id, "\t", area, "\t", condition_area, "\t",
self.__sci_str(check_value))
else:
self.assertLess(check_value, tolerance)
def _moving_nodes_tests(self, input_filename, num_nodes):
self.__base_test_integration(input_filename, num_nodes)
for iter in range(1):
delta_disp = 1.0e-6
for node in self.main_model_part.GetSubModelPart(
"GroupPositiveX").Nodes:
node.X += delta_disp
del (node)
for node in self.main_model_part.GetSubModelPart(
"GroupPositiveY").Nodes:
node.Y += delta_disp
del (node)
for node in self.main_model_part.GetSubModelPart(
"GroupNegativeX").Nodes:
node.X -= delta_disp
del (node)
for node in self.main_model_part.GetSubModelPart(
"GroupNegativeY").Nodes:
node.Y -= delta_disp
del (node)
#print("Solution obtained")
tolerance = 5.0e-5
for cond in self.contact_model_part.Conditions:
if cond.Is(KratosMultiphysics.SLAVE):
area = self.exact_integration.TestGetExactAreaIntegration(
self.contact_model_part, cond)
condition_area = cond.GetGeometry().Area()
check_value = abs((area - condition_area) / condition_area)
if (check_value > tolerance):
print(cond.Id, "\t", area, "\t", condition_area, "\t",
self.__sci_str(check_value))
else:
self.assertLess(check_value, tolerance)
def test_double_curvature_integration_triangle(self):
input_filename = os.path.dirname(
os.path.realpath(__file__)
) + "/integration_tests/test_double_curvature_integration_triangle"
# These conditions are in the border, and can not be integrated 100% accurate
list_of_border_cond = [
1262, 1263, 1264, 1265, 1269, 1270, 1273, 1275, 1278, 1282, 1284,
1285, 1286, 1288, 1290, 1291, 1292, 1294, 1295, 1297, 1298, 1302,
1303, 1305, 1306, 1307, 1310, 1313, 1314, 1318, 1319, 1320, 1323,
1325, 1327, 1328, 1329, 1331, 1336, 1337, 1338, 1340, 1341, 1342,
1343, 1344, 1346, 1347, 1348, 1349, 1350, 1353, 1355, 1357, 1359,
1360, 1366, 1367, 1368, 1369, 1370, 1377, 1378, 1379, 1381, 1382,
1384, 1385, 1387, 1393, 1394, 1395, 1399, 1400, 1406, 1410, 1411,
1412, 1414, 1415, 1418, 1419, 1420, 1424, 1427, 1429, 1431, 1436,
1438, 1444, 1446, 1447, 1448, 1449, 1459, 1462, 1463, 1465, 1467,
1468, 1474, 1477, 1479, 1485, 1491, 1493, 1507, 1515, 1517, 1531,
1537, 1539, 1547, 1549, 1553, 1563, 1569, 1575, 1623, 1640, 1644,
1654, 1656, 1663, 1667, 1675, 1685, 1687, 1693, 1697, 1703, 1707,
1713, 1715, 1717, 1719, 1721, 1723, 1725
]
self._double_curvature_tests(input_filename, 3, list_of_border_cond)
def test_double_curvature_integration_quad(self):
input_filename = os.path.dirname(
os.path.realpath(__file__)
) + "/integration_tests/test_double_curvature_integration_quadrilateral"
# These conditions are in the border, and can not be integrated 100% accurate
list_of_border_cond = [
916, 917, 919, 920, 923, 925, 927, 929, 933, 934, 938, 940, 941,
944, 945, 946, 949, 951, 954, 955, 962, 963, 965, 966, 967, 968,
969, 970, 971, 973, 974, 977, 978, 979, 980, 981, 982, 983, 984,
985, 986, 988, 989, 990, 995, 996, 1000, 1003, 1005, 1007, 1008,
1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021,
1022, 1023, 1024, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048,
1049, 1050, 1051, 1052, 1053, 1054, 1055, 1058, 1060, 1064, 1066,
1069, 1070, 1071, 1072, 1073, 1074, 1075, 1076
]
self._double_curvature_tests(input_filename, 4, list_of_border_cond)
def test_moving_mesh_integration_quad(self):
input_filename = os.path.dirname(os.path.realpath(
__file__)) + "/integration_tests/quadrilaterals_moving_nodes"
self._moving_nodes_tests(input_filename, 4)
def test_integration_quad_non_matching(self):
input_filename = os.path.dirname(os.path.realpath(
__file__)) + "/integration_tests/quadrilaterals_non_matching"
list_of_border_cond = []
self._double_curvature_tests(input_filename, 4, list_of_border_cond)
def __post_process(self):
from gid_output_process import GiDOutputProcess
self.gid_output = GiDOutputProcess(
self.main_model_part, "gid_output",
KratosMultiphysics.Parameters("""
{
"result_file_configuration" : {
"gidpost_flags": {
"GiDPostMode": "GiD_PostBinary",
"WriteDeformedMeshFlag": "WriteUndeformed",
"WriteConditionsFlag": "WriteConditionsOnly",
"MultiFileFlag": "SingleFile"
},
"nodal_results" : ["NORMAL"],
"nodal_nonhistorical_results": [],
"nodal_flags_results": ["ACTIVE","SLAVE"]
}
}
"""))
self.gid_output.ExecuteInitialize()
self.gid_output.ExecuteBeforeSolutionLoop()
self.gid_output.ExecuteInitializeSolutionStep()
self.gid_output.PrintOutput()
self.gid_output.ExecuteFinalizeSolutionStep()
self.gid_output.ExecuteFinalize()
def __sci_str(self, x):
from decimal import Decimal
s = 10 * Decimal(str(x))
s = ('{:.' + str(len(s.normalize().as_tuple().digits) - 1) +
'E}').format(s)
s = s.replace('E+', 'D0')
s = s.replace('E-', 'D0-')
s = s.replace('.', '')
if s.startswith('-'):
return '-.' + s[1:]
else:
return '.' + s
class FluidDynamicsAnalysis(object):
'''Main script for fluid dynamics simulations using the navier_stokes family of python solvers.'''
def __init__(self, parameters):
super(FluidDynamicsAnalysis, self).__init__()
self.project_parameters = parameters
self.echo_level = self.project_parameters["problem_data"][
"echo_level"].GetInt()
self.parallel_type = self.project_parameters["problem_data"][
"parallel_type"].GetString()
# If this is an MPI run, load the distributed memory modules
if (self.parallel_type == "MPI"):
from KratosMultiphysics.mpi import mpi
import KratosMultiphysics.MetisApplication
import KratosMultiphysics.TrilinosApplication
self.is_printing_rank = (mpi.rank == 0)
else:
self.is_printing_rank = True
def SetUpModel(self):
'''Initialize the model part for the problem and other general model data.'''
model_part_name = self.project_parameters["problem_data"][
"model_part_name"].GetString()
self.main_model_part = Kratos.ModelPart(model_part_name)
domain_size = self.project_parameters["problem_data"][
"domain_size"].GetInt()
self.main_model_part.ProcessInfo.SetValue(Kratos.DOMAIN_SIZE,
domain_size)
## Solver construction
import python_solvers_wrapper_fluid
self.solver = python_solvers_wrapper_fluid.CreateSolver(
self.main_model_part, self.project_parameters)
self._SetUpRestart()
if self.load_restart:
self.restart_utility.LoadRestart()
else:
self.solver.AddVariables()
self.solver.ImportModelPart()
self.solver.AddDofs()
# Fill a Model instance using input
self.model = Kratos.Model()
self.model.AddModelPart(self.main_model_part)
def SetUpAuxiliaryProcesses(self):
'''
Read the definition of initial and boundary conditions for the problem and initialize the processes that will manage them.
Also initialize any additional processes present in the problem (such as those used to calculate additional results).
'''
from process_factory import KratosProcessFactory
factory = KratosProcessFactory(self.model)
# The list of processes will contain a list with each individual process already constructed (boundary conditions, initial conditions and gravity)
# Note 1: gravity is constructed first. Outlet process might need its information.
# Note 2: initial conditions are constructed before BCs. Otherwise, they may overwrite the BCs information.
self.simulation_processes = factory.ConstructListOfProcesses(
self.project_parameters["gravity"])
self.simulation_processes += factory.ConstructListOfProcesses(
self.project_parameters["initial_conditions_process_list"])
self.simulation_processes += factory.ConstructListOfProcesses(
self.project_parameters["boundary_conditions_process_list"])
self.simulation_processes += factory.ConstructListOfProcesses(
self.project_parameters["auxiliar_process_list"])
def SetUpAnalysis(self):
'''
Initialize the Python solver and its auxiliary tools and processes.
This function should prepare everything so that the simulation
can start immediately after exiting it.
'''
for process in self.simulation_processes:
process.ExecuteInitialize()
self.solver.Initialize()
#TODO this should be generic
# initialize GiD I/O
self._SetUpGiDOutput()
## Writing the full ProjectParameters file before solving
if self.is_printing_rank and self.echo_level > 1:
with open("ProjectParametersOutput.json",
'w') as parameter_output_file:
parameter_output_file.write(
self.project_parameters.PrettyPrintJsonString())
## Stepping and time settings
self.end_time = self.project_parameters["problem_data"][
"end_time"].GetDouble()
if self.main_model_part.ProcessInfo[Kratos.IS_RESTARTED]:
self.time = self.main_model_part.ProcessInfo[Kratos.TIME]
self.step = self.main_model_part.ProcessInfo[Kratos.STEP]
else:
self.time = 0.0
self.step = 0
for process in self.simulation_processes:
process.ExecuteBeforeSolutionLoop()
if self.have_output:
self.output.ExecuteBeforeSolutionLoop()
def _SetUpGiDOutput(self):
'''Initialize self.output as a GiD output instance.'''
self.have_output = self.project_parameters.Has("output_configuration")
if self.have_output:
if self.parallel_type == "OpenMP":
from gid_output_process import GiDOutputProcess as OutputProcess
elif self.parallel_type == "MPI":
from gid_output_process_mpi import GiDOutputProcessMPI as OutputProcess
self.output = OutputProcess(
self.solver.GetComputingModelPart(),
self.project_parameters["problem_data"]
["problem_name"].GetString(),
self.project_parameters["output_configuration"])
self.output.ExecuteInitialize()
def _SetUpRestart(self):
"""Initialize self.restart_utility as a RestartUtility instance and check if we need to initialize the problem from a restart file."""
if self.project_parameters.Has("restart_settings"):
restart_settings = self.project_parameters["restart_settings"]
self.load_restart = restart_settings["load_restart"].GetBool()
self.save_restart = restart_settings["save_restart"].GetBool()
restart_settings.RemoveValue("load_restart")
restart_settings.RemoveValue("save_restart")
restart_settings.AddValue(
"input_filename",
self.project_parameters["problem_data"]["problem_name"])
restart_settings.AddValue(
"echo_level",
self.project_parameters["problem_data"]["echo_level"])
if self.parallel_type == "OpenMP":
from restart_utility import RestartUtility as Restart
elif self.parallel_type == "MPI":
from trilinos_restart_utility import TrilinosRestartUtility as Restart
self.restart_utility = Restart(
self.main_model_part,
self.project_parameters["restart_settings"])
else:
self.load_restart = False
self.save_restart = False
def _TimeBufferIsInitialized(self):
# We always have one extra old step (step 0, read from input)
return self.step + 1 >= self.solver.GetMinimumBufferSize()
def RunMainTemporalLoop(self):
'''The main solution loop.'''
while self.time <= self.end_time:
dt = self.solver.ComputeDeltaTime()
self.time = self.time + dt
self.step = self.step + 1
self.main_model_part.CloneTimeStep(self.time)
self.main_model_part.ProcessInfo[Kratos.STEP] = self.step
if self.is_printing_rank:
Kratos.Logger.PrintInfo("Fluid Dynamics Analysis", "STEP = ",
self.step)
Kratos.Logger.PrintInfo("Fluid Dynamics Analysis", "TIME = ",
self.time)
self.InitializeSolutionStep()
self.SolveSingleStep()
self.FinalizeSolutionStep()
def InitializeSolutionStep(self):
for process in self.simulation_processes:
process.ExecuteInitializeSolutionStep()
if self.have_output:
self.output.ExecuteInitializeSolutionStep()
if self._TimeBufferIsInitialized():
self.solver.InitializeSolutionStep()
def SolveSingleStep(self):
if self._TimeBufferIsInitialized():
self.solver.SolveSolutionStep()
def FinalizeSolutionStep(self):
if self._TimeBufferIsInitialized():
self.solver.FinalizeSolutionStep()
# shouldn't this go at the end of the iteration???
for process in self.simulation_processes:
process.ExecuteFinalizeSolutionStep()
if self.have_output:
self.output.ExecuteFinalizeSolutionStep()
if self.have_output and self.output.IsOutputStep():
for process in self.simulation_processes:
process.ExecuteBeforeOutputStep()
self.output.PrintOutput()
for process in self.simulation_processes:
process.ExecuteAfterOutputStep()
if self.save_restart:
self.restart_utility.SaveRestart()
def FinalizeAnalysis(self):
'''Finalize the simulation and close open files.'''
for process in self.simulation_processes:
process.ExecuteFinalize()
if self.have_output:
self.output.ExecuteFinalize()
def InitializeAnalysis(self):
'''Wrapper function comprising the definition of the model and the initialization of the problem.'''
self.SetUpModel()
self.SetUpAuxiliaryProcesses()
self.SetUpAnalysis()
def Run(self):
'''Wrapper function for the solution.'''
self.InitializeAnalysis()
self.RunMainTemporalLoop()
self.FinalizeAnalysis()
