Esempio n. 1
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    def move_posix(self, movetype):
        """Create symlinks/copies using POSIX shell command specified in metadata.  
        
        Parameters
        ----------
    	movetype : str
        	Type of file movement. Takes either `copy` or `symlink`. 

        Returns
        -------
        None
        """

        for source, destination in self.move_list:
            if movetype == 'copy':
                command = metadata.commands[self.osname]['makecopy'] % (
                    source, destination)
            elif movetype == 'symlink':
                command = metadata.commands[self.osname]['makelink'] % (
                    source, destination)

            process = subprocess.Popen(command,
                                       shell=True,
                                       stdout=subprocess.PIPE,
                                       stderr=subprocess.PIPE,
                                       universal_newlines=True)
            stdout, stderr = process.communicate()

            if process.returncode != 0:
                error_message = messages.crit_error_move_command % command
                error_message = error_message + format_traceback(stderr)
                raise CritError(error_message)
Esempio n. 2
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    def move_program_output(self, program_output, log_file=''):
        """Move program outputs.
        
        Notes
        -----
        Certain applications create program outputs that need to be moved to 
        appropriate logging files.
        
        Parameters
        ----------
        program_output : str
             Path of program output.
        log_file : str, optional
             Path of log file. Log file is only written if specified.
             Defaults to ``''`` (i.e., not written).
        """

        program_output = norm_path(program_output)

        try:
            with io.open(program_output,
                         'r',
                         encoding='utf-8',
                         errors='ignore') as f:
                out = f.read()
        except:
            error_message = messages.crit_error_no_program_output % (
                program_output, self.program)
            error_message = error_message + format_traceback()
            raise_from(CritError(error_message), None)

        if self.makelog:
            if not (metadata.makelog_started and os.path.isfile(self.makelog)):
                raise CritError(messages.crit_error_no_makelog % self.makelog)
            with io.open(self.makelog, 'a', encoding='utf-8',
                         errors='ignore') as f:
                print(out, file=f)

        if log_file:
            if program_output != log_file:
                shutil.copy2(program_output, log_file)
                os.remove(program_output)
        else:
            os.remove(program_output)

        return (out)
Esempio n. 3
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    def execute_command(self, command):
        """Execute shell command.
    
        Parameters
        ----------
        command : str
            Shell command to execute.
        
        Returns
        -------
        exit : tuple
            Tuple (exit code, error message) for shell command.
        """

        self.output = 'Executing command: `%s`' % command
        print(colored(self.output, metadata.color_in_process))

        try:
            if not self.shell:
                command = command.split()

            process = subprocess_fix.Popen(command,
                                           stdout=subprocess.PIPE,
                                           stderr=subprocess.PIPE,
                                           shell=self.shell,
                                           universal_newlines=True)
            process.wait()
            stdout, stderr = process.communicate()
            exit = (process.returncode, stderr)

            if stdout:
                self.output += '\n' + decode(stdout)
            if stderr:
                self.output += '\n' + decode(stderr)
                pass

            return (exit)
        except:
            error_message = messages.crit_error_bad_command % command
            error_message = error_message + format_traceback()
            raise_from(CritError(error_message), None)
Esempio n. 4
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    def get_paths(self):
        """Parse sources and destinations from line. 
                
        Returns
        -------
        None
        """

        try:
            self.line = self.line.split('|')
            self.line = [l.strip() for l in self.line]
            self.line = [l.strip('"\'') for l in self.line]
            self.destination, self.source = self.line
        except Exception:
            error_message = messages.crit_error_bad_move % (self.raw_line,
                                                            self.file)
            error_message = error_message + format_traceback()
            raise_from(CritError(error_message), None)

        self.source = norm_path(self.source)
        self.destination = norm_path(
            os.path.join(self.move_dir, self.destination))
Esempio n. 5
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    def move_nt(self, movetype):
        """Create symlinks/copies using NT shell command specified in metadata. 
        
        Parameters
        ----------
    	movetype : str
        	Type of file movement. Takes either ``'copy'`` or ``'symlink'``. 

        Returns
        -------
        None
        """
        for source, destination in self.move_list:
            if os.path.isdir(source):
                link_option = '/d'
                copy_option = ''
            elif os.path.isfile(source):
                link_option = ''
                copy_option = 'cmd /c echo F | '

            if movetype == 'copy':
                command = metadata.commands[self.osname]['makecopy'] % (
                    copy_option, source, destination)
            elif movetype == 'symlink':
                command = metadata.commands[self.osname]['makelink'] % (
                    link_option, destination, source)

            process = subprocess_fix.Popen(command,
                                           shell=True,
                                           stdout=subprocess.PIPE,
                                           stderr=subprocess.PIPE,
                                           universal_newlines=True)
            process.wait()
            stdout, stderr = process.communicate()

            if process.returncode != 0:
                error_message = messages.crit_error_move_command % command
                error_message = error_message + format_traceback(stderr)
                raise CritError(error_message)
Esempio n. 6
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    def get_move_directive_list(self):
        """Parse list of files to create symlink directives. 
                
        Returns
        -------
        None
        """
        lines = []
        for file in self.file_list:
            for raw_line in file_to_array(file):
                try:
                    line = str(raw_line).format(**self.mapping_dict)
                    lines.append((file, raw_line, line))
                except KeyError as e:
                    key = str(e).lstrip("u'").rstrip("'")
                    error_message = messages.crit_error_path_mapping % (
                        key, key, file, raw_line, key)
                    error_message = error_message + format_traceback()
                    raise_from(CritError(error_message), None)

        self.move_directive_list = [
            MoveDirective(file, raw_line, line, self.move_dir)
            for (file, raw_line, line) in lines
        ]