Esempi in Python per TrackExtractor.extractOneTrackManyRegsToOneFile

Esempio n. 1

File: Api.py Progetto: sivertkh/gtrackcore

def _commonExportFile(outFileName, genome, trackName, fileFormatName, allowOverlaps, bins):
    trackName = _convertTrackName(trackName)
    if not _trackNameExists(genome, trackName):
        return
        
    outFileName = os.path.abspath(outFileName)

    from gtrackcore.extract.TrackExtractor import TrackExtractor
    TrackExtractor.extractOneTrackManyRegsToOneFile(trackName, bins, outFileName, fileFormatName=fileFormatName, \
                                                    globalCoords=True, asOriginal=False, \
                                                    allowOverlaps=allowOverlaps)

Esempio n. 2

def _commonExportFile(outFileName, genome, trackName, fileFormatName, allowOverlaps, bins):
    trackName = _convertTrackName(trackName)
    if not _trackNameExists(genome, trackName):
        return
        
    outFileName = os.path.abspath(outFileName)

    from gtrackcore.extract.TrackExtractor import TrackExtractor
    TrackExtractor.extractOneTrackManyRegsToOneFile(trackName, bins, outFileName, fileFormatName=fileFormatName, \
                                                    globalCoords=True, asOriginal=False, \
                                                    allowOverlaps=allowOverlaps)