def __init__(self, parent=None):
super(ParametersGUI, self).__init__(parent)
self.ui = Ui_DockWidget_Parameters()
self.ui.setupUi(self)
class ParametersGUI(QDockWidget):
"""
classdocs
"""
""" constructor """
def __init__(self, parent=None):
super(ParametersGUI, self).__init__(parent)
self.ui = Ui_DockWidget_Parameters()
self.ui.setupUi(self)
""" connect to events emitted by the data_selector """
def setup(self, analysis):
self.ana = analysis
self.ana.parametersRaisedSignal.connect(self.fill_params)
self.ui.comboBox_EjectName.currentIndexChanged.connect(
self.toggle_ejection)
def fill_params(self, filename, pipeline):
log.debug("event from %s", self.sender())
short = str(filename).split(sep="\\")
self.ui.lineEdit_File.setText(short[-1])
self.filename = filename
if pipeline.raw.scriptable:
self.enable_parameters_box()
self.ui.groupBox_Comment.setVisible(False)
s = pipeline.scr
self.excitBuffer, self.excitation = s.get_excit()
self.ejectBuffer, self.ejection = s.get_eject()
self.detectBuffer, self.detection = s.get_detect()
# clear old values
self.update_excitation()
self.update_ejections()
self.update_detection()
else:
# clear previous comment
self.disable_parameters_box()
self.ui.textEdit_Comment.clear()
self.ui.groupBox_Comment.setVisible(True)
xmltree = XMLPirenea(self.filename + ".xml")
comment = xmltree.get_comment()
self.ui.textEdit_Comment.append(comment)
def toggle_ejection(self):
log.debug("event from %s", self.sender())
self.ui.lineEdit_EjectType.clear()
self.ui.lineEdit_EjectDuration.clear()
self.ui.comboBox_EjectIntensity.clear()
self.ui.comboBox_EjectStart.clear()
self.ui.comboBox_EjectEnd.clear()
index = self.ui.comboBox_EjectName.currentIndex()
# test if items exist
if self.ejection and index >= 0:
intensity = []
start = []
end = []
if len(self.ejectBuffer[index]) > 1:
wave = self.ejectBuffer[index][2]
duration = "{:.1f}".format(float(self.ejectBuffer[index][3]))
intensity.append(
"{:.1f}".format(float(self.ejectBuffer[index][4])))
start.append(
"{:.1f}".format(float(self.ejectBuffer[index][5])))
if len(self.ejectBuffer[index]) > 6:
end.append("{:.1f}".format(float(self.ejectBuffer[index][6])))
if len(self.ejectBuffer[index]) > 7:
intensity.append(
"{:.1f}".format(float(self.ejectBuffer[index][7])))
start.append(
"{:.1f}".format(float(self.ejectBuffer[index][8])))
end.append("{:.1f}".format(float(self.ejectBuffer[index][9])))
if duration:
self.ui.lineEdit_EjectDuration.setText(duration)
self.ui.lineEdit_EjectType.setText(wave)
self.ui.comboBox_EjectIntensity.addItems(intensity)
self.ui.comboBox_EjectStart.addItems(start)
self.ui.comboBox_EjectEnd.addItems(end)
def enable_parameters_box(self):
self.ui.groupBox_Detect.setVisible(True)
self.ui.groupBox_Eject.setVisible(True)
self.ui.groupBox_Excit.setVisible(True)
def disable_parameters_box(self):
self.ui.groupBox_Detect.setVisible(False)
self.ui.groupBox_Eject.setVisible(False)
self.ui.groupBox_Excit.setVisible(False)
def update_excitation(self):
self.ui.lineEdit_ExcitType.clear()
self.ui.lineEdit_ExcitDuration.clear()
self.ui.lineEdit_ExcitIntensity.clear()
self.ui.lineEdit_ExcitStart.clear()
self.ui.lineEdit_ExcitEnd.clear()
if self.excitation:
if len(self.excitBuffer[0]) >= 7:
wave = self.excitBuffer[0][2]
self.ui.lineEdit_ExcitType.setText(wave)
self.ui.lineEdit_ExcitDuration.setText(
"{:.1f}".format(float(self.excitBuffer[0][3])))
self.ui.lineEdit_ExcitIntensity.setText(
"{:.1f}".format(float(self.excitBuffer[0][4])))
self.ui.lineEdit_ExcitStart.setText(
"{:.1f}".format(float(self.excitBuffer[0][5])))
self.ui.lineEdit_ExcitEnd.setText(
"{:.1f}".format(float(self.excitBuffer[0][6])))
else:
self.ui.lineEdit_ExcitType.setText(self.excitation)
def update_ejections(self):
self.ui.comboBox_EjectName.clear()
if self.ejection:
self.ui.comboBox_EjectName.addItems(self.ejection)
def update_detection(self):
self.ui.comboBox_DetectName.clear()
if self.detection:
self.ui.comboBox_DetectName.addItem(self.detection)
class ParametersGUI(QDockWidget):
"""
classdocs
"""
""" constructor """
def __init__(self, parent=None):
super(ParametersGUI, self).__init__(parent)
self.ui = Ui_DockWidget_Parameters()
self.ui.setupUi(self)
""" connect to events emitted by the data_selector """
def setup(self, analysis):
self.ana = analysis
self.ana.parametersRaisedSignal.connect(self.fill_params)
self.ui.comboBox_EjectName.currentIndexChanged.connect(
self.toggle_ejection)
def fill_params(self, filename, pipeline):
log.debug("event from %s", self.sender())
short = str(filename).split(sep="\\")
self.ui.lineEdit_File.setText(short[-1])
if pipeline.raw.scriptable:
self.enable_parameters_box()
s = pipeline.scr
self.excitBuffer, self.excitation = s.get_excit()
self.ejectBuffer, self.ejection = s.get_eject()
self.detectBuffer, self.detection = s.get_detect()
# clear old values
self.update_excitation()
self.update_ejections()
self.update_detection()
else:
self.disable_parameters_box()
def toggle_ejection(self):
log.debug("event from %s", self.sender())
self.ui.lineEdit_EjectType.clear()
self.ui.lineEdit_EjectDuration.clear()
self.ui.comboBox_EjectIntensity.clear()
self.ui.comboBox_EjectStart.clear()
self.ui.comboBox_EjectEnd.clear()
index = self.ui.comboBox_EjectName.currentIndex()
# test if items exist
if self.ejection and index >= 0:
intensity = []
start = []
end = []
if len(self.ejectBuffer[index]) > 1:
wave = self.ejectBuffer[index][2]
duration = "{:.1f}".format(float(self.ejectBuffer[index][3]))
intensity.append(
"{:.1f}".format(float(self.ejectBuffer[index][4])))
start.append(
"{:.1f}".format(float(self.ejectBuffer[index][5])))
if len(self.ejectBuffer[index]) > 6:
end.append("{:.1f}".format(float(self.ejectBuffer[index][6])))
if len(self.ejectBuffer[index]) > 7:
intensity.append(
"{:.1f}".format(float(self.ejectBuffer[index][7])))
start.append(
"{:.1f}".format(float(self.ejectBuffer[index][8])))
end.append("{:.1f}".format(float(self.ejectBuffer[index][9])))
if duration:
self.ui.lineEdit_EjectDuration.setText(duration)
self.ui.lineEdit_EjectType.setText(wave)
self.ui.comboBox_EjectIntensity.addItems(intensity)
self.ui.comboBox_EjectStart.addItems(start)
self.ui.comboBox_EjectEnd.addItems(end)
def enable_parameters_box(self):
self.ui.groupBox_Detect.setVisible(True)
self.ui.groupBox_Eject.setVisible(True)
self.ui.groupBox_Excit.setVisible(True)
def disable_parameters_box(self):
self.ui.groupBox_Detect.setVisible(False)
self.ui.groupBox_Eject.setVisible(False)
self.ui.groupBox_Excit.setVisible(False)
def update_excitation(self):
self.ui.lineEdit_ExcitType.clear()
self.ui.lineEdit_ExcitDuration.clear()
self.ui.lineEdit_ExcitIntensity.clear()
self.ui.lineEdit_ExcitStart.clear()
self.ui.lineEdit_ExcitEnd.clear()
if self.excitation:
if len(self.excitBuffer[0]) >= 7:
wave = self.excitBuffer[0][2]
self.ui.lineEdit_ExcitType.setText(wave)
self.ui.lineEdit_ExcitDuration.setText(
"{:.1f}".format(float(self.excitBuffer[0][3])))
self.ui.lineEdit_ExcitIntensity.setText(
"{:.1f}".format(float(self.excitBuffer[0][4])))
self.ui.lineEdit_ExcitStart.setText(
"{:.1f}".format(float(self.excitBuffer[0][5])))
self.ui.lineEdit_ExcitEnd.setText(
"{:.1f}".format(float(self.excitBuffer[0][6])))
else:
self.ui.lineEdit_ExcitType.setText(self.excitation)
def update_ejections(self):
self.ui.comboBox_EjectName.clear()
if self.ejection:
self.ui.comboBox_EjectName.addItems(self.ejection)
def update_detection(self):
self.ui.comboBox_DetectName.clear()
if self.detection:
self.ui.comboBox_DetectName.addItem(self.detection)
def __init__(self, parent=None):
super(ParametersGUI, self).__init__(parent)
self.ui = Ui_DockWidget_Parameters()
self.ui.setupUi(self)
class ParametersGUI(QDockWidget):
"""
classdocs
"""
""" constructor """
analysisRaisedSignal = pyqtSignal(str, object)
def __init__(self, parent=None):
super(ParametersGUI, self).__init__(parent)
self.ui = Ui_DockWidget_Parameters()
self.ui.setupUi(self)
""" connect to events emitted by the data_selector """
def setup(self, analysis):
self.ana = analysis
self.ana.parametersRaisedSignal.connect(self.fill_params)
self.ui.doubleSpinBox_Tof1.valueChanged.connect(self.calib_event)
self.ui.doubleSpinBox_Tof2.valueChanged.connect(self.calib_event)
self.ui.doubleSpinBox_Tof3.valueChanged.connect(self.calib_event)
self.ui.doubleSpinBox_Mass1.valueChanged.connect(self.calib_event)
self.ui.doubleSpinBox_Mass2.valueChanged.connect(self.calib_event)
self.ui.doubleSpinBox_Mass3.valueChanged.connect(self.calib_event)
self.ui.pushButton_ChangeCalib.clicked.connect(self.change_calib)
self.ui.pushButton_ApplyCalib.clicked.connect(self.apply_calib)
self.ui.pushButton_SaveCalibData.clicked.connect(self.write_calib_data)
self.ui.pushButton_SaveMmassData.clicked.connect(self.write_mmass_data)
def fill_params(self, pip):
log.debug("event from %s", self.sender())
self.pip = pip
self.ui.lineEdit_File.setText(self.pip.shortname)
self.update_header()
if self.pip.data.isCalibAvailable:
self.ui.groupBox_Calibration.setEnabled(False)
self.ui.pushButton_ChangeCalib.setEnabled(True)
self.ui.pushButton_ApplyCalib.setEnabled(False)
self.ui.pushButton_SaveCalibData.setEnabled(False)
else:
self.ui.groupBox_Calibration.setEnabled(True)
self.ui.pushButton_ChangeCalib.setEnabled(False)
self.ui.pushButton_ApplyCalib.setEnabled(True)
self.ui.pushButton_SaveCalibData.setEnabled(False)
def update_header(self):
# self.ui.plainTextEdit_Header.clear()
self.ui.plainTextEdit_Header.setPlainText(self.pip.data.headtext)
def calib_event(self):
log.debug("event from %s", self.sender())
self.time_list = []
self.mass_list = []
tof1 = float(self.ui.doubleSpinBox_Tof1.value())
tof2 = float(self.ui.doubleSpinBox_Tof2.value())
tof3 = float(self.ui.doubleSpinBox_Tof3.value())
mass1 = float(self.ui.doubleSpinBox_Mass1.value())
mass2 = float(self.ui.doubleSpinBox_Mass2.value())
mass3 = float(self.ui.doubleSpinBox_Mass3.value())
self.time_list = [0.0, tof1, tof2, tof3]
self.mass_list = [0.001, mass1, mass2, mass3]
def apply_calib(self):
log.debug("event from %s", self.sender())
self.calib_event()
self.pip.calib(self.time_list, self.mass_list)
self.ana.time_list = self.time_list
self.ana.mass_list = self.mass_list
if self.pip.isCalibFound:
self.ui.pushButton_SaveCalibData.setEnabled(True)
self.ui.pushButton_SaveMmassData.setEnabled(True)
def change_calib(self):
log.debug("event from %s", self.sender())
self.ui.groupBox_Calibration.setEnabled(True)
self.ui.pushButton_ChangeCalib.setEnabled(False)
self.ui.pushButton_ApplyCalib.setEnabled(True)
self.ui.pushButton_SaveCalibData.setEnabled(False)
self.pip.data.isCalibAvailable = False
def write_calib_data(self):
log.debug("event from %s", self.sender())
self.pip.write_calib_data()
def write_mmass_data(self):
log.debug("event from %s", self.sender())
self.pip.write_mmass_data()