def node_clicked(self, it_index):
print "it_index =", it_index
if(self.tree_clickable == True):
#TODO Think of a more robust way to "disconnect" ... next line
try:
self.centre_widget.update_command_lst.disconnect(
self.update_low_level_command_lst)
except:
print "<< update_low_level_command_lst >> already disconnected"
print "TreeNavWidget(node_clicked)"
item = self.tree_out.std_mod.itemFromIndex(it_index)
prn_lst_lst_cmd(item.idials_node)
lin_num = item.idials_node.lin_num
print "clicked item lin_num (self.tree_out.std_mod) =", lin_num
cmd_ovr = "goto " + str(lin_num)
self.cmd_exe(cmd_ovr)
self.centre_widget.set_widget(nxt_cmd = item.idials_node.command_lst[0],
curr_step = self.idials_runner.current_node)
self.check_reindex_pop()
update_info(self)
self.check_gray_outs()
self.reconnect_when_ready()
self.centre_widget.update_command_lst.connect(
self.update_low_level_command_lst)
def update_after_finished(self):
self.chouse_if_predict_or_report()
update_info(self)
self.txt_bar.end_motion()
self.just_reindexed = False
tmp_curr = self.idials_runner.current_node
prn_lst_lst_cmd(tmp_curr)
if (
tmp_curr.ll_command_lst[0][0] == "refine_bravais_settings"
and tmp_curr.success is True
):
self.idials_runner.run(command=["mkchi"], ref_to_class=None)
self.idials_runner.current_node.ll_command_lst = [["reindex"]]
elif tmp_curr.ll_command_lst[0][0] == "reindex" and tmp_curr.success is True:
self.just_reindexed = True
try:
self.my_pop.close()
except BaseException as e:
# We don't want to catch bare exceptions but don't know
# what this was supposed to catch. Log it.
logger.debug(
"Caught unknown exception type %s: %s", type(e).__name__, e
)
logger.debug("no need to close reindex table")
elif tmp_curr.ll_command_lst[0][0] == "export" and tmp_curr.success is True:
self.gui2_log = try_move_last_info(tmp_curr, self.gui2_log)
self.check_reindex_pop()
self.check_gray_outs()
self.reconnect_when_ready()
if (
tmp_curr.ll_command_lst[0][0] == "generate_mask"
and tmp_curr.success is True
):
self.img_view.my_painter.reset_mask_tool(None)
elif (
tmp_curr.ll_command_lst[0][0] == "modify_geometry"
and tmp_curr.success is True
):
self.img_view.my_painter.reset_bc_tool(None)
with open(self.storage_path + "/dui_files/bkp.pickle", "wb") as bkp_out:
pickle.dump(self.idials_runner, bkp_out)
def refresh_my_gui(self):
lin_num = self.idials_runner.current_node.lin_num
logger.debug("doing goto: %s", lin_num)
cmd_ovr = "goto " + str(lin_num)
self.cmd_exe(cmd_ovr)
self.centre_par_widget.set_widget(
nxt_cmd=self.idials_runner.current_node.ll_command_lst[0][0],
curr_step=self.idials_runner.current_node,
)
self.check_reindex_pop()
self.chouse_if_predict_or_report()
update_info(self)
self.check_gray_outs()
self.reconnect_when_ready()
logger.info("\n ... recovering from previous run of GUI \n")
def node_clicked(self, it_index):
logger.debug("\n it_index = %s", it_index)
logger.debug(" type(it_index) = %s", type(it_index))
if self.tree_clickable:
# TODO Think of a more robust way to "disconnect" ... next line
try:
self.centre_par_widget.update_command_lst_high_level.disconnect(
self.update_low_level_command_lst
)
except BaseException as e:
# We don't want to catch bare exceptions but don't know
# what this was supposed to catch. Log it.
logger.info(" Caught unknown exception type %s: %s", type(e).__name__, e)
logger.info("\n Tst A1 \n")
item = self.tree_out.std_mod.itemFromIndex(it_index)
prn_lst_lst_cmd(item.idials_node)
lin_num = item.idials_node.lin_num
cmd_ovr = "goto " + str(lin_num)
self.cmd_exe(cmd_ovr)
self.centre_par_widget.set_widget(
nxt_cmd=item.idials_node.ll_command_lst[0][0],
curr_step=self.idials_runner.current_node,
)
self.check_reindex_pop()
self.chouse_if_predict_or_report()
update_info(self)
self.check_gray_outs()
self.reconnect_when_ready()
self.centre_par_widget.update_command_lst_high_level.connect(
self.update_low_level_command_lst
)
def cmd_exe(self, new_cmd):
# Running NOT in parallel
update_info(self)
self.idials_runner.run(command=new_cmd, ref_to_class=None)
self.check_reindex_pop()
self.reconnect_when_ready()
def tab_changed(self, num=0):
self.view_tab_num = num
self.chouse_if_predict_or_report()
update_info(self)
def update_after_finished(self):
update_info(self)
self.txt_bar.end_motion()
self.just_reindexed = False
if(self.idials_runner.make_next == True):
tmp_curr = self.idials_runner.current_node.prev_step
nxt_cmd = get_next_step(tmp_curr)
print "get_next_step(tmp_curr) =", nxt_cmd
if(nxt_cmd != "reindex" and tmp_curr.success == True):
self.centre_widget.set_widget(nxt_cmd = nxt_cmd)
self.idials_runner.current_node.command_lst[0] = nxt_cmd
else:
tmp_curr = self.idials_runner.current_node
if(tmp_curr.command_lst[0] == "refine_bravais_settings" and
tmp_curr.success == True):
if(self.idials_runner.make_next == False):
self.idials_runner.run(command = ["mkchi"],
ref_to_class = None)
self.idials_runner.current_node.command_lst[0] = "reindex"
elif(tmp_curr.command_lst[0] == "reindex" and
tmp_curr.success == True):
self.just_reindexed = True
try:
self.my_pop.close()
except:
print "no need to close reindex table"
elif(tmp_curr.command_lst[0] == "integrate" and
tmp_curr.success == True):
if(self.idials_runner.make_next == False):
self.idials_runner.run(command = ["mkchi"],
ref_to_class = None)
mtz_name = str(self.centre_widget.widg_lst[5].my_widget.
sipler_widget.mtz_name_lin.text())
print "MTZ name =", mtz_name
mtz_export_par = "mtz.hklout=" + mtz_name
self.cmd_launch(["export", mtz_export_par])
if(tmp_curr.command_lst[0] != "refine_bravais_settings" and
tmp_curr.command_lst[0] != "integrate" and
self.run_all == True):
self.run_clicked()
self.check_reindex_pop()
self.check_gray_outs()
self.reconnect_when_ready()
with open(self.storage_path + "/dui_files/bkp.pickle", "wb") as bkp_out:
pickle.dump(self.idials_runner, bkp_out)
def tab_changed(self, num):
self.view_tab_num = num
update_info(self)
