def _assemblyMetricsTable(kind):
with h.table(class_="table table-condensed"):
with h.tr():
h.th("Metric")
with h.th():
h.UNESCAPED("Large " + kind + "s (≥ 500bp)")
h.th("All " + kind + 's')
for metric, value in sample.metrics(assembler, kind).items():
if len(value) == 1:
h.tr(h.td(metric), h.td(value[0], colspan='2'))
else:
h.tr(h.td(metric), h.td(value[0]), h.td(value[1]))
def _assemblyMetricsTable(kind):
with h.table(class_="table table-condensed"):
with h.tr():
h.th("Metric")
with h.th():
h.UNESCAPED("Large " + kind + "s (≥ 500bp)")
h.th("All " + kind + 's')
for metric, value in sample.metrics(assembler, kind).items():
if len(value) == 1:
h.tr(h.td(metric), h.td(value[0], colspan='2'))
else:
h.tr(h.td(metric), h.td(value[0]), h.td(value[1]))
def _assemblySettingsTable():
with h.table(class_="table table-condensed"):
h.tr(h.th("Parameter"), h.th("Value"))
for param, value in sample.assemblySettings(assembler).items():
h.tr(h.td(param), h.td(value))
def _assemblySettingsTable():
with h.table(class_="table table-condensed"):
h.tr(h.th("Parameter"), h.th("Value"))
for param, value in sample.assemblySettings(assembler).items():
h.tr(h.td(param), h.td(value))