def test_gencode(self):
species = genomes.species()
self.assertIsInstance(species, list)
self.assertTrue(len(species) > 0)
self.assertIsInstance(species[0], str)
self.assertTrue('human' in species)
self.assertTrue('mouse' in species)
def test_ensembl_2(self):
species = genomes.species(source='ensembl', release=84)
self.assertIsInstance(species, list)
self.assertTrue(len(species) > 0)
self.assertTrue('homo_sapiens' in species)
def test_bad_source(self):
message = r'Source .* is not supported.'
with self.assertRaisesRegex(ValueError, message):
genomes.species(source='invalid_source')