def test18(self):
instance = QGmodel()
dx = instance.parameters.dx
dy = instance.parameters.dy
dx1, dy1 = instance.grid.cellsize()
self.assertEqual(dx, dx1)
self.assertEqual(dy, dy1)
instance.stop()
def test10(self):
instance = QGmodel()
org = instance.boundaries(1)
self.assertEquals(org.psi.number, 0.)
self.assertEquals(org.dpsi_dt.number, 0.)
shape = org.shape
copy = org.copy()
instance.stop()
def reference(tend=1. | units.hour, dt=3600. | units.s):
q = QGmodel(redirection="none")
q.parameters.dt = dt
q.evolve_model(tend)
psi = q.grid[:, :, 0].psi.number
return psi
def test22(self):
instance = QGmodel(redirection="none")
wind_field = instance.wind_field.copy()
self.assertEquals(instance.get_name_of_current_state(), 'RUN')
self.assertEqual(wind_field.shape, (401, 401))
pi = 3.14159265358979
#expected=cos(2.*pi*((j-1.)/(Ny-1.)-0.5))+2.*sin(pi*((j-1.)/(Ny-1.)-0.5))
Ly = instance.parameters.Ly
tau = instance.parameters.tau
expected = tau * (numpy.cos(2 * pi * (wind_field.y / Ly - 0.5)) +
2. * numpy.sin(pi * (wind_field.y / Ly - 0.5)))
self.assertAlmostEquals(wind_field.tau_x, expected, 7)
def test19(self):
instance = QGmodel()
cellsize = instance.grid.cellsize()
self.assertEquals(instance.get_name_of_current_state(), 'EDIT')
instance.parameters.boundary_west = "interface"
self.assertEquals(instance.get_name_of_current_state(),
'CHANGE_PARAMETERS_EDIT')
instance.recommit_parameters()
self.assertEquals(instance.get_name_of_current_state(), 'EDIT')
instance.stop()
def test2(self):
instance = QGmodel(redirection="none")
instance.grid[0, 0, 0].psi
self.assertEquals(instance.get_name_of_current_state(), 'EDIT')
instance.initialize_grid()
self.assertEquals(instance.get_name_of_current_state(), 'RUN')
instance.stop()
def test1(self):
instance = QGmodel()
instance.evolve_model(1 | units.hour)
self.assertEquals(instance.get_name_of_current_state(), 'EVOLVED')
psi = instance.grid.psi
self.assertEquals(instance.get_name_of_current_state(), 'RUN')
instance.stop()
def test6(self):
instance = QGmodel()
Nx, Ny, Nm = instance.grid.shape
self.assertEqual(401, Nx)
minx, maxx, miny, maxy, minz, maxz = instance.get_index_range_inclusive(
)
self.assertEqual(minx, 1)
self.assertEqual(miny, 1)
self.assertEqual(minz, 1)
self.assertEqual(maxx, Nx)
self.assertEqual(maxy, Ny)
self.assertEqual(maxz, Nm)
instance.stop()
def test17(self):
instance = QGmodel()
self.assertEqual(instance.parameters.position_x, 0. | units.m)
self.assertEqual(instance.parameters.position_y, 0. | units.m)
instance.parameters.position_y = 123456. | units.m
instance.parameters.position_x = 543216. | units.m
self.assertEqual(instance.parameters.position_y, 123456. | units.m)
self.assertEqual(instance.parameters.position_x, 543216. | units.m)
x = instance.grid[0, 0, 0].x
y = instance.grid[0, 0, 0].y
self.assertEqual(y, 123456. | units.m)
self.assertEqual(x, 543216. | units.m)
i, j = instance.get_index_of_position(x, y)
self.assertEqual(i, 1)
self.assertEqual(j, 1)
instance.stop()
def test23(self):
instance = QGmodel(redirection="none")
Lx = instance.parameters.Lx / 2
instance.parameters.Lx = Lx
instance2 = QGmodel(redirection="none")
print(instance.parameters.copy())
instance2.parameters.reset_from_memento(instance.parameters)
self.assertEqual(instance2.parameters.Lx, Lx)
instance.stop()
instance2.stop()
def test24(self):
instance = QGmodel()
instance.parameters.timestep_method = "euler"
instance.parameters.raw_parameter = 0.123
instance.commit_parameters()
b1 = instance.get_timestep_method()
self.assertEqual(b1, "euler")
b1 = instance.get_raw_alpha()
self.assertEqual(b1, 0.123)
instance.stop()
def test14(self):
instance = QGmodel()
instance.parameters.boundary_south = "interface"
instance.commit_parameters()
b1, b2, b3, b4 = instance.get_boundary_conditions()
self.assertEqual(b3, "interface")
instance.stop()
def test5(self):
instance = QGmodel(redirection="none")
instance.before_get_parameter()
dt = instance.parameters.dt
instance.evolve_model(dt)
dpsi_dt1 = instance.grid.dpsi_dt
psi1 = instance.grid.psi
instance.evolve_model(2 * dt)
psi2 = instance.grid.psi
dpsi_dt2 = instance.grid.dpsi_dt
dpsi_estimate = ((psi2 - psi1) / dt).mean()
dpsi = 0.5 * (dpsi_dt1 + dpsi_dt2).mean()
self.assertTrue(abs(dpsi - dpsi_estimate) / dpsi < 0.1)
instance.stop()
def viebahn2014(N=50, reynolds_number=1, dm=0.04):
beta0 = 1.8616e-11 | (units.m * units.s)**-1
L = 1.e6 | units.m
H = 4000. | units.m
rho = 1000. | units.kg / units.m**3
dx = L / N
A_H = beta0 * (dm * L)**3
tau = reynolds_number * A_H * rho * beta0 * H
U = tau / beta0 / rho / H / L
delta_m = (A_H / beta0)**(1. / 3) / L
delta_i = (U / beta0)**0.5 / L
timescale = 1. / (beta0 * L)
print("Viebahn 2014 setup")
print("N=%i, Reynolds_number=%f" % (N, reynolds_number))
print("dm (derived):", (A_H / beta0)**(1. / 3) / L)
print("tau:", tau.value_in(units.Pa))
print("A:", A_H)
print("timescale:", timescale.in_(units.s))
print("delta_m:", delta_m)
print("delta_i:", delta_i)
qg = QGmodel(redirection="none")
qg.parameters.Lx = L
qg.parameters.Ly = L
qg.parameters.dx = dx
qg.parameters.dy = dx
qg.parameters.dt = 900 | units.s
qg.parameters.A_H = A_H
qg.parameters.interface_wind = True
qg.parameters.rho = rho
qg.parameters.beta0 = beta0
qg.parameters.ocean_depth = H
qg.parameters.tau = tau
def wind_function(x, y):
return single_gyre_wind_model(x, y, L, tau)
qg.set_wind(wind_function)
return qg
def test15(self):
instance = QGmodel(redirection="none")
dx = instance.parameters.dx
Lx = instance.parameters.Lx
instance.grid[1:-1, 1:-1, 0].psi = 1. | units.m**2 / units.s
psi, dpsi = instance.get_psi_state_at_point(dx / 2, Lx / 2., Lx / 2.)
self.assertEqual(psi, 1. | units.m**2 / units.s)
psi, dpsi = instance.get_psi_state_at_point(dx, Lx / 2., Lx / 2.)
self.assertEqual(psi, 1. | units.m**2 / units.s)
psi, dpsi = instance.get_psi_state_at_point(2 * dx, Lx / 2., Lx / 2.)
self.assertEqual(psi, 1. | units.m**2 / units.s)
psi, dpsi = instance.get_psi_state_at_point(dx, dx / 2., Lx / 2.)
self.assertEqual(psi, 0.5 | units.m**2 / units.s)
psi, dpsi = instance.get_psi_state_at_point(dx, dx / 2., dx / 2.)
self.assertEqual(psi, 0.25 | units.m**2 / units.s)
instance.stop()
def test3(self):
instance = QGmodel(redirection="none")
dt = 0.123 | units.hour
instance.parameters.dt = dt
instance.evolve_model(2 * dt)
self.assertEqual(instance.model_time, 2 * dt)
instance.stop()
def test8(self):
instance = QGmodel(redirection="none")
Lx2 = instance.parameters.Lx / 2
instance.parameters.Ly = Lx2
Nx, Ny, Nm = instance.grid.shape
s = instance.boundaries(1).shape
self.assertEqual(s, (2, Ny + 2, 1))
s = instance.boundaries(2).shape
self.assertEqual(s, (2, Ny + 2, 1))
s = instance.boundaries(3).shape
self.assertEqual(s, (Nx + 2, 2, 1))
s = instance.boundaries(4).shape
self.assertEqual(s, (Nx + 2, 2, 1))
instance.stop()
def test12(self):
instance = QGmodel()
instance.parameters.Ly = instance.parameters.Ly / 16
instance.parameters.Lx = instance.parameters.Lx / 16
Nx, Ny, Nm = instance.grid.shape
ix = numpy.arange(Nx) + 1
iy = numpy.arange(Ny) + 1
onesx = numpy.ones(Nx)
onesy = numpy.ones(Ny)
i1 = numpy.outer(ix, onesx).flatten()
j1 = numpy.outer(onesy, iy).flatten()
x = instance.grid.x.flatten()
y = instance.grid.y.flatten()
i, j = instance.get_index_of_position(x, y)
self.assertEquals(i - i1, 0.)
self.assertEquals(j - j1, 0.)
instance.stop()
def test16(self):
instance = QGmodel()
dx = instance.parameters.dx
instance.evolve_model(1 | units.hour)
x = instance.grid[:, 10, 0].x
y = instance.grid[:, 10, 0].y
dpsi1 = instance.grid[:, 10, 0].dpsi_dt
psi2, dpsi2 = instance.get_psi_state_at_point(0. * x + dx, x, y)
self.assertAlmostEquals(dpsi1, dpsi2)
instance.stop()
def test7(self):
instance = QGmodel()
Nx, Ny, Nm = instance.grid.shape
self.assertEqual(401, Nx)
minx, maxx, miny, maxy, minz, maxz = instance.get_boundary_index_range_inclusive(
1)
self.assertEqual(minx, 0)
self.assertEqual(miny, 0)
self.assertEqual(minz, 1)
self.assertEqual(maxx, 1)
self.assertEqual(maxy, Ny + 1)
self.assertEqual(maxz, Nm)
minx, maxx, miny, maxy, minz, maxz = instance.get_boundary_index_range_inclusive(
2)
self.assertEqual(minx, Nx)
self.assertEqual(miny, 0)
self.assertEqual(minz, 1)
self.assertEqual(maxx, Nx + 1)
self.assertEqual(maxy, Ny + 1)
self.assertEqual(maxz, Nm)
minx, maxx, miny, maxy, minz, maxz = instance.get_boundary_index_range_inclusive(
3)
self.assertEqual(minx, 0)
self.assertEqual(miny, 0)
self.assertEqual(minz, 1)
self.assertEqual(maxx, Nx + 1)
self.assertEqual(maxy, 1)
self.assertEqual(maxz, Nm)
minx, maxx, miny, maxy, minz, maxz = instance.get_boundary_index_range_inclusive(
4)
self.assertEqual(minx, 0)
self.assertEqual(miny, Ny)
self.assertEqual(minz, 1)
self.assertEqual(maxx, Nx + 1)
self.assertEqual(maxy, Ny + 1)
self.assertEqual(maxz, Nm)
instance.stop()
def test11(self):
instance = QGmodel(redirection="none")
instance.parameters.Ly = instance.parameters.Ly / 8
instance.parameters.Lx = instance.parameters.Lx / 8
for i in [1, 2, 3, 4]:
org = instance.boundaries(i)
shape = org.shape
copy = org.copy()
channel = copy.new_channel_to(org)
copy.psi = numpy.random.random(shape) | units.m**2 / units.s
copy.dpsi_dt = numpy.random.random(shape) | units.m**2 / units.s**2
channel.copy_attributes(["psi", "dpsi_dt"])
self.assertEquals(copy.psi, instance.boundaries(i).psi)
self.assertEquals(copy.dpsi_dt, instance.boundaries(i).dpsi_dt)
instance.stop()
def interface_bc(tend=1. | units.hour, dt=3600. | units.s, correct=True):
q = QGmodel(redirection="none")
q.parameters.dt = dt
q.parameters.xbound1 = "interface"
while q.model_time < tend:
q.evolve_model(q.model_time + dt)
if correct:
xb1 = q.boundaries(1).copy()
xb1.psi[0, 1:-1, 0] = -q.grid.psi[1, :, 0]
channel = xb1.new_channel_to(q.boundaries(1))
channel.copy()
psi = q.grid[:, :, 0].psi.number
return psi
def test4(self):
instance = QGmodel(redirection="none")
instance.grid[0, 0, 0].dpsi_dt
self.assertEquals(instance.get_name_of_current_state(), 'RUN')
instance.stop()
def test9(self):
instance = QGmodel()
org = instance.grid
copy = org.copy()
instance.stop()
def test21(self):
instance = QGmodel()
self.assertFalse(instance.parameters.interface_wind)
instance.parameters.interface_wind = True
self.assertTrue(instance.parameters.interface_wind)
instance.stop()
def test20(self):
instance = QGmodel()
cellsize = instance.grid.cellsize()
self.assertEquals(instance.get_name_of_current_state(), 'EDIT')
a = instance.parameters.robert_asselin_alpha
instance.parameters.robert_asselin_alpha = 12345.
self.assertEquals(instance.get_name_of_current_state(),
'CHANGE_PARAMETERS_EDIT')
self.assertEqual(instance.parameters.robert_asselin_alpha, 12345.)
instance.cleanup_code()
self.assertEquals(instance.get_name_of_current_state(), 'END')
instance.initialize_code()
self.assertEqual(instance.parameters.robert_asselin_alpha, a)
self.assertEquals(instance.get_name_of_current_state(), 'INITIALIZED')
instance.stop()
def semi_domain_test(tend=1. | units.hour, dt=3600. | units.s):
q1 = QGmodel(redirection="none")
q1.parameters.dt = dt / 2
Lx = q1.parameters.Lx.value_in(1000 * units.km)
q2 = QGmodel(redirection="none")
q2.parameters.dt = dt / 2
q2.parameters.Lx /= 2
q2.parameters.boundary_east = "interface"
Nx, Ny, Nm = q1.grid.shape
pyplot.ion()
f = pyplot.figure(figsize=(12, 5))
pyplot.show()
i = 0
while q1.model_time < tend:
i = i + 1
tnow = q1.model_time
q1.evolve_model(tnow + dt / 2)
psi = q1.grid[(Nx - 1) / 2:(Nx - 1) / 2 + 2, :, 0].psi
dpsi_dt = q1.grid[(Nx - 1) / 2:(Nx - 1) / 2 + 2, :, 0].dpsi_dt
west = q2.boundaries("west").copy()
west[:, 1:-1, 0].psi = psi
west[:, 1:-1, 0].dpsi_dt = dpsi_dt
channel = west.new_channel_to(q2.boundaries("west"))
channel.copy()
q1.evolve_model(tnow + dt)
q2.evolve_model(tnow + dt)
# print(q1.grid[(Nx+1)/2,1,0].dpsi_dt)
# print(q2.boundaries("west")[0:2,0,0].x)
if i % 5 == 0:
psi1_complete = q1.grid.psi.number[:, :, 0]
psi1 = q1.grid[:(Nx + 1) / 2, :, 0].psi.number
psi2 = q2.grid[:, :, 0].psi.number
d = abs(psi2 - psi1)
print(d.max(), d.mean(), abs(psi1).max())
f.clf()
f1 = pyplot.subplot(131)
f1.imshow(psi1_complete.transpose() / psi1.max(),
vmin=0,
vmax=1,
extent=[0, Lx, 0, Lx],
origin="lower")
f1.set_xlabel("x (x1000 km)")
f2 = pyplot.subplot(132)
f2.imshow(psi2.transpose() / psi1.max(),
vmin=0,
vmax=1,
extent=[0, Lx / 2, 0, Lx],
origin="lower")
f2.set_xlabel("x (x1000 km)")
f3 = pyplot.subplot(133)
f3.imshow(d.transpose() / psi1.max(),
vmin=0,
vmax=0.001,
extent=[0, Lx / 2, 0, Lx],
origin="lower")
f3.set_xlabel("x (x1000 km)")
pyplot.draw()
pyplot.savefig("snapshots/half_domain_test-%6.6i.png" % i)
raw_input()
def test0(self):
instance = QGmodel()
self.assertEquals(instance.get_name_of_current_state(),
'UNINITIALIZED')
instance.initialize_code()
self.assertEquals(instance.get_name_of_current_state(), 'INITIALIZED')
instance.commit_parameters()
self.assertEquals(instance.get_name_of_current_state(), 'EDIT')
instance.evolve_model(1 | units.hour)
self.assertEquals(instance.get_name_of_current_state(), 'EVOLVED')
psi = instance.grid.psi
self.assertEquals(instance.get_name_of_current_state(), 'RUN')
instance.stop()
def high_level():
qg = QGmodel(redirection="none")
qg.initialize_code()
Nx = 128
Ny = 128
qg.parameters.Lx = 1.e6 | units.m
qg.parameters.Ly = 1.e6 | units.m
qg.parameters.dx = qg.parameters.Lx / Nx
qg.parameters.dy = qg.parameters.Ly / Ny
qg.parameters.ocean_depth = 600 | units.m
qg.parameters.tau = 0.15 | units.Pa
qg.parameters.beta0 = 1.6e-11 | (units.m * units.s)**-1
qg.parameters.dt = 1800 / 10 | units.s
rho0 = qg.parameters.rho
beta0 = qg.parameters.beta0
H = qg.parameters.ocean_depth
L = qg.parameters.Lx
T = qg.parameters.tau
U_dijkstra = 1.6e-2 | units.m / units.s
U = (T / (beta0 * rho0 * H * L))
print "actual, target U:", U.in_(units.m / units.s), U_dijkstra
Reynolds_number = 1.
A_H = U * L / Reynolds_number
qg.parameters.A_H = A_H
timescale = 1 / (beta0 * L)
print "timescale:", timescale.in_(units.s)
print qg.parameters
qg.commit_parameters()
# qg.grid.psi=(qg.grid.x/L ) | units.m**2/units.s
qg.initialize_grid()
pyplot.ion()
f = pyplot.figure()
pyplot.show()
for i in range(101):
tend = i * 12. | units.hour
qg.evolve_model(tend)
psi = qg.grid.psi[:, :, 0]
print qg.model_time.in_(units.day), psi.max(), psi.min()
pyplot.imshow(psi.transpose() / psi.max(),
vmin=0,
vmax=1,
origin="lower")
pyplot.draw()
raw_input()
def sample_run(Nx=128,
Ny=128,
Reynolds_number=50.,
wind_sigma=1.,
dtplot=24. | units.hour,
nstep=10):
qg = QGmodel(redirection="none")
qg.initialize_code()
L = 1.e6 | units.m
qg.parameters.Lx = L
qg.parameters.Ly = L
qg.parameters.dx = qg.parameters.Lx / Nx
qg.parameters.dy = qg.parameters.Ly / Ny
qg.parameters.ocean_depth = 600 | units.m
qg.parameters.tau = 0.15 | units.Pa
qg.parameters.beta0 = 1.6e-11 | (units.m * units.s)**-1
qg.parameters.dt = 900 | units.s
rho0 = qg.parameters.rho
beta0 = qg.parameters.beta0
H = qg.parameters.ocean_depth
L = qg.parameters.Lx
T = qg.parameters.tau
U_dijkstra = 1.6e-2 | units.m / units.s # mentioned in paper
U = (T / (beta0 * rho0 * H * L)) # actual derived from parameters
print("actual, target U:", U.in_(units.m / units.s), U_dijkstra)
A_H = U * L / Reynolds_number
qg.parameters.A_H = A_H
qg.parameters.wind_sigma = wind_sigma
timescale = 1 / (beta0 * L)
print("timescale:", timescale.in_(units.s))
print()
print(qg.parameters)
raw_input()
qg.commit_parameters()
# qg.grid.psi=(qg.grid.x/L ) | units.m**2/units.s
qg.initialize_grid()
pyplot.ion()
f = pyplot.figure()
pyplot.show()
for i in range(nstep + 1):
tend = i * dtplot
qg.evolve_model(tend)
psi = qg.grid.psi[:, :, 0]
print(qg.model_time.in_(units.day),(psi.max()/L).in_(units.km/units.hour), \
(psi.min()/L).in_(units.km/units.hour))
f.clf()
extent = [0, L.value_in(units.km), 0, L.value_in(units.km)]
pyplot.imshow(psi.transpose() / max(psi.max(), -psi.min()),
vmin=-1,
vmax=1,
origin="lower",
extent=extent)
pyplot.xlabel("km")
pyplot.title(str(qg.model_time.in_(units.day)))
pyplot.draw()
raw_input()
