def interface3_parse_command(self):
#The assumption is that there will be one or two regular files specified
# on command line that are valid image file names
# If there are two, root and ext must be the same in each case.
# In Unix, wildcards are permitted because they are expanded by the shell.
for file in self.arg_module.argv[1:]:
if os.path.isfile(file):
self.interface3_FN_factory(
os.path.abspath(file),
error_message="File name not accepted")
else:
A = url_support.potential_url_request(file)
if file == "data_in_object":
VF = FileName("cxi_data", "present_image_0000001")
VF.number = 1
VF.template = "present_image_#######"
VF.fileroot = "present_image"
self.FN.append(VF)
elif A.is_url_request():
VF = self.interface3_FN_factory(
A.file, error_message="URL %s not accepted" % file)
VF.full_url = A.text
else:
raise Exception("File not found: %s" % file)
def ImageFactory(filename, optional_index=None):
from iotbx.detectors import url_support
from libtbx.utils import Sorry
if os.path.isfile(filename):
if not os.access(filename, os.R_OK):
raise Sorry("No read access to file %s" % filename)
import dxtbx.format.Registry
format_instance = dxtbx.format.Registry.get_format_class_for_file(
filename)
instance = format_instance(filename)
if optional_index is not None:
return instance.get_detectorbase(optional_index)
return instance.get_detectorbase()
A = url_support.potential_url_request(filename)
if A.is_url_request():
for utype in all_url_types:
try:
I = utype(filename)
I.readHeader()
return I
except Exception:
pass
raise ImageException(filename +
" does not work as a functioning image URL")
raise ImageException(filename +
" not recognized as any known detector image type")
def ImageFactory(filename):
from iotbx.detectors import url_support
from libtbx.utils import Sorry
if os.path.isfile(filename):
if not os.access(filename, os.R_OK):
raise Sorry("No read access to file %s" % filename)
from dxtbx.format.Registry import Registry
format_instance = Registry.find(filename)
instance = format_instance(filename)
return instance.get_detectorbase()
A = url_support.potential_url_request(filename)
if A.is_url_request():
for utype in all_url_types:
try:
I = utype(filename)
I.readHeader()
return I
except Exception:
pass
raise ImageException(filename+" does not work as a functioning image URL")
raise ImageException(filename+" not recognized as any known detector image type")
def interface3_parse_command(self):
#The assumption is that there will be one or two regular files specified
# on command line that are valid image file names
# If there are two, root and ext must be the same in each case.
# In Unix, wildcards are permitted because they are expanded by the shell.
for file in self.arg_module.argv[1:]:
if os.path.isfile(file):
self.interface3_FN_factory(os.path.abspath(file),error_message="File name not accepted")
else:
A = url_support.potential_url_request(file)
if file=="data_in_object":
VF = FileName("cxi_data","present_image_0000001")
VF.number = 1
VF.template = "present_image_#######"
VF.fileroot = "present_image"
self.FN.append(VF)
elif A.is_url_request():
VF = self.interface3_FN_factory(A.file,error_message="URL %s not accepted"%file)
VF.full_url = A.text
else:
raise Exception("File not found: %s"%file)