Esempio n. 1
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    'forcecomponent': forces.InputForceComponent(),
    'forces': forces.InputForces(),
    'atoms': atoms.InputAtoms(),
    'beads': beads.InputBeads(),
    'prng': prng.InputRandom(),
    'normalmodes': normalmodes.InputNormalModes(),
    'nmfrequencies': normalmodes.InputNMFrequencies(),
    'init_file': initializer.InputInitFile(),
    'init_pos': initializer.InputInitPositions(),
    'init_mom': initializer.InputInitMomenta(),
    'init_lab': initializer.InputInitLabels(),
    'init_mass': initializer.InputInitMasses(),
    'init_vel': initializer.InputInitVelocities(),
    'init_cell': initializer.InputInitCell(),
    'init_therm': initializer.InputInitThermo(),
    'initializer': initializer.InputInitializer(),
    'output': outputs.InputOutputs(),
    'properties': outputs.InputProperties(),
    'checkpoint': outputs.InputCheckpoint(),
    'trajectory': outputs.InputTrajectory()
}

usage = "usage: python %prog [options]"
parser = OptionParser(usage=usage)
parser.add_option("-x",
                  action="store_true",
                  dest="xml",
                  default=False,
                  help="write an xml help file")
parser.add_option("-l",
                  action="store_true",
Esempio n. 2
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    "forcecomponent": forces.InputForceComponent(),
    "forces": forces.InputForces(),
    "atoms": atoms.InputAtoms(),
    "beads": beads.InputBeads(),
    "prng": prng.InputRandom(),
    "normalmodes": normalmodes.InputNormalModes(),
    "nmfrequencies": normalmodes.InputNMFrequencies(),
    "init_file": initializer.InputInitFile(),
    "init_pos": initializer.InputInitPositions(),
    "init_mom": initializer.InputInitMomenta(),
    "init_lab": initializer.InputInitLabels(),
    "init_mass": initializer.InputInitMasses(),
    "init_vel": initializer.InputInitVelocities(),
    "init_cell": initializer.InputInitCell(),
    "init_therm": initializer.InputInitThermo(),
    "initializer": initializer.InputInitializer(),
    "output": outputs.InputOutputs(),
    "properties": outputs.InputProperties(),
    "checkpoint": outputs.InputCheckpoint(),
    "trajectory": outputs.InputTrajectory(),
}

usage = "usage: python %prog [options]"
parser = OptionParser(usage=usage)
parser.add_option(
    "-x", action="store_true", dest="xml", default=False, help="write an xml help file"
)
parser.add_option(
    "-l",
    action="store_true",
    dest="latex",