def cpanel_visualPreLaunch(model):
self.runButton = runButton(description='Pause', icon='pause')
self.progress = progressBar()
self.postinstruct.layout = Layout(display='none')
self.stopbutton = Button(description='Stop', icon='stop')
self.stopbutton.click = self.model.terminate
pbararea = HBox(
[self.runButton, self.stopbutton, self.progress])
pbararea.add_class('helipad_progress_area')
display(pbararea)
def __init__(self, inputs, targets, indexes=None, keyboard_shortcuts=True):
self.path = ''
self.datamanager = DataManager(inputs, targets, indexes)
slider = IntSlider(min=0, max=0)
self.slider = slider
self.prevbtn = Button(description='< Previous')
self.nextbtn = Button(description='Next >')
self.input_widgets = [
dw.get_widget() for dw in self.datamanager.get_inputs()
]
self.target_widgets = [
dw.get_widget() for dw in self.datamanager.get_targets()
]
self.add_class('innotater-base')
controlbar_widget = HBox([self.prevbtn, slider, self.nextbtn])
controlbar_widget.add_class('innotater-controlbar')
super().__init__([
HBox([VBox(self.input_widgets),
VBox(self.target_widgets)]), controlbar_widget
])
widgets.jslink((slider, 'value'), (self, 'index'))
for dw in self.datamanager.get_targets():
dw.widget_observe(self.update_data, names='value')
if dw.has_children_changed_notifier:
dw.on_children_changed(self.new_children_handler)
for dw in list(self.datamanager.get_all()):
dw.post_widget_create(self.datamanager)
self.prevbtn.on_click(lambda c: self.move_slider(-1))
self.nextbtn.on_click(lambda c: self.move_slider(1))
self.slider.max = self.datamanager.get_data_len() - 1
self.index = 0
self.keyboard_shortcuts = keyboard_shortcuts
self.on_msg(self.handle_message)
self.suspend_observed_changes = False
self.update_ui()
def __init__(self,
inputs,
targets,
indexes=None,
keyboard_shortcuts=True,
save_hook=None):
self.path = ''
self.dirty_uindexes = set()
self.save_hook = save_hook
self.datamanager = DataManager(inputs, targets, indexes)
slider = IntSlider(min=0, max=0)
self.slider = slider
self.prevbtn = Button(description='< Previous')
self.nextbtn = Button(description='Next >')
self.input_widgets = [
dw.get_widget() for dw in self.datamanager.get_inputs()
]
self.target_widgets = [
dw.get_widget() for dw in self.datamanager.get_targets()
]
self.add_class('innotater-base')
cbar_widgets = [self.prevbtn, slider, self.nextbtn]
if self.save_hook:
self.savebtn = Button(description='Save', disabled=True)
cbar_widgets.append(self.savebtn)
controlbar_widget = HBox(cbar_widgets)
controlbar_widget.add_class('innotater-controlbar')
super().__init__([
HBox([VBox(self.input_widgets),
VBox(self.target_widgets)]), controlbar_widget
])
widgets.jslink((slider, 'value'), (self, 'index'))
self._observe_targets(self.datamanager.get_targets())
for dw in list(self.datamanager.get_all()):
dw.post_widget_create(self.datamanager)
self.prevbtn.on_click(lambda c: self.move_slider(-1))
self.nextbtn.on_click(lambda c: self.move_slider(1))
if self.save_hook:
self.savebtn.on_click(lambda c: self.save_hook_fire())
self.slider.max = self.datamanager.get_data_len() - 1
self.index = 0
self.keyboard_shortcuts = keyboard_shortcuts
self.on_msg(self.handle_message)
self.suspend_observed_changes = False
self.update_ui()
class VerboseOptimization(object):
def __init__(self, model, opt, maxiters, verbose=False, current_iteration=0, ipython_notebook=True, clear_after_finish=False):
self.verbose = verbose
if self.verbose:
self.model = model
self.iteration = current_iteration
self.p_iter = self.iteration
self.maxiters = maxiters
self.len_maxiters = len(str(int(maxiters)))
self.opt_name = opt.opt_name
self.opt = opt
self.model.add_observer(self, self.print_status)
self.status = 'running'
self.clear = clear_after_finish
self.update()
try: # pragma: no cover
from IPython.display import display
from ipywidgets import IntProgress, HTML, Box, VBox, HBox
self.text = HTML(width='100%')
self.progress = IntProgress(min=0, max=maxiters)
#self.progresstext = Text(width='100%', disabled=True, value='0/{}'.format(maxiters))
self.model_show = HTML()
self.ipython_notebook = ipython_notebook
get_ipython
except:
# Not in Ipython notebook
self.ipython_notebook = False
if self.ipython_notebook: # pragma: no cover
left_col = VBox(
children=[self.progress, self.text], padding=2, width='40%')
right_col = Box(
children=[self.model_show], padding=2, width='60%')
self.hor_align = HBox(
children=[left_col, right_col], width='100%', orientation='horizontal')
display(self.hor_align)
try:
self.text.set_css('width', '100%')
left_col.set_css({
'padding': '2px',
'width': "100%",
})
right_col.set_css({
'padding': '2px',
})
self.hor_align.set_css({
'width': "100%",
})
self.hor_align.remove_class('vbox')
self.hor_align.add_class('hbox')
left_col.add_class("box-flex1")
right_col.add_class('box-flex0')
except:
pass
# self.text.add_class('box-flex2')
# self.progress.add_class('box-flex1')
else:
self.exps = exponents(self.fnow, self.current_gradient)
print('Running {} Code:'.format(self.opt_name))
print(' {3:7s} {0:{mi}s} {1:11s} {2:11s}'.format(
"i", "f", "|g|", "runtime", mi=self.len_maxiters))
def __enter__(self):
self.start = time.time()
self._time = self.start
return self
def print_out(self, seconds):
if seconds < 60:
ms = (seconds % 1)*100
self.timestring = "{s:0>2d}s{ms:0>2d}".format(
s=int(seconds), ms=int(ms))
else:
m, s = divmod(seconds, 60)
if m > 59:
h, m = divmod(m, 60)
if h > 23:
d, h = divmod(h, 24)
self.timestring = '{d:0>2d}d{h:0>2d}h{m:0>2d}'.format(
m=int(m), h=int(h), d=int(d))
else:
self.timestring = '{h:0>2d}h{m:0>2d}m{s:0>2d}'.format(
m=int(m), s=int(s), h=int(h))
else:
ms = (seconds % 1)*100
self.timestring = '{m:0>2d}m{s:0>2d}s{ms:0>2d}'.format(
m=int(m), s=int(s), ms=int(ms))
if self.ipython_notebook: # pragma: no cover
names_vals = [['optimizer', "{:s}".format(self.opt_name)],
['runtime', "{:>s}".format(self.timestring)],
['evaluation', "{:>0{l}}".format(
self.iteration, l=self.len_maxiters)],
['objective', "{: > 12.3E}".format(self.fnow)],
['||gradient||',
"{: >+12.3E}".format(float(self.current_gradient))],
['status', "{:s}".format(self.status)],
]
#message = "Lik:{:5.3E} Grad:{:5.3E} Lik:{:5.3E} Len:{!s}".format(float(m.log_likelihood()), np.einsum('i,i->', grads, grads), float(m.likelihood.variance), " ".join(["{:3.2E}".format(l) for l in m.kern.lengthscale.values]))
html_begin = """<style type="text/css">
.tg-opt {font-family:"Courier New", Courier, monospace !important;padding:2px 3px;word-break:normal;border-collapse:collapse;border-spacing:0;border-color:#DCDCDC;margin:0px auto;width:100%;}
.tg-opt td{font-family:"Courier New", Courier, monospace !important;font-weight:bold;color:#444;background-color:#F7FDFA;border-style:solid;border-width:1px;overflow:hidden;word-break:normal;border-color:#DCDCDC;}
.tg-opt th{font-family:"Courier New", Courier, monospace !important;font-weight:normal;color:#fff;background-color:#26ADE4;border-style:solid;border-width:1px;overflow:hidden;word-break:normal;border-color:#DCDCDC;}
.tg-opt .tg-left{font-family:"Courier New", Courier, monospace !important;font-weight:normal;text-align:left;}
.tg-opt .tg-right{font-family:"Courier New", Courier, monospace !important;font-weight:normal;text-align:right;}
</style>
<table class="tg-opt">"""
html_end = "</table>"
html_body = ""
for name, val in names_vals:
html_body += "<tr>"
html_body += "<td class='tg-left'>{}</td>".format(name)
html_body += "<td class='tg-right'>{}</td>".format(val)
html_body += "</tr>"
self.text.value = html_begin + html_body + html_end
self.progress.value = (self.iteration+1)
#self.progresstext.value = '0/{}'.format((self.iteration+1))
self.model_show.value = self.model._repr_html_()
else:
n_exps = exponents(self.fnow, self.current_gradient)
if self.iteration - self.p_iter >= 20 * np.random.rand():
a = self.iteration >= self.p_iter * 2.78
b = np.any(n_exps < self.exps)
if a or b:
self.p_iter = self.iteration
print('')
if b:
self.exps = n_exps
print('\r', end=' ')
print('{3:} {0:>0{mi}g} {1:> 12e} {2:> 12e}'.format(self.iteration, float(self.fnow), float(self.current_gradient), "{:>8s}".format(
self.timestring), mi=self.len_maxiters), end=' ') # print 'Iteration:', iteration, ' Objective:', fnow, ' Scale:', beta, '\r',
sys.stdout.flush()
def print_status(self, me, which=None):
self.update()
t = time.time()
seconds = t-self.start
#sys.stdout.write(" "*len(self.message))
if t-self._time > 1. or seconds < .2:
self.print_out(seconds)
self._time = t
self.iteration += 1
def update(self):
self.fnow = self.model.objective_function()
if self.model.obj_grads is not None:
grad = self.model.obj_grads
self.current_gradient = np.dot(grad, grad)
else:
self.current_gradient = np.nan
def finish(self, opt): # pragma: no cover
import warnings
warnings.warn('Finish now automatic, deprecating', DeprecationWarning)
def __exit__(self, type, value, traceback):
if self.verbose:
self.status = self.opt.status
self.stop = time.time()
self.model.remove_observer(self)
self.print_out(self.stop - self.start)
if not self.ipython_notebook:
print()
print('Runtime: {}'.format("{:>9s}".format(self.timestring)))
print('Optimization status: {0}'.format(self.status))
print()
elif self.clear: # pragma: no cover
self.hor_align.close()
else: # pragma: no cover
if 'conv' in self.status.lower():
self.progress.bar_style = 'success'
elif self.iteration >= self.maxiters:
self.progress.bar_style = 'warning'
else:
self.progress.bar_style = 'danger'
def renderParam(param, func, title, val, circle=None):
i = None
if param.type == 'slider':
if isinstance(param.opts, dict):
i = interactive(func,
val=(param.opts['low'], param.opts['high'],
param.opts['step']))
else:
s = interactive(func, val=(0, len(param.opts) - 1, 1))
s.children[0].readout = False
l = Label(value=str(param.opts[0]),
layout=Layout(margin='0 0 0 15px'))
i = HBox([s.children[0], l])
elif param.type == 'check':
i = interactive(func, val=val)
elif param.type == 'menu':
i = interactive(func,
val=[(k[1], k[0]) for k in param.opts.items()])
elif param.type == 'checkentry':
defaults = (
(isinstance(val, param.entryType) or val)
if not (param.name == 'stopafter' and param.event) else
True, #Bool
(str(val) if isinstance(val, param.entryType) else '')
if not (param.name == 'stopafter' and param.event) else
'Event: ' + val #Str
)
i = interactive(func, b=defaults[0], s=defaults[1])
if param.obj is None:
i = HBox(i.children)
i.children[0].layout = Layout(width='150px')
if val == False: i.children[1].disabled = True
i.children[1].description = ''
if param.name == 'stopafter' and param.event:
i.children[0].disabled = True
i.children[1].disabled = True
i.add_class('helipad_checkentry_func')
elif param.type == 'checkgrid':
param.element = {}
for k, v in param.opts.items():
if not isinstance(v, (tuple, list)): v = (v, None)
elif len(v) < 2: v = (v[0], None)
param.element[k] = interactive(param.setVar(k),
val=param.vars[k])
param.element[k].children[0].description = v[0]
param.element[k].children[
0].description_tooltip = v[1] if v[
1] is not None else '' #Not working, not sure why
param.containerElement = HBox(list(param.element.values()))
i = Accordion(children=[param.containerElement])
i.set_title(0, title)
i.add_class('helipad_checkgrid')
if i is not None and param.type != 'checkgrid':
circle = '<span class="helipad_circle" style="background:' + circle.hex + '"></span>' if circle is not None else ''
i.children[0].description = circle + title
i.children[0].style = {
'description_width': 'initial'
} #Don't truncate the label
i.children[
0].description_tooltip = param.desc if param.desc is not None else ''
if param.type == 'slider' and isinstance(param.opts, list):
i.children[1].value = str(val)
if val in param.opts: val = param.opts.index(val)
if param.type != 'checkentry': i.children[0].value = val
return i