def recluster():
"""Relaunch KlustaKwik on the selected clusters."""
# Selected clusters.
cluster_ids = self.manual_clustering.selected
spike_ids = self.selector.select_spikes(cluster_ids)
logger.info("Running KlustaKwik on %d spikes.", len(spike_ids))
spike_clusters, metadata = cluster(self.model,
spike_ids,
num_starting_clusters=10,
)
self.manual_clustering.split(spike_ids, spike_clusters)
def recluster():
"""Relaunch KlustaKwik on the selected clusters."""
# Selected clusters.
cluster_ids = self.manual_clustering.selected
spike_ids = self.selector.select_spikes(cluster_ids)
logger.info("Running KlustaKwik on %d spikes.", len(spike_ids))
# Run KK2 in a temporary directory to avoid side effects.
with TemporaryDirectory() as tempdir:
spike_clusters, metadata = cluster(self.model,
spike_ids,
num_starting_clusters=10,
tempdir=tempdir,
)
self.manual_clustering.split(spike_ids, spike_clusters)
def recluster():
"""Relaunch KlustaKwik on the selected clusters."""
# Selected clusters.
cluster_ids = supervisor.selected
spike_ids = self.selector.select_spikes(cluster_ids)
logger.info("Running KlustaKwik on %d spikes.", len(spike_ids))
# Run KK2 in a temporary directory to avoid side effects.
n = 10
with TemporaryDirectory() as tempdir:
spike_clusters, metadata = cluster(self.model,
spike_ids,
num_starting_clusters=n,
tempdir=tempdir,
)
controller.supervisor.split(spike_ids, spike_clusters)