Esempio n. 1
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    def __init__(self, parent=None, signalManager=None):
        OWRpy.__init__(self)
        self.setRvariableNames(["strptime"])
        self.data = {}
        self.RFunctionParam_x = ''
        self.inputs.addInput("x", _("Input Data"),
                             signals.RDataFrame.RDataFrame, self.processx)
        self.outputs.addOutput("strptime Output", _("strptime Output"),
                               signals.RDataFrame.RDataFrame)

        self.columnSelection = redRcomboBox(self.controlArea,
                                            label=_("Data Column:"))
        self.RFunctionParamformat_comboBox = redRcomboBox(
            self.controlArea,
            label="format:",
            items=[
                _("yyyymmdd"),
                _("yymmdd"),
                _("ddmmyyyy"),
                _("ddmmyy"),
                _("mmddyyyy"),
                _("mmddyy")
            ],
            toolTip=
            _("Select the format of the date time.  y is year m is month and d is day."
              ))
        redRCommitButton(self.bottomAreaRight,
                         "Commit",
                         callback=self.commitFunction)
Esempio n. 2
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    def __init__(self, signalManager=None):
        OWRpy.__init__(self)

        self.setRvariableNames(
            ['score', 'mergedmatrix', 'mergedvals', 'tempmerge'])
        self.data = {}
        self.RFunctionParam_data = ''
        self.RFunctionParam_score = ''
        self.inputs.addInput("data", _("Sample Data"),
                             signals.RDataFrame.RDataFrame, self.processdata)
        self.inputs.addInput("scoremat", _("Scoring Matrix"),
                             signals.RDataFrame.RDataFrame, self.processscores)
        self.outputs.addOutput("fscoremat", _("Sored Samples"),
                               signals.RDataFrame.RDataFrame)
        self.outputs.addOutput("maxScore", _("Max Scored Class"),
                               signals.RVector.RVector)

        wb = redRwidgetBox(self.controlArea, orientation='horizontal')
        self.scoremethod = redRcomboBox(
            wb,
            label=_('Scoring Method'),
            items=[_('Multiplication'), _('Correlation')],
            callback=self.commitFunction)
        redRCommitButton(self.bottomAreaRight,
                         _("Commit"),
                         callback=self.commitFunction)
        self.RoutputWindow = redRfilterTable(wb,
                                             label=_('Scores'),
                                             displayLabel=False,
                                             sortable=True,
                                             filterable=False)
Esempio n. 3
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 def __init__(self, parent=None, signalManager=None):
     OWRpy.__init__(self)
     self.setRvariableNames(["rbind"])
     self.data = {}
     self.RFunctionParam_x = ''
     self.inputs.addInput(
         "x",
         _("Data"),
         [signals.RDataFrame.RDataFrame, signals.RVector.RVector],
         self.processx,
         multiple=True)
     self.outputs.addOutput("rbind Output", _("Joined Data"),
                            signals.RDataFrame.RDataFrame)
     self.rowcolnames = redRcomboBox(
         self.controlArea,
         label=_('Source of Row / Column Names:'),
         callback=self.commitFunction)
     self.bindingMode = redRRadioButtons(self.controlArea,
                                         label=_('Binding Mode:'),
                                         buttons=[_('Row'),
                                                  _('Column')],
                                         setChecked=_('Row'))
     self.RFunctionParamdeparse_level_lineEdit = redRlineEdit(
         self.controlArea, label=_("Deparse Level:"), text='1')
     redRCommitButton(self.bottomAreaRight,
                      _("Commit"),
                      callback=self.commitFunction)
Esempio n. 4
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    def __init__(self, parent=None, signalManager=None):
        OWRpy.__init__(self)
        self.require_librarys(["caret"])
        self.setRvariableNames(["train", 'tempData'])
        self.data = {}
        self.RFunctionParam_data = ''
        self.inputs.addInput("data", "data", [
            signals.RArbitraryList.RArbitraryList,
            signals.RDataFrame.RDataFrame
        ], self.processdata)
        self.outputs.addOutput("train Output", "train Output",
                               signals.RModelFit.RModelFit)

        self.trainingData = redRcomboBox(self.controlArea,
                                         label='Training Data:')
        self.RFunctionParamcustomArgs_lineEdit = redRlineEdit(
            self.controlArea, label="customArgs:", text='')
        #self.RFunctionParamtrControl_lineEdit = redRlineEdit(self.controlArea, label = "trControl:", text = '')
        self.RFunctionParammethod_comboBox = redRcomboBox(
            self.controlArea,
            label="Method:",
            items=[
                "ada", "bagEarth", "bagFDA", "blackboost", "cforest", "ctree",
                "ctree2", "earth", "enet", "fda", "gamboost", "gaussprPoly",
                "gaussprRadial", "gaussprLinear", "gbm", "glm", "glmboost",
                "glmnet", "gpls", "J48", "JRip", "knn", "lars", "lasso", "lda",
                "Linda", "lm", "lmStepAIC", "LMT", "logitBoost", "lssvmPoly",
                "lssvmRadial", "lvq", "M5Rules", "mda", "multinom", "nb",
                "nnet", "nodeHarvest", "OneR", "pam", "pcaNNet", "pcr", "pda",
                "pda2", "penalized", "pls", "ppr", "qda", "QdaCov", "rda",
                "rf", "rlm", "rpart", "rvmLinear", "rvmPoly", "rvmRadial",
                "sda", "sddaLDA", "sddaQDA", "slda", "smda", "sparseLDA",
                "spls", "stepLDA", "stepQDA", "superpc", "svmPoly",
                "svmRadial", "svmLinear", "treebag", "vbmpRadial"
            ])
        #self.formula = redRRFormulaEntry(self.controlArea)
        self.resultVariable = redRcomboBox(self.controlArea,
                                           label='Class Data:')
        self.RFunctionParamform_lineEdit = redRlineEdit(self.controlArea,
                                                        label="form:",
                                                        text='')
        self.RoutputWindow = redRtextEdit(self.controlArea,
                                          label="R Output Window")
        redRCommitButton(self.bottomAreaRight,
                         "Commit",
                         callback=self.commitFunction)
Esempio n. 5
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 def __init__(self, parent=None, signalManager=None):
     OWRpy.__init__(self)
     self.require_librarys(["caret"])
     self.setRvariableNames(["createDataPartition", 'dataOutputList'])
     self.data = {}
     self.RFunctionParam_y = ''
     self.inputs.addInput("y", "Input Vector List", signals.RDataFrame.RDataFrame, self.processy)
     self.outputs.addOutput("createDataPartition Output","Partition/Resample/Fold List", signals.RList.RList)
     self.outputs.addOutput("dataOutputList", "Data Output List \n(Subsets of data that matches the partitioning)", signals.RList.RList)
     
     self.ListElementCombo = redRcomboBox(self.controlArea, label = 'List Element (Vector):')
     self.functionCombo = redRcomboBox(self.controlArea, label = 'Function:', items = ['Partition', 'Resample', 'Fold'])
     self.RFunctionParamp_spinBox = redRSpinBox(self.controlArea, label = "Percentage (Partition):", value = 50, min = 1, max = 100)
     #self.RFunctionParamlist_radioButtons = redRradioButtons(self.controlArea, label = "list:", buttons = ["TRUE"], setChecked = "")
     self.RFunctionParamgroups_spinBox = redRSpinBox(self.controlArea, label = "Number of Quantiles (Partition on Numeric Data):", value = 5, min = 1)
     self.RFunctionParamtimes_spinBox = redRSpinBox(self.controlArea, label = "Number of Partitions (Partition and Resample):", value = 1, min = 1, toolTip = 'Typically higher values are set for resampling because one wants to generate several resamples at once.')
     self.RFunctionParam_folds_spinBox = redRSpinBox(self.controlArea, label = "Number of Folds (Folds):", value = 10, min = 1)
     redRCommitButton(self.bottomAreaRight, "Commit", callback = self.commitFunction)
     self.RoutputWindow = redRtextEdit(self.controlArea, label = "R Output Window")
Esempio n. 6
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    def __init__(self, parent=None, signalManager=None):
        OWRpy.__init__(self)
        self.setRvariableNames(["predict", 'tempData'])
        self.data = {}
        self.RFunctionParam_object = ''
        self.RFunctionParam_newData = ''
        self.inputs.addInput("object", "object", signals.RModelFit.RModelFit,
                             self.processobject)
        self.inputs.addInput("newData", "newData", [
            signals.RArbitraryList.RArbitraryList,
            signals.RDataFrame.RDataFrame
        ], self.processnewData)
        self.outputs.addOutput("predict Output", "predict Output",
                               signals.RModelFit.RModelFit)

        self.testData = redRcomboBox(self.controlArea, label='Test Data:')
        self.classLabels = redRcomboBox(self.controlArea,
                                        label='Class Labels:')
        redRCommitButton(self.bottomAreaRight,
                         "Commit",
                         callback=self.commitFunction)
        self.RoutputWindow = redRtextEdit(self.controlArea,
                                          label="R Output Window")
Esempio n. 7
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 def __init__(self, parent=None, signalManager=None):
     OWRpy.__init__(self)
     self.RFunctionParam_height = ''
     self.inputs.addInput("height", "Plotting Vector", signals.RList.RList, self.processheight)
     
     self.RFunctionParammain_lineEdit = redRlineEdit(self.controlArea, label = "main:", text = '')
     self.RFunctionParamhoriz_lineEdit = redRlineEdit(self.controlArea, label = "horiz:", text = '')
     self.namesBox = redRcomboBox(self.controlArea, label = 'Data Element:', callback = self.commitFunction)
     self.RFunctionParamspace_lineEdit = redRSpinBox(self.controlArea, label = "Space:", 
     min = 0, max = 99, value = 5)
     self.RFunctionParamxlab_lineEdit = redRlineEdit(self.controlArea, label = "xlab:", text = '')
     self.plotArea = redRgraphicsView(self.controlArea,label='Bar Plot', displayLabel=False)
     
     self.commit = redRCommitButton(self.bottomAreaRight, "Commit", callback = self.commitFunction,
     processOnInput=True)
Esempio n. 8
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 def __init__(self, parent=None, signalManager=None):
     OWRpy.__init__(self)
     self.setRvariableNames(["melt"])
     self.require_librarys(["reshape"])
     self.data = {}
     self.RFunctionParam_data = ''
     self.inputs.addInput("data", "Data Table", signals.RDataFrame.RDataFrame, self.processdata)
     self.outputs.addOutput("melt Output","Molten Data", signals.RDataFrame.RDataFrame)
     
     self.RFunctionParamna_rm_radioButtons = redRradioButtons(self.controlArea, label = "Remove NA's:", buttons = ["TRUE","FALSE"], setChecked = "TRUE")
     self.RFunctionParammeasure_vars_comboBox = redRcomboBox(self.controlArea, label = "Measure Variables (Values):")
     self.RFunctionParamvariable_name_lineEdit = redRlineEdit(self.controlArea, label = "New Variable Column Name:", text = 'variable')
     self.RFunctionParamid_vars_listBox = redRListBox(self.controlArea, label = "id_vars:")
     self.RFunctionParamid_vars_listBox.setSelectionMode(QAbstractItemView.ExtendedSelection)
     redRCommitButton(self.bottomAreaRight, "Commit", callback = self.commitFunction)
     self.RoutputWindow = redRtextEdit(self.controlArea, label = "R Output Window")
Esempio n. 9
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    def __init__(self, parent=None, signalManager=None):
        OWRpy.__init__(self)
        self.require_librarys(["caret"])
        self.setRvariableNames(["preProcess", 'preProcess_values'])
        self.data = {}
        self.RFunctionParam_x = ''
        self.inputs.addInput("x", "x", signals.RList.RList, self.processx)
        self.outputs.addOutput("preProcess Output", "preProcess Output",
                               signals.RModelFit.RModelFit)
        self.outputs.addOutput('preProcess_values', 'Processed Values',
                               signals.RList.RList)

        self.trainingElement = redRcomboBox(self.controlArea,
                                            lable='Training Dataset:')
        self.RFunctionParamthresh_spinBox = redRSpinBox(
            self.controlArea,
            label="Threshold (PCA):",
            value=95,
            min=1,
            max=99)
        self.RFunctionParammethod_listBox = redRListBox(
            self.controlArea,
            label="Method:",
            items=["center", "scale", "pca", "spatilaSign"],
            toolTip=
            'Select the options to be applied to the data.  If nothing is selected then center and scale will be applied by default'
        )
        for i in range(self.RFunctionParammethod_listBox.count()):
            if unicode(self.RFunctionParammethod_listBox.item(i).text()) in [
                    'center', 'scale'
            ]:
                self.RFunctionParammethod_listBox.setItemSelected(
                    self.RFunctionParammethod_listBox.item(i), True)

        redRCommitButton(self.bottomAreaRight,
                         "Commit",
                         callback=self.commitFunction)
Esempio n. 10
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    def __init__(self, parent=None, signalManager=None):
        OWRpy.__init__(self)
        self.setRvariableNames(["cast"])
        self.data = {}
        self.require_librarys(["reshape"])
        self.RFunctionParam_data = ''
        self.inputs.addInput("data", "Molten Data",
                             signals.RDataFrame.RDataFrame, self.processdata)
        self.outputs.addOutput("cast Output", "Reshaped Data",
                               signals.RDataFrame.RDataFrame)

        self.RFunctionParamformula_listBox = redRListBox(
            self.controlArea, label="Reshape Variables:")
        self.RFunctionParamformula_listBox.setSelectionMode(
            QAbstractItemView.ExtendedSelection)
        self.RFunctionParamfun_aggregate_lineEdit = redRcomboBox(
            self.controlArea,
            label="Aggregating Function:",
            items=['NULL', 'mean', 'median', 'mode', 'range'])
        redRCommitButton(self.bottomAreaRight,
                         "Commit",
                         callback=self.commitFunction)
        self.RoutputWindow = redRtextEdit(self.controlArea,
                                          label="R Output Window")
Esempio n. 11
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    def __init__(self, parent=None, signalManager=None):
        #Here we init the parent class of our widget OWRpy.
        OWRpy.__init__(self)
        
        #create a R variable cor in the R session.
        #the output variable will not conflict with some other widgets variables
        self.setRvariableNames(["distri"])

        # Define the outputs of this widget
        self.outputs.addOutput('id0', 'Results', redRRVector)

        
        #START THE GUI LAYOUT
        area = widgetBox(self.controlArea,orientation='horizontal')       
        options = widgetBox(area,orientation='vertical')
        area.layout().setAlignment(options,Qt.AlignTop)
        self.count = RedRSpinBox(options, label='# Observations to Generate', min = 0,max=60000000, value = 10)
        
        self.methodButtons = redRcomboBox(options,  label = "Distributions", 
        items = [("rnorm", "Normal"),
        ('rbeta','Beta'),
        ('rbinom','Binomial'),
        ('rcauchy','Cauchy'),
        ('rchisq','Chi Square'),
        ('rexp','Exponential'),
        ('rf','F'),
        ('rgamma','Gamma') ],
        editable=True, callback = self.onDistChange)
        
        textBoxWidth = 70
        self.distOptions = widgetBox(options)
        self.normalDist = groupBox(self.distOptions,label='Normal Distribution')
        self.normMean = redRlineEdit(self.normalDist, label='Mean',id='mean', text='0', width=textBoxWidth)
        self.normSD = redRlineEdit(self.normalDist, label='Standard Deviations',id='sd', text='1',width=textBoxWidth)
        
        self.betaDist = groupBox(self.distOptions,label='Beta Distribution')
        self.betaShape1 = redRlineEdit(self.betaDist, label='Shape 1', id='shape1', width=textBoxWidth,text='1')
        self.betaShape2 = redRlineEdit(self.betaDist, label='Shape 2', id='shape2', width=textBoxWidth,text='1')
        self.betaNCP = redRlineEdit(self.betaDist, label='Non-centrality', id='ncp', width=textBoxWidth,text='0')
        self.betaDist.hide()

        
        self.binomDist = groupBox(self.distOptions,label='Binomial Distribution')
        self.binomSize = redRlineEdit(self.binomDist, label='Size', id='size', width=textBoxWidth,text='1')
        self.binomProb = redRlineEdit(self.binomDist, label='Probability', id='prob', width=textBoxWidth,text='.5')
        self.binomDist.hide()
        
        
        self.cauchyDist = groupBox(self.distOptions,label='Cauchy Distribution')
        self.cauchyLocation = redRlineEdit(self.cauchyDist, label='Location', id='location', width=textBoxWidth,text='0')
        self.cauchyScale = redRlineEdit(self.cauchyDist, label='Scale', id='scale', width=textBoxWidth,text='1')
        self.cauchyDist.hide()
        
        self.gammaDist = groupBox(self.distOptions,label='Gamma Distribution')
        self.gammaShape = redRlineEdit(self.gammaDist, label='Shape', id='location', width=textBoxWidth,text='1')
        self.gammaRate = redRlineEdit(self.gammaDist, label='Rate', id='scale', width=textBoxWidth,text='1')
        self.gammaScale = redRlineEdit(self.gammaDist, label='Scale', id='scale', width=textBoxWidth,text='.5')
        self.gammaDist.hide()
        
        self.chiDist = groupBox(self.distOptions,label='Chi Square Distribution')
        self.chiDF = redRlineEdit(self.chiDist, label='Degrees of Freedom', id='df', width=textBoxWidth,text='1')
        self.chiNCP = redRlineEdit(self.chiDist, label='Non-centrality', id='ncp', width=textBoxWidth,text='0')
        self.chiDist.hide()
        
        self.fDist = groupBox(self.distOptions,label='F Distribution')
        self.fDF1 = redRlineEdit(self.fDist, label='Degrees of Freedom 1', id='df1', width=textBoxWidth,text='1')
        self.fDF2 = redRlineEdit(self.fDist, label='Degrees of Freedom 2', id='df2', width=textBoxWidth,text='1')
        self.fNCP = redRlineEdit(self.fDist, label='Non-centrality', id='ncp', width=textBoxWidth,text='0')
        self.fDist.hide()
        
        self.expDist = groupBox(self.distOptions,label='Exponential Distribution')
        self.expRate = redRlineEdit(self.expDist, label='Rate ', id='rate', width=textBoxWidth,text='1')
        self.expDist.hide()
        
        commit = redRCommitButton(options, "Commit", toolTip='Calculate values', callback = self.commitFunction)
        options.layout().setAlignment(commit, Qt.AlignRight)