],
# What snapshots to compile the particle tracks for.
'snum_start': 1,
'snum_end': 600,
'snum_step': 1,
},
# Arguments used for the visualization step
'visualization_kwargs': {
# These kwargs are used for tuning the Firefly visualization
'export_to_firefly_kwargs': {
'firefly_dir': '$SCRATCH/firefly_repos/firefly_trails',
},
},
# The following arguments are for turning on/off different parts
# of the pipeline
'run_id_selecting': False,
# Most users will identify the list of IDs using their own methods, so
# we turn ID selecting off.
'run_id_sampling': False,
'run_tracking': False,
'run_galaxy_linking': False,
'run_classifying': False,
'run_visualization': True,
}
# Actually run Linefinder
linefinder.run_linefinder_jug(**linefinder_args)
'snum_end': 600,
'snum_step': 1,
}
# Galaxy-Linking Parameters
gal_linker_kwargs = {
'ids_to_return': ['gal_id', 'd_gal'],
'halo_data_dir':
'/scratch/projects/xsede/GalaxiesOnFIRE/core/m12i_res7100/halo/rockstar_dm/catalog',
'halo_finder': 'Rockstar',
'minimum_criteria': 'M200b',
'minimum_value': 1e4,
'length_scale': 'Rs',
'galaxy_cut': 5,
}
# This is the actual function that runs linefinder.
# In general you don't need to touch this function but if you want to,
# for example, turn off one of the steps because you're rerunning and you
# already did that step, you can do so below.
linefinder.run_linefinder_jug(
sim_name=sim_name,
tag=tag,
tracker_kwargs=tracker_kwargs,
run_id_selecting=False,
# run_id_sampling = False,
# run_tracking = False,
# run_galaxy_linking = False,
run_classifying=False,
)
'logZ',
'logDen',
'vr_div_v_cool',
'logvr_div_v_cool_offset',
],
'tracked_filter_flags': [ True, ] * 5,
'tracked_colormap_flags': [ True, ] * 5,
'snum': 465,
},
}
# This is the actual function that runs linefinder.
# In general you don't need to touch this function but if you want to,
# for example, turn off one of the steps because you're rerunning and you
# already did that step, you can do so below.
linefinder.run_linefinder_jug(
sim_name = sim_name,
tag = tag,
galdef = '_galdefv3',
# The galdef is a set of parameters used for the galaxy linking and
# classification steps. Don't touch this unless you know what you're doing.
tracker_kwargs = tracker_kwargs,
sampler_kwargs = sampler_kwargs,
visualization_kwargs = visualization_kwargs,
run_id_selecting = False,
run_id_sampling = False,
run_tracking = False,
run_galaxy_linking = False,
run_classifying = False,
)
'classification_ui_labels': [ 'All', 'IGMAcc', 'Wind', 'SatWind', 'Sat' ],
'tracked_properties': [
'logT',
'logZ',
'logDen',
'vr_div_v_cool',
'logvr_div_v_cool_offset',
],
'tracked_filter_flags': [ True, ] * 5,
'tracked_colormap_flags': [ True, ] * 5,
},
}
linefinder.run_linefinder_jug(
sim_name = sim_name,
tag = tag,
selector_data_filters = selector_data_filters,
selector_kwargs = selector_kwargs,
sampler_kwargs = sampler_kwargs,
tracker_kwargs = tracker_kwargs,
gal_linker_kwargs = gal_linker_kwargs,
classifier_kwargs = classifier_kwargs,
visualization_kwargs = visualization_kwargs,
run_id_selecting = False,
run_id_sampling = False,
run_tracking = False,
run_galaxy_linking = False,
run_classifying = True,
run_visualization = False,
)
'n_samples': 2,
}
# Tracking Parameters
tracker_kwargs = {
'sdir': sdir,
}
# Galaxy Finding Parameters
gal_linker_kwargs = {
'halo_data_dir': halo_data_dir,
'main_mt_halo_id': 0,
'length_scale': 'Rvir',
'mt_length_scale': 'Rvir',
}
# Classifying Parameters
classifier_kwargs = {
'velocity_scale': 'Vc(Rvir)',
}
linefinder.run_linefinder_jug(
out_dir=out_dir,
tag=tag,
selector_kwargs=selector_kwargs,
sampler_kwargs=sampler_kwargs,
tracker_kwargs=tracker_kwargs,
gal_linker_kwargs=gal_linker_kwargs,
classifier_kwargs=classifier_kwargs,
)