Esempio n. 1
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def load_globals(config):
    import mapreduce as GLOBAL  # access to global variables
    GLOBAL.DATA = GLOBAL.load_data(config["data"])
    STRUCTURE = nibabel.load(config["structure"])
    A, _ = tv_helper.A_from_mask(STRUCTURE.get_data())
    GLOBAL.A, GLOBAL.STRUCTURE = A, STRUCTURE
Esempio n. 2
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def load_globals(config):
    import mapreduce as GLOBAL  # access to global variables
    GLOBAL.DATA = GLOBAL.load_data(config["data"])
Esempio n. 3
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def resample(config, resample_nb):
    import mapreduce as GLOBAL  # access to global variables
    GLOBAL.DATA = GLOBAL.load_data(config["data"])
    resample = config["resample"][resample_nb]
    GLOBAL.DATA_RESAMPLED = {k: [GLOBAL.DATA[k][idx, ...] for idx in resample]
                            for k in GLOBAL.DATA}
Esempio n. 4
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def load_globals(config):
    import mapreduce as GLOBAL  # access to global variables
    print "start load_globals"
    GLOBAL.DATA = GLOBAL.load_data(config["data"])
    print "finished load_globals"
Esempio n. 5
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def load_globals(config):
    import mapreduce as GLOBAL  # access to global variables
    GLOBAL.DATA = GLOBAL.load_data(config["data"])
    A = LinearOperatorNesterov(filename=config["structure_linear_operator_tv"])
    GLOBAL.A = A
Esempio n. 6
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def load_globals(config):
    import mapreduce as GLOBAL
    GLOBAL.DATA = GLOBAL.load_data(config['data'])
Esempio n. 7
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def load_globals(config):
    import mapreduce as GLOBAL  # access to global variables
    GLOBAL.DATA = GLOBAL.load_data(config["data"])
    N_COMP = config["n_comp"]
    GLOBAL.N_COMP = N_COMP
    GLOBAL.OUTPUT_DIR = config["output_dir"]
Esempio n. 8
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def load_globals(config):
    import mapreduce as GLOBAL  # access to global variables
    GLOBAL.DATA = GLOBAL.load_data(config["data"])
    STRUCTURE = nibabel.load(config["mask_filename"])
    A = tv_helper.A_from_mask(STRUCTURE.get_data())
    GLOBAL.A, GLOBAL.STRUCTURE, GLOBAL.CONFIG = A, STRUCTURE, config
def load_globals(config):
    import mapreduce as GLOBAL  # access to global variables
    GLOBAL.DATA = GLOBAL.load_data(config["data"])
    GLOBAL.DATA["X"] = GLOBAL.DATA["X"][:, 0:3]
    GLOBAL.MODALITY = config["modality"]
Esempio n. 10
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def load_globals(config):
    import mapreduce as GLOBAL  # access to global variables
    GLOBAL.DATA = GLOBAL.load_data(config["data"])
    Atv = LinearOperatorNesterov(filename=config["structure_linear_operator_tv"])
    GLOBAL.Atv = Atv
    GLOBAL.FULL_RESAMPLE = config['full_resample']