Chris Brown [email protected] """ # python modules import os import sys import argparse import numpy as np from scipy import signal from itertools import cycle, product # plotting modules from matplotlib import use as mplUse mplUse('Agg') import matplotlib.pyplot as plt from matplotlib.backends.backend_pdf import PdfPages plt.rcParams['pdf.fonttype'] = 42 from matplotlib import rc rc('font', **{'family': 'sans-serif', 'sans-serif': ['Helvetica']}) # ctb from ctbBio.fasta import iterate_fasta as parse_fasta def plot_two(title, subtitle, A, B, labels, legend, vert=False): """ plot with differnt y axes title = title for chart A = data for left axis [[x], [y]]
libLiFFT is free software: you can redistribute it and/or modify
it under the terms of the GNU Lesser General Public License as
published by the Free Software Foundation, either version 3 of the
License, or (at your option) any later version.
libLiFFT is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU Lesser General Public License for more details.
You should have received a copy of the GNU Lesser General Public
License along with libLiFFT. If not, see <www.gnu.org/licenses/>.
"""
from matplotlib import use as mplUse
mplUse('Agg')
from matplotlib import cm
from matplotlib import pyplot as plt
from matplotlib.colors import LogNorm
import numpy as np
import sys
import argparse
delta_x = 1.
delta_y = 1.
def drawGraphic(data, figure, xLabel = None, yLabel = None, title = None, logPlot = True, extent = None):
if logPlot:
norm = LogNorm()
else: