def test_left_after_transcript(self, tranverse_trans_rev_setup):
gpos = tranverse_trans_rev_setup.trans_evidence.traverse(2200, 100, ORIENT.LEFT)
assert GenomeEvidence.traverse(2200, 100, ORIENT.LEFT) == gpos
assert gpos == Interval(2100)
def test_left_after_transcript(self):
gpos = self.trans_evidence.traverse(2200, 100, ORIENT.LEFT)
self.assertEqual(gpos, GenomeEvidence.traverse(2200, 100, ORIENT.LEFT))
self.assertEqual(Interval(2100), gpos)
def test_left_before_transcript(self, tranverse_trans_rev_setup):
gpos = tranverse_trans_rev_setup.trans_evidence.traverse(900, 500 - 1, ORIENT.LEFT)
assert gpos == Interval(401)
assert GenomeEvidence.traverse(900, 500 - 1, ORIENT.LEFT) == gpos
def test_left_before_transcript(self):
gpos = self.trans_evidence.traverse(900, 500 - 1, ORIENT.LEFT)
self.assertEqual(Interval(401), gpos)
self.assertEqual(gpos,
GenomeEvidence.traverse(900, 500 - 1, ORIENT.LEFT))
