def edit_filters():
"""Edit saved filters."""
sample_filters = order_sample_filters()
sample_filter_counts = {}
for sfg in sample_filters:
sample_filter_counts[sfg] = {}
for sf in sample_filters[sfg]:
sample_filter_counts[sf['id']] = get_samples(filters=sf['id'],
count=True)
return render_template('users/organize_filters.html',
sample_filters=sample_filters,
sample_filter_counts=sample_filter_counts,
user_token=current_user.api_token,
num_samples=get_samples(count=True))
def get_report_plot(user, *args, **kwargs):
data = request.get_json()
plot_type = data.get("plot_type")
filters = data.get("filters", [])
sample_names = get_samples(filters)
html = generate_report_plot(plot_type, sample_names)
return jsonify({'success': True, 'plot': html})
def home():
"""Home page."""
return render_template(
'public/home.html',
num_samples = get_samples(count=True),
num_reports = get_reports_data(count=True),
num_uploads_processing = get_queued_uploads(count=True, filter_cats=["NOT TREATED", "IN TREATMENT"])
)
def edit_filters():
"""
Edit saved filters.
"""
sample_filters = order_sample_filters()
sample_filter_counts = {}
for sfg in sample_filters:
sample_filter_counts[sfg] = {}
for sf in sample_filters[sfg]:
sample_filter_counts[sf["id"]] = get_samples(
filters=sf.get("sample_filter_data", []), count=True
)
return render_template(
"users/organize_filters.html",
sample_filters=sample_filters,
sample_filter_counts=sample_filter_counts,
user_token=current_user.api_token,
num_samples=get_samples(count=True),
)
def choose_plot_type():
"""Choose plot type."""
return render_template('public/plot_type.html',
num_samples=get_samples(count=True))
def home():
"""Home page."""
return render_template('public/home.html',
num_samples=get_samples(count=True),
num_reports=get_reports_data(count=True))
def count_samples(user, *args, **kwargs):
data = request.get_json()
filters = data.get("filters", [])
count = get_samples(filters, count=True)
return jsonify({'success': True, 'count': count})
