def plot_obs_freq(predictor_matrix, code):
coastline = mv.mcoast(map_coastline_thickness=2,
map_boundaries="on",
map_coastline_colour="chestnut")
symbol = mv.msymb(
legend="on",
symbol_type="marker",
symbol_table_mode="on",
symbol_outline="on",
symbol_min_table=[1, 2, 5, 10, 15, 20, 25, 30],
symbol_max_table=[2, 5, 10, 15, 20, 25, 30, 100000],
symbol_colour_table=[
"RGB(0.7020,0.7020,0.7020)",
"RGB(0.4039,0.4039,0.4039)",
"blue",
"RGB(0.4980,1.0000,0.0000)",
"RGB(1.0000,0.8549,0.0000)",
"orange",
"red",
"magenta",
],
symbol_marker_table=15,
symbol_height_table=0.3,
)
legend = mv.mlegend(
legend_text_font="arial",
legend_text_font_size=0.35,
legend_entry_plot_direction="row",
legend_box_blanking="on",
legend_entry_text_width=50,
)
title = mv.mtext(
text_line_count=4,
text_line_1=
"OBS Frequency", # To sostitute with "FE" values when relevant.
text_line_2=f"WT Code = {code}",
text_line_4=" ",
text_font="arial",
text_font_size=0.4,
)
df = predictor_matrix[["LonOBS", "LatOBS", "OBS"]]
grouped_df = df.groupby(["LatOBS", "LonOBS"], as_index=False).count()
geo = mv.create_geo(len(grouped_df), "xyv")
geo = mv.set_latitudes(geo, grouped_df["LatOBS"].to_numpy(dtype=np.float))
geo = mv.set_longitudes(geo, grouped_df["LonOBS"].to_numpy(dtype=np.float))
geo = mv.set_values(geo, grouped_df["OBS"].to_numpy(dtype=np.float))
with NamedTemporaryFile(delete=False, suffix=".pdf") as pdf:
pdf_obj = mv.pdf_output(output_name=pdf.name.replace(".pdf", ""))
mv.setoutput(pdf_obj)
mv.plot(coastline, symbol, legend, title, geo)
return pdf.name
def plot_std(predictor_matrix, code):
coastline = mv.mcoast(map_coastline_thickness=2,
map_boundaries="on",
map_coastline_colour="chestnut")
symbol = mv.msymb(
legend="on",
symbol_type="marker",
symbol_table_mode="on",
symbol_outline="on",
symbol_min_table=[0, 0.0001, 0.5, 1, 2, 5],
symbol_max_table=[0.0001, 0.5, 1, 2, 5, 1000],
symbol_colour_table=[
"RGB(0.7020,0.7020,0.7020)",
"RGB(0.2973,0.2973,0.9498)",
"RGB(0.1521,0.6558,0.5970)",
"RGB(1.0000,0.6902,0.0000)",
"red",
"RGB(1.0000,0.0000,1.0000)",
],
symbol_marker_table=15,
symbol_height_table=0.3,
)
legend = mv.mlegend(
legend_text_font="arial",
legend_text_font_size=0.35,
legend_entry_plot_direction="row",
legend_box_blanking="on",
legend_entry_text_width=50,
)
error = "FER" if "FER" in predictor_matrix.columns else "FE"
title = mv.mtext(
text_line_count=4,
text_line_1=f"{error} Standard Deviation",
text_line_2=f"WT Code = {code}",
text_line_4=" ",
text_font="arial",
text_font_size=0.4,
)
df = predictor_matrix[["LonOBS", "LatOBS", error]]
grouped_df = df.groupby(["LatOBS", "LonOBS"])[error].mean().reset_index()
geo = mv.create_geo(len(grouped_df), "xyv")
geo = mv.set_latitudes(geo, grouped_df["LatOBS"].to_numpy(dtype=np.float))
geo = mv.set_longitudes(geo, grouped_df["LonOBS"].to_numpy(dtype=np.float))
geo = mv.set_values(geo, grouped_df[error].to_numpy(dtype=np.float))
with NamedTemporaryFile(delete=False, suffix=".pdf") as pdf:
pdf_obj = mv.pdf_output(output_name=pdf.name.replace(".pdf", ""))
mv.setoutput(pdf_obj)
mv.plot(coastline, symbol, legend, title, geo)
return pdf.name
def max_of(cls, *args):
if len(args) == 0:
raise Exception
term_1 = args[0]
values = reduce(np.maximum, (arg.values for arg in args))
mv_fieldset = metview.set_values(term_1, values)
mv_fieldset.__class__ = cls
return mv_fieldset
def plot_avg(predictor_matrix, code):
coastline = mv.mcoast(map_coastline_thickness=2,
map_boundaries="on",
map_coastline_colour="chestnut")
symbol = mv.msymb(
legend="on",
symbol_type="marker",
symbol_table_mode="on",
symbol_outline="on",
symbol_min_table=[-1, -0.25, 0.25, 2],
symbol_max_table=[-0.025, 0.25, 2, 1000],
symbol_colour_table=[
"RGB(0.0000,0.5490,0.1882)",
"black",
"RGB(1.0000,0.6902,0.0000)",
"red",
],
symbol_marker_table=15,
symbol_height_table=0.3,
)
legend = mv.mlegend(
legend_text_font="arial",
legend_text_font_size=0.35,
legend_entry_plot_direction="row",
legend_box_blanking="on",
legend_entry_text_width=50,
)
error = "FER" if "FER" in predictor_matrix.columns else "FE"
title = mv.mtext(
text_line_count=4,
text_line_1=f"{error} Mean",
text_line_2=f"WT Code = {code}",
text_line_4=" ",
text_font="arial",
text_font_size=0.4,
)
df = predictor_matrix[["LonOBS", "LatOBS", error]]
grouped_df = df.groupby(["LatOBS", "LonOBS"])[error].mean().reset_index()
geo = mv.create_geo(len(grouped_df), "xyv")
geo = mv.set_latitudes(geo, grouped_df["LatOBS"].to_numpy(dtype=np.float))
geo = mv.set_longitudes(geo, grouped_df["LonOBS"].to_numpy(dtype=np.float))
geo = mv.set_values(geo, grouped_df[error].to_numpy(dtype=np.float))
return plot_geo(geo, coastline, symbol, legend, title)
def vector_of(cls, *args):
"""
classmethod to compute the vector of sequence of Fieldset instances.
:param args: (Tuple[Fieldset]) Sequence of Fieldset instances.
:return: New `Fieldset` instance containing the vector value
:rtype: Fieldset
"""
if len(args) == 0:
raise Exception
term_1 = args[0]
sum_squared_values = sum(abs(term.values)**2 for term in args)
values = np.sqrt(sum_squared_values)
mv_fieldset = metview.set_values(term_1, values)
mv_fieldset.__class__ = cls
return mv_fieldset