def setUp(self):
super(TestViralLoadRequisition, self).setUp()
self.maternal_eligibility = MaternalEligibilityFactory()
self.maternal_consent = MaternalConsentFactory(
registered_subject=self.maternal_eligibility.registered_subject)
self.registered_subject = self.maternal_eligibility.registered_subject
PostnatalEnrollmentFactory(registered_subject=self.registered_subject,
current_hiv_status=POS,
evidence_hiv_status=YES,
rapid_test_done=NOT_APPLICABLE)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='1000M')
self.maternal_visit = MaternalVisitFactory(
appointment=self.appointment)
def test_viral_load_meta_data_for_pos(self):
labs = ['Viral Load']
maternal_visits = [
'2000M', '2010M', '2030M', '2060M', '2090M', '2120M'
]
for visit in maternal_visits:
appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code=visit)
visit = MaternalVisitFactory(appointment=appointment)
for mylab in labs:
lab_entry = LabEntry.objects.get(
model_name=mylab,
visit_definition_id=appointment.visit_definition_id)
lab_meta_data = RequisitionMetaData.objects.get(
lab_entry=lab_entry, appointment=appointment)
self.assertEqual(lab_meta_data.entry_status, 'NEW')
def test_offstudy3(self):
PostnatalEnrollmentFactory(
registered_subject=self.registered_subject,
current_hiv_status=NEG,
evidence_hiv_status=YES,
rapid_test_done=YES,
rapid_test_result=NEG)
post_natal_visit_schedule = site_visit_schedules.get_visit_schedule('postnatal visit schedule')
self.assertEqual(Appointment.objects.filter(
registered_subject=self.registered_subject).count(),
len(post_natal_visit_schedule.visit_definitions))
appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='1000M',
visit_instance='0')
maternal_visit = MaternalVisitFactory(
appointment=appointment,
report_datetime=timezone.now(),
study_status=OFF_STUDY,
survival_status=ALIVE,
reason=COMPLETED_PROTOCOL_VISIT)
MaternalOffStudyFactory(
registered_subject=appointment.registered_subject,
maternal_visit=maternal_visit,
report_datetime=timezone.now(),
offstudy_date=date.today())
self.assertEqual(Appointment.objects.filter(
registered_subject=self.registered_subject).count(), 1)
def test_congentinal_yes(self):
postnatal_enrollment = PostnatalEnrollmentFactory(
registered_subject=self.registered_subject)
self.assertEqual(postnatal_enrollment.enrollment_hiv_status, POS)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='1000M')
self.maternal_visit = MaternalVisitFactory(appointment=self.appointment)
appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='2000M')
maternal_visit = MaternalVisitFactory(appointment=appointment)
maternal_labour_del = MaternalLabourDelFactory(maternal_visit=maternal_visit)
registered_subject_infant = RegisteredSubject.objects.get(
relative_identifier=self.registered_subject.subject_identifier,
subject_type=INFANT)
InfantBirthFactory(
registered_subject=registered_subject_infant,
maternal_labour_del=maternal_labour_del)
appointment = Appointment.objects.get(
registered_subject=registered_subject_infant,
visit_definition__code='2000')
infant_visit = InfantVisitFactory(appointment=appointment)
InfantBirthDataFactory(infant_visit=infant_visit)
self.assertEqual(
CrfMetaData.objects.filter(
entry_status=NEW,
crf_entry__app_label='mb_infant',
crf_entry__model_name='infantcongenitalanomalies',
appointment=appointment).count(), 1)
def test_infantbirtharv_required_on_postnatal_enrollment_pos(self):
postnatal_enrollment = PostnatalEnrollmentFactory(
registered_subject=self.registered_subject,
current_hiv_status=POS,
evidence_hiv_status=YES)
self.assertEqual(postnatal_enrollment.enrollment_hiv_status, POS)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='1000M')
self.maternal_visit = MaternalVisitFactory(appointment=self.appointment)
appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='2000M')
maternal_visit = MaternalVisitFactory(appointment=appointment)
maternal_labour_del = MaternalLabourDelFactory(maternal_visit=maternal_visit)
registered_subject_infant = RegisteredSubject.objects.get(
relative_identifier=self.registered_subject.subject_identifier,
subject_type=INFANT)
InfantBirthFactory(
registered_subject=registered_subject_infant,
maternal_labour_del=maternal_labour_del)
appointment = Appointment.objects.get(
registered_subject=registered_subject_infant,
visit_definition__code='2000')
InfantVisitFactory(appointment=appointment, reason=SCHEDULED)
self.assertEqual(
CrfMetaData.objects.filter(
entry_status=UNKEYED,
crf_entry__app_label='mb_infant',
crf_entry__model_name='infantbirtharv',
appointment=appointment).count(), 1)
def setUp(self):
try:
site_lab_profiles.register(MaternalProfile())
site_lab_profiles.register(InfantProfile())
except AlreadyRegisteredLabProfile:
pass
AppConfiguration(lab_profiles=site_lab_profiles).prepare()
AntenatalEnrollmentVisitSchedule().build()
PostnatalEnrollmentVisitSchedule().build()
site_rule_groups.autodiscover()
InfantBirthVisitSchedule().build()
self.maternal_eligibility = MaternalEligibilityFactory()
self.maternal_consent = MaternalConsentFactory(
registered_subject=self.maternal_eligibility.registered_subject)
self.registered_subject = self.maternal_consent.registered_subject
PostnatalEnrollmentFactory(
registered_subject=self.registered_subject,
current_hiv_status=POS,
evidence_hiv_status=YES)
self.appointment = Appointment.objects.get(registered_subject=self.registered_subject,
visit_definition__code='1000M')
self.maternal_visit = MaternalVisitFactory(appointment=self.appointment)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject, visit_definition__code='2000M')
maternal_visit = MaternalVisitFactory(appointment=self.appointment)
self.maternal_labour_del = MaternalLabourDelFactory(maternal_visit=maternal_visit)
self.registered_subject_infant = RegisteredSubject.objects.get(
subject_type=INFANT, relative_identifier=self.registered_subject.subject_identifier)
def setUp(self):
super(TestMaternalObstericalHistoryForm, self).setUp()
self.maternal_eligibility = MaternalEligibilityFactory()
self.maternal_consent = MaternalConsentFactory(
registered_subject=self.maternal_eligibility.registered_subject)
self.registered_subject = self.maternal_consent.registered_subject
PostnatalEnrollmentFactory(registered_subject=self.registered_subject,
current_hiv_status=NEG,
evidence_hiv_status=YES,
rapid_test_done=YES,
rapid_test_result=NEG)
appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='1000M')
self.maternal_visit = MaternalVisitFactory(appointment=appointment,
reason=SCHEDULED)
self.data = {
'report_datetime': timezone.now(),
'maternal_visit': self.maternal_visit.id,
'prev_pregnancies': 2,
'pregs_24wks_or_more': 1,
'lost_before_24wks': 1,
'lost_after_24wks': 1,
'live_children': 1,
'children_died_b4_5yrs': 1
}
def test_if_maternal_pos_dna_pcr_required(self):
postnatal_enrollment = PostnatalEnrollmentFactory(
registered_subject=self.registered_subject,
current_hiv_status=POS,
evidence_hiv_status=YES)
self.assertEqual(postnatal_enrollment.enrollment_hiv_status, POS)
self.assertTrue(postnatal_enrollment.is_eligible)
appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='1000M')
self.maternal_visit = MaternalVisitFactory(appointment=appointment)
appointment = Appointment.objects.get(
registered_subject=self.registered_subject, visit_definition__code='2000M')
maternal_visit = MaternalVisitFactory(appointment=appointment)
maternal_labour_del = MaternalLabourDelFactory(maternal_visit=maternal_visit)
registered_subject_infant = RegisteredSubject.objects.get(
relative_identifier=self.registered_subject.subject_identifier,
subject_type=INFANT)
InfantBirthFactory(
registered_subject=registered_subject_infant,
maternal_labour_del=maternal_labour_del)
for code in ['2000', '2010', '2030', '2060', '2090', '2120']:
appointment = Appointment.objects.get(
registered_subject=registered_subject_infant,
visit_definition__code=code)
InfantVisitFactory(
appointment=appointment,
reason=SCHEDULED)
self.assertEqual(RequisitionMetaData.objects.filter(
entry_status=REQUIRED,
lab_entry__requisition_panel__name='DNA PCR',
lab_entry__app_label='mb_lab',
lab_entry__model_name='infantrequisition',
appointment=appointment).count(), 1)
def setUp(self):
super(TestInfantVisitForm, self).setUp()
maternal_eligibility = MaternalEligibilityFactory()
maternal_consent = MaternalConsentFactory(
registered_subject=maternal_eligibility.registered_subject)
registered_subject = maternal_consent.registered_subject
postnatal_enrollment = PostnatalEnrollmentFactory(
registered_subject=registered_subject,
current_hiv_status=POS,
evidence_hiv_status=YES,
rapid_test_done=NOT_APPLICABLE,
rapid_test_result=None,
rapid_test_date=None)
self.assertTrue(postnatal_enrollment.is_eligible)
appointment = Appointment.objects.get(
registered_subject=registered_subject,
visit_definition__code='1000M')
MaternalVisitFactory(appointment=appointment)
appointment = Appointment.objects.get(
registered_subject=registered_subject,
visit_definition__code='2000M')
maternal_visit = MaternalVisitFactory(appointment=appointment)
maternal_labour_del = MaternalLabourDelFactory(
maternal_visit=maternal_visit)
self.registered_subject_infant = RegisteredSubject.objects.get(
subject_type=INFANT,
relative_identifier=registered_subject.subject_identifier)
InfantBirthFactory(registered_subject=self.registered_subject_infant,
maternal_labour_del=maternal_labour_del)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject_infant,
visit_definition__code='2000')
def setUp(self):
super(TestInfantBirthRecordExam, self).setUp()
self.maternal_eligibility = MaternalEligibilityFactory()
self.maternal_consent = MaternalConsentFactory(
registered_subject=self.maternal_eligibility.registered_subject)
self.registered_subject = self.maternal_consent.registered_subject
PostnatalEnrollmentFactory(
registered_subject=self.registered_subject,
current_hiv_status=POS,
evidence_hiv_status=YES,
)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='1000M')
self.maternal_visit = MaternalVisitFactory(
appointment=self.appointment)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='2000M')
maternal_visit = MaternalVisitFactory(appointment=self.appointment)
maternal_labour_del = MaternalLabourDelFactory(
maternal_visit=maternal_visit)
self.registered_subject_infant = RegisteredSubject.objects.get(
subject_type=INFANT,
relative_identifier=self.registered_subject.subject_identifier)
self.infant_birth = InfantBirthFactory(
registered_subject=self.registered_subject_infant,
maternal_labour_del=maternal_labour_del,
gender='F',
)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject_infant,
visit_definition__code='2000')
self.infant_visit = InfantVisitFactory(appointment=self.appointment)
self.data = {
'report_datetime': timezone.now(),
'infant_birth': self.infant_birth.id,
'infant_visit': self.infant_visit.id,
'infant_exam_date': timezone.now().date(),
'general_activity': 'NORMAL',
'abnormal_activity': '',
'physical_exam_result': 'NORMAL',
'heent_exam': YES,
'heent_no_other': '',
'resp_exam': YES,
'resp_exam_other': '',
'cardiac_exam': YES,
'cardiac_exam_other': '',
'abdominal_exam': YES,
'abdominal_exam_other': '',
'skin_exam': YES,
'skin_exam_other': '',
'neurologic_exam': YES,
'neuro_exam_other': '',
'other_exam_info': 'NA',
}
def test_if_postnatal_eligible(self):
postnatal_enrollment = PostnatalEnrollmentFactory(
current_hiv_status=POS,
evidence_hiv_status=YES,
rapid_test_done=NOT_APPLICABLE,
registered_subject=self.registered_subject,
gestation_wks_delivered=35,
)
self.assertFalse(postnatal_enrollment.is_eligible)
def test_infant_visit_missed_at_2030_requires_circumcision_at_2060(self):
"""Test an missed infant visit at 2030 would require a circumcision form at 2060"""
postnatal_enrollment = PostnatalEnrollmentFactory(
registered_subject=self.registered_subject,
current_hiv_status=POS,
evidence_hiv_status=YES)
self.assertEqual(postnatal_enrollment.enrollment_hiv_status, POS)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='1000M')
self.maternal_visit = MaternalVisitFactory(appointment=self.appointment)
appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='2000M')
maternal_visit = MaternalVisitFactory(appointment=appointment)
maternal_labour_del = MaternalLabourDelFactory(maternal_visit=maternal_visit)
registered_subject_infant = RegisteredSubject.objects.get(
relative_identifier=self.registered_subject.subject_identifier,
subject_type=INFANT)
InfantBirthFactory(
registered_subject=registered_subject_infant,
maternal_labour_del=maternal_labour_del,
gender=MALE)
appointment = Appointment.objects.get(
registered_subject=registered_subject_infant,
visit_definition__code='2000')
InfantVisitFactory(
appointment=appointment,
reason=SCHEDULED)
appointment = Appointment.objects.get(
registered_subject=registered_subject_infant,
visit_definition__code='2010')
InfantVisitFactory(
appointment=appointment,
reason=SCHEDULED)
appointment = Appointment.objects.get(
registered_subject=registered_subject_infant,
visit_definition__code='2030')
InfantVisitFactory(
appointment=appointment,
reason=MISSED_VISIT)
appointment = Appointment.objects.get(
registered_subject=registered_subject_infant,
visit_definition__code='2060')
InfantVisitFactory(
appointment=appointment,
reason=SCHEDULED)
self.assertEqual(CrfMetaData.objects.filter(
entry_status=UNKEYED,
crf_entry__app_label='mb_infant',
crf_entry__model_name='infantcircumcision',
appointment=appointment).count(), 1)
def test_infant_arv_proph_not_required_from_2010(self):
"""Test that infant arv proph is required from 2010 visit"""
postnatal_enrollment = PostnatalEnrollmentFactory(
registered_subject=self.registered_subject,
current_hiv_status=NEG,
evidence_hiv_status=YES,
valid_regimen=NOT_APPLICABLE,
valid_regimen_duration=NOT_APPLICABLE,
rapid_test_done=YES,
rapid_test_date=timezone.now(),
rapid_test_result=NEG)
self.assertEqual(postnatal_enrollment.enrollment_hiv_status, NEG)
maternal_appointment_1000M = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='1000M')
MaternalVisitFactory(appointment=maternal_appointment_1000M)
maternal_appointment_2000M = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='2000M')
maternal_visit_2000M = MaternalVisitFactory(appointment=maternal_appointment_2000M)
maternal_labour_del = MaternalLabourDelFactory(maternal_visit=maternal_visit_2000M)
registered_subject_infant = RegisteredSubject.objects.get(
relative_identifier=self.registered_subject.subject_identifier,
subject_type=INFANT)
InfantBirthFactory(
registered_subject=registered_subject_infant,
maternal_labour_del=maternal_labour_del)
infant_appointment_2000 = Appointment.objects.get(
visit_definition__code='2000',
registered_subject=registered_subject_infant)
InfantVisitFactory(appointment=infant_appointment_2000)
self.assertFalse(CrfMetaData.objects.filter(
entry_status=NOT_REQUIRED,
crf_entry__app_label='mb_infant',
crf_entry__model_name='infantarvproph',
appointment=infant_appointment_2000).exists())
infant_appointment_2010 = Appointment.objects.get(
registered_subject=registered_subject_infant,
visit_definition__code='2010')
InfantVisitFactory(
appointment=infant_appointment_2010,
reason=SCHEDULED)
self.assertEqual(CrfMetaData.objects.filter(
entry_status=NOT_REQUIRED,
crf_entry__app_label='mb_infant',
crf_entry__model_name='infantarvproph',
appointment=infant_appointment_2010).count(), 1)
def setUp(self):
super(TestInfantFu, self).setUp()
self.maternal_eligibility = MaternalEligibilityFactory()
self.maternal_consent = MaternalConsentFactory(
registered_subject=self.maternal_eligibility.registered_subject)
self.registered_subject = self.maternal_eligibility.registered_subject
PostnatalEnrollmentFactory(registered_subject=self.registered_subject,
current_hiv_status=NEG,
evidence_hiv_status=YES,
rapid_test_done=YES,
rapid_test_result=NEG)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='1000M')
self.maternal_visit = MaternalVisitFactory(
appointment=self.appointment)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='2000M')
maternal_visit = MaternalVisitFactory(appointment=self.appointment)
maternal_labour_del = MaternalLabourDelFactory(
maternal_visit=maternal_visit)
infant_registered_subject = RegisteredSubject.objects.get(
subject_type=INFANT,
relative_identifier=self.registered_subject.subject_identifier)
self.infant_birth = InfantBirthFactory(
registered_subject=infant_registered_subject,
maternal_labour_del=maternal_labour_del)
self.appointment = Appointment.objects.get(
registered_subject=infant_registered_subject,
visit_definition__code='2000')
self.infant_visit = InfantVisitFactory(appointment=self.appointment)
self.appointment = Appointment.objects.get(
registered_subject=infant_registered_subject,
visit_definition__code='2010')
self.infant_visit = InfantVisitFactory(appointment=self.appointment)
self.data = {
'report_datetime': timezone.now(),
'infant_birth': self.infant_birth.id,
'infant_visit': self.infant_visit.id,
'physical_assessment': NO,
'diarrhea_illness': NO,
'has_dx': NO,
'was_hospitalized': NO,
}
def test_if_antenatal_postnatal_not_eligible(self):
"""Asserts raises exception if antenatal enrollment is not eligible and an attempt
is made to complete postnatal enrollment."""
antenatal_enrollment = AntenatalEnrollmentFactory(
current_hiv_status=POS,
evidence_hiv_status=YES,
week32_test=NO,
rapid_test_done=NOT_APPLICABLE,
registered_subject=self.registered_subject,
gestation_wks=35)
self.assertFalse(antenatal_enrollment.is_eligible)
with self.assertRaises(EnrollmentError):
PostnatalEnrollmentFactory(
current_hiv_status=POS,
evidence_hiv_status=YES,
rapid_test_done=NOT_APPLICABLE,
registered_subject=self.registered_subject)
def test_validate_rapid_test_done_no_result(self):
self.maternal_consent.dob = date(2015, 12, 7)
self.maternal_consent.save()
PostnatalEnrollmentFactory(
registered_subject=self.registered_subject,
current_hiv_status=NEG,
evidence_hiv_status=YES,
rapid_test_done=YES,
rapid_test_date=date.today(),
rapid_test_result=NEG)
appointment = Appointment.objects.get(
registered_subject=self.registered_subject, visit_definition__code='1000M')
maternal_visit = MaternalVisitFactory(appointment=appointment, reason=SCHEDULED)
self.data['maternal_visit'] = maternal_visit.id
rapid_form = RapidTestResultForm(data=self.data)
self.assertIn("If a rapid test was processed, what is the test result?",
rapid_form.errors.get("__all__"))
def setUp(self):
super(TestMaternalRequisitionModel, self).setUp()
self.maternal_eligibility = MaternalEligibilityFactory()
self.maternal_consent = MaternalConsentFactory(
registered_subject=self.maternal_eligibility.registered_subject,
study_site=self.study_site)
self.registered_subject = self.maternal_consent.registered_subject
self.postnatal_enrollment = PostnatalEnrollmentFactory(
current_hiv_status=POS,
evidence_hiv_status=YES,
registered_subject=self.registered_subject,
will_breastfeed=YES)
self.panel = Panel.objects.get(name='Breast Milk (Storage)')
self.aliquot_type = AliquotType.objects.get(alpha_code='WB')
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='1000M')
def setUp(self):
super(TestInfantStoolCollection, self).setUp()
self.maternal_eligibility = MaternalEligibilityFactory()
self.maternal_consent = MaternalConsentFactory(registered_subject=self.maternal_eligibility.registered_subject)
self.registered_subject = self.maternal_eligibility.registered_subject
PostnatalEnrollmentFactory(
registered_subject=self.registered_subject,
current_hiv_status=NEG,
evidence_hiv_status=YES,
rapid_test_done=YES,
rapid_test_result=NEG)
self.appointment = Appointment.objects.get(registered_subject=self.registered_subject,
visit_definition__code='1000M')
self.maternal_visit = MaternalVisitFactory(appointment=self.appointment)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject, visit_definition__code='2000M')
maternal_visit = MaternalVisitFactory(appointment=self.appointment)
maternal_labour_del = MaternalLabourDelFactory(maternal_visit=maternal_visit)
infant_registered_subject = RegisteredSubject.objects.get(
subject_type=INFANT, relative_identifier=self.registered_subject.subject_identifier)
self.infant_birth = InfantBirthFactory(
registered_subject=infant_registered_subject,
maternal_labour_del=maternal_labour_del)
self.appointment = Appointment.objects.get(
registered_subject=infant_registered_subject,
visit_definition__code='2000')
self.infant_visit = InfantVisitFactory(appointment=self.appointment)
self.appointment = Appointment.objects.get(
registered_subject=infant_registered_subject,
visit_definition__code='2010')
self.infant_visit = InfantVisitFactory(appointment=self.appointment)
self.data = {
'report_datetime': timezone.now(),
'infant_visit': self.infant_visit.id,
'sample_obtained': NO,
'nappy_type': NOT_APPLICABLE,
'other_nappy': '',
'stool_collection': NOT_APPLICABLE,
'stool_collection_time': '',
'stool_stored': NOT_APPLICABLE,
'past_diarrhea': NO,
'diarrhea_past_24hrs': NOT_APPLICABLE,
'antibiotics_7days': NO,
'antibiotic_dose_24hrs': NOT_APPLICABLE
}
def test_validate_rapid_test_done_result(self):
self.maternal_consent.dob = date(2015, 12, 7)
self.maternal_consent.save()
PostnatalEnrollmentFactory(
registered_subject=self.registered_subject,
current_hiv_status=NEG,
evidence_hiv_status=YES,
rapid_test_done=YES,
rapid_test_date=date.today(),
rapid_test_result=NEG)
appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='1000M')
maternal_visit = MaternalVisitFactory(appointment=appointment, reason=SCHEDULED)
self.data['maternal_visit'] = maternal_visit.id
self.data['result'] = POS
rapid_form = RapidTestResultForm(data=self.data)
self.assertTrue(rapid_form.is_valid())
def setUp(self):
super(TestInfantBirthData, self).setUp()
self.maternal_eligibility = MaternalEligibilityFactory()
self.maternal_consent = MaternalConsentFactory(
registered_subject=self.maternal_eligibility.registered_subject)
self.registered_subject = self.maternal_eligibility.registered_subject
PostnatalEnrollmentFactory(
registered_subject=self.registered_subject,
current_hiv_status=NEG,
evidence_hiv_status=YES,
rapid_test_done=YES,
rapid_test_result=NEG)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='1000M')
self.maternal_visit = MaternalVisitFactory(appointment=self.appointment)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='2000M')
maternal_visit = MaternalVisitFactory(appointment=self.appointment)
maternal_labour_del = MaternalLabourDelFactory(maternal_visit=maternal_visit)
infant_registered_subject = RegisteredSubject.objects.get(
relative_identifier=self.registered_subject.subject_identifier,
subject_type=INFANT)
self.infant_birth = InfantBirthFactory(
registered_subject=infant_registered_subject,
maternal_labour_del=maternal_labour_del)
self.appointment = Appointment.objects.get(
registered_subject=infant_registered_subject,
visit_definition__code='2000')
self.infant_visit = InfantVisitFactory(appointment=self.appointment)
self.data = {
'report_datetime': timezone.now(),
'infant_birth': self.infant_birth.id,
'infant_visit': self.infant_visit.id,
'weight_kg': 3.61,
'infant_length': 89.97,
'head_circumference': 39.30,
'apgar_score': NO,
'apgar_score_min_1': '',
'apgar_score_min_5': '',
'apgar_score_min_10': '',
'congenital_anomalities': NO}
def setUp(self):
super(TestInfantImmunizations, self).setUp()
self.maternal_eligibility = MaternalEligibilityFactory()
self.maternal_consent = MaternalConsentFactory(
registered_subject=self.maternal_eligibility.registered_subject)
self.registered_subject = self.maternal_eligibility.registered_subject
PostnatalEnrollmentFactory(registered_subject=self.registered_subject,
current_hiv_status=NEG,
evidence_hiv_status=YES,
rapid_test_done=YES,
rapid_test_result=NEG)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='1000M')
self.maternal_visit = MaternalVisitFactory(
appointment=self.appointment)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='2000M')
maternal_visit = MaternalVisitFactory(appointment=self.appointment)
maternal_labour_del = MaternalLabourDelFactory(
maternal_visit=maternal_visit)
infant_registered_subject = RegisteredSubject.objects.get(
subject_type=INFANT,
relative_identifier=self.registered_subject.subject_identifier)
self.infant_birth = InfantBirthFactory(
registered_subject=infant_registered_subject,
maternal_labour_del=maternal_labour_del)
appointment1 = Appointment.objects.get(
registered_subject=infant_registered_subject,
visit_definition__code='2000')
InfantVisitFactory(appointment=appointment1)
self.appointment = Appointment.objects.get(
registered_subject=infant_registered_subject,
visit_definition__code='2010')
self.infant_visit = InfantVisitFactory(appointment=self.appointment)
self.data = {
'report_datetime': timezone.now(),
'infant_visit': self.infant_visit.id,
'vaccines_received': YES,
'vaccines_missed': NO
}
def infant_arv_proph_setup(self):
postnatal_enrollment = PostnatalEnrollmentFactory(
registered_subject=self.registered_subject,
current_hiv_status=POS,
evidence_hiv_status=YES)
self.assertEqual(postnatal_enrollment.enrollment_hiv_status, POS)
maternal_appointment_1000M = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='1000M')
MaternalVisitFactory(appointment=maternal_appointment_1000M)
maternal_appointment_2000M = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='2000M')
maternal_visit_2000 = MaternalVisitFactory(appointment=maternal_appointment_2000M)
maternal_labour_del = MaternalLabourDelFactory(maternal_visit=maternal_visit_2000)
registered_subject_infant = RegisteredSubject.objects.get(
relative_identifier=self.registered_subject.subject_identifier,
subject_type=INFANT)
InfantBirthFactory(
registered_subject=registered_subject_infant,
maternal_labour_del=maternal_labour_del)
infant_appointment_2000 = Appointment.objects.get(
visit_definition__code='2000',
registered_subject=registered_subject_infant)
InfantVisitFactory(appointment=infant_appointment_2000)
infant_appointment_2010 = Appointment.objects.get(
registered_subject=registered_subject_infant,
visit_definition__code='2010')
infant_visit_2010 = InfantVisitFactory(
appointment=infant_appointment_2010,
reason=SCHEDULED)
self.assertEqual(CrfMetaData.objects.filter(
entry_status=UNKEYED,
crf_entry__app_label='mb_infant',
crf_entry__model_name='infantarvproph',
appointment=infant_appointment_2010).count(), 1)
InfantArvProphFactory(infant_visit=infant_visit_2010, prophylatic_nvp=YES, arv_status=NO_MODIFICATIONS)
self.assertEqual(CrfMetaData.objects.filter(
entry_status=KEYED,
crf_entry__app_label='mb_infant',
crf_entry__model_name='infantarvproph',
appointment=infant_appointment_2010).count(), 1)
return registered_subject_infant
def setUp(self):
super(TestInfantArvProph, self).setUp()
self.maternal_eligibility = MaternalEligibilityFactory()
self.maternal_consent = MaternalConsentFactory(
registered_subject=self.maternal_eligibility.registered_subject)
self.registered_subject = self.maternal_consent.registered_subject
PostnatalEnrollmentFactory(registered_subject=self.registered_subject,
current_hiv_status=POS,
evidence_hiv_status=YES)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='1000M')
self.maternal_visit = MaternalVisitFactory(
appointment=self.appointment)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='2000M')
maternal_visit = MaternalVisitFactory(appointment=self.appointment)
maternal_labour_del = MaternalLabourDelFactory(
maternal_visit=maternal_visit)
infant_registered_subject = RegisteredSubject.objects.get(
subject_type=INFANT,
relative_identifier=self.registered_subject.subject_identifier)
self.infant_birth = InfantBirthFactory(
registered_subject=infant_registered_subject,
maternal_labour_del=maternal_labour_del)
self.appointment = Appointment.objects.get(
registered_subject=infant_registered_subject,
visit_definition__code='2000')
self.infant_visit = InfantVisitFactory(appointment=self.appointment)
self.infant_birth_arv = InfantBirthArvFactory(
infant_visit=self.infant_visit, azt_discharge_supply=YES)
self.appointment = Appointment.objects.get(
registered_subject=infant_registered_subject,
visit_definition__code='2010')
self.infant_visit = InfantVisitFactory(appointment=self.appointment)
self.data = {
'report_datetime': timezone.now(),
'infant_visit': self.infant_visit.id,
'prophylatic_nvp': YES,
'arv_status': 'modified',
}
def setUp(self):
super(TestInfantBirthArv, self).setUp()
self.maternal_eligibility = MaternalEligibilityFactory()
self.maternal_consent = MaternalConsentFactory(
registered_subject=self.maternal_eligibility.registered_subject)
self.registered_subject = self.maternal_consent.registered_subject
PostnatalEnrollmentFactory(registered_subject=self.registered_subject,
current_hiv_status=POS,
evidence_hiv_status=YES)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='1000M')
self.maternal_visit = MaternalVisitFactory(
appointment=self.appointment)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='2000M')
self.maternal_visit = MaternalVisitFactory(
appointment=self.appointment)
maternal_labour_del = MaternalLabourDelFactory(
maternal_visit=self.maternal_visit)
registered_subject_infant = RegisteredSubject.objects.get(
subject_type=INFANT,
relative_identifier=self.registered_subject.subject_identifier)
self.infant_birth = InfantBirthFactory(
registered_subject=registered_subject_infant,
maternal_labour_del=maternal_labour_del)
self.appointment = Appointment.objects.get(
registered_subject=registered_subject_infant,
visit_definition__code='2000')
self.infant_visit = InfantVisitFactory(appointment=self.appointment)
self.data = {
'report_datetime': timezone.now(),
'infant_visit': self.infant_visit.id,
'azt_after_birth': YES,
'azt_dose_date': timezone.now().date(),
'azt_additional_dose': YES,
'sdnvp_after_birth': YES,
'nvp_dose_date': timezone.now().date(),
}
def test_validate_offstudy_date(self):
PostnatalEnrollmentFactory(
registered_subject=self.registered_subject,
current_hiv_status=NEG,
evidence_hiv_status=YES,
rapid_test_done=YES,
rapid_test_result=NEG)
appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='1000M')
maternal_visit = MaternalVisitFactory(
appointment=appointment,
reason=COMPLETED_PROTOCOL_VISIT,
study_status=OFF_STUDY,
survival_status=ALIVE)
self.data['maternal_visit'] = maternal_visit.id
self.data['offstudy_date'] = date(2015, 10, 6)
offstudy_form = MaternalOffStudyForm(data=self.data)
self.assertIn(
"Off study date cannot be before consent date",
offstudy_form.errors.get("__all__"))
def test_1000M_metadata_set_to_offstudy_if_not_ante(self):
"""Asserts ineligible at postnatal creates 1000M off study visit and makes off study form required."""
postnatal_enrollment = PostnatalEnrollmentFactory(
registered_subject=self.registered_subject,
current_hiv_status=NEG,
evidence_hiv_status=YES,
rapid_test_done=NO)
self.assertFalse(postnatal_enrollment.is_eligible)
appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='1000M')
MaternalVisit.objects.get(appointment=appointment, reason=FAILED_ELIGIBILITY)
self.assertEqual(CrfMetaData.objects.filter(
entry_status=REQUIRED,
crf_entry__app_label='mb_maternal',
crf_entry__model_name='maternaloffstudy',
appointment=appointment).count(), 1)
appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='2000M')
self.assertRaises(MaternalVisit.DoesNotExist, MaternalVisit.objects.get, appointment=appointment)
def setUp(self):
super(TestOffStudy, self).setUp()
self.maternal_eligibility = MaternalEligibilityFactory()
self.registered_subject = self.maternal_eligibility.registered_subject
self.maternal_consent = MaternalConsentFactory(
registered_subject=self.registered_subject)
PostnatalEnrollmentFactory(registered_subject=self.registered_subject,
current_hiv_status=NEG,
evidence_hiv_status=YES,
rapid_test_done=YES,
rapid_test_result=NEG)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='1000M')
self.maternal_visit = MaternalVisitFactory(
appointment=self.appointment)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='2000M')
maternal_visit = MaternalVisitFactory(appointment=self.appointment)
maternal_labour_del = MaternalLabourDelFactory(
maternal_visit=maternal_visit)
self.infant_registered_subject = RegisteredSubject.objects.get(
relative_identifier=self.registered_subject.subject_identifier,
subject_type=INFANT)
self.infant_birth = InfantBirthFactory(
registered_subject=self.infant_registered_subject,
maternal_labour_del=maternal_labour_del)
self.infant_appointment = Appointment.objects.get(
registered_subject=self.infant_registered_subject,
visit_definition__code='2000')
self.data = {
'registered_subject': self.registered_subject.id,
'reason': 'not_{}'.format(MIN_AGE_OF_CONSENT),
'has_scheduled_data': YES,
'infant_visit': None,
'offstudy_date': timezone.now().date(),
}
def setUp(self):
super(TestMaternalRequisitionForm, self).setUp()
self.maternal_eligibility = MaternalEligibilityFactory()
self.maternal_consent = MaternalConsentFactory(
registered_subject=self.maternal_eligibility.registered_subject,
study_site=self.study_site)
self.registered_subject = self.maternal_consent.registered_subject
postnatal_enrollment = PostnatalEnrollmentFactory(
current_hiv_status=POS,
evidence_hiv_status=YES,
registered_subject=self.registered_subject,
will_breastfeed=YES)
self.assertTrue(postnatal_enrollment.is_eligible)
appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='1000M')
MaternalVisitFactory(appointment=appointment, reason=SCHEDULED)
self.appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='2000M')
self.panel = Panel.objects.get(name='Breast Milk (Storage)')
self.aliquot_type = AliquotType.objects.get(alpha_code='WB')
self.data = {
'maternal_visit': None,
'requisition_identifier': 'ZXDF39U',
'requisition_datetime': timezone.now(),
'report_datetime': timezone.now(),
'is_drawn': NO,
'reason_not_drawn': 'collection_failed',
'drawn_datetime': '',
'study_site': self.study_site,
'panel': self.panel.id,
'aliquot_type': self.aliquot_type.id,
'item_type': 'tube',
'item_count_total': '',
'estimated_volume': '',
'priority': '',
'comments': '',
}
def test_validate_rapid_test_done_processed1(self):
self.maternal_consent.dob = date(2015, 12, 7)
self.maternal_consent.save()
PostnatalEnrollmentFactory(
registered_subject=self.registered_subject,
current_hiv_status=NEG,
evidence_hiv_status=YES,
rapid_test_done=YES,
rapid_test_result=NEG)
appointment = Appointment.objects.get(
registered_subject=self.registered_subject, visit_definition__code='1000M')
maternal_visit = MaternalVisitFactory(appointment=appointment, reason=SCHEDULED)
result_date = date.today()
self.data['maternal_visit'] = maternal_visit.id
self.data['rapid_test_done'] = NO
self.data['result_date'] = result_date
self.data['result'] = None
rapid_form = RapidTestResultForm(data=self.data)
self.assertIn(
'If a rapid test was not processed, please do not '
'provide the result date. Got {}.'.format(result_date.strftime('%Y-%m-%d')),
rapid_form.errors.get("__all__"))
def test_offstudy2(self):
PostnatalEnrollmentFactory(
registered_subject=self.registered_subject,
current_hiv_status=POS,
evidence_hiv_status=YES,
rapid_test_done=NOT_APPLICABLE)
appointment = Appointment.objects.get(
registered_subject=self.registered_subject,
visit_definition__code='1000M')
maternal_visit = MaternalVisitFactory(
appointment=appointment,
report_datetime=timezone.now(),
study_status=OFF_STUDY,
reason=COMPLETED_PROTOCOL_VISIT)
MaternalOffStudyFactory(
registered_subject=appointment.registered_subject,
report_datetime=timezone.now(),
offstudy_date=date.today(),
maternal_visit=maternal_visit)
self.assertEqual(
Appointment.objects.filter(
registered_subject=self.registered_subject).count(), 1)
def setUp(self):
super(TestInfantBirth, self).setUp()
maternal_eligibility = MaternalEligibilityFactory()
maternal_consent = MaternalConsentFactory(
registered_subject=maternal_eligibility.registered_subject)
registered_subject = maternal_consent.registered_subject
postnatal_enrollment = PostnatalEnrollmentFactory(
registered_subject=registered_subject,
current_hiv_status=NEG,
evidence_hiv_status=YES,
rapid_test_done=YES,
rapid_test_result=NEG)
self.assertTrue(postnatal_enrollment.is_eligible)
appointment1000 = Appointment.objects.get(
registered_subject=registered_subject,
visit_definition__code='1000M')
appointment2000 = Appointment.objects.get(
registered_subject=registered_subject,
visit_definition__code='2000M')
MaternalVisitFactory(appointment=appointment1000)
maternal_visit = MaternalVisitFactory(appointment=appointment2000)
self.maternal_labour_del = MaternalLabourDelFactory(
maternal_visit=maternal_visit)
self.infant_registered_subject = RegisteredSubject.objects.get(
relative_identifier=registered_subject.subject_identifier,
subject_type=INFANT)
self.data = {
'report_datetime': timezone.now(),
'registered_subject': self.infant_registered_subject.id,
'maternal_labour_del': self.maternal_labour_del.id,
'first_name': 'FIRST NAME',
'initials': 'FN',
'dob': self.maternal_labour_del.delivery_datetime.date(),
'gender': FEMALE
}
