def get_han2(sent_num, sent_length, embed_weight, mask_zero=False):
input = Input(shape=(
sent_num,
sent_length,
), dtype="int32")
embedding = Embedding(name="embeeding",
input_dim=embed_weight.shape[0],
weights=[embed_weight],
output_dim=embed_weight.shape[1],
mask_zero=mask_zero,
trainable=False)
sent_embed = embedding(input)
# print(np.shape(sent_embed))
sent_embed = Reshape((1, sent_length, embed_weight.shape[1]))(sent_embed)
print(np.shape(sent_embed))
word_bigru = Bidirectional(GRU(128, return_sequences=True))(sent_embed)
word_bigru = Reshape((sent_length, 256))(word_bigru)
# print(np.shape(word_bigru))
word_attention = Attention(sent_length)(word_bigru)
sent_encode = Reshape((-1, sent_num))(word_attention)
# sent_encode = Model(sentence_input, word_attention)
#
# doc_input = Input(shape=(sent_num, sent_length), dtype="int32")
# doc_encode = TimeDistributed(sent_encode)(doc_input)
sent_bigru = Bidirectional(GRU(128, return_sequences=True))(sent_encode)
doc_attention = Attention(sent_num)(sent_bigru)
fc = Activation(activation="relu")(BatchNormalization()(
Dense(256)(doc_attention)))
output = Dense(4, activation='softmax')(fc)
model = Model(input, output)
model.compile(loss='categorical_crossentropy',
optimizer="adam",
metrics=['accuracy'])
return model
def __init__(self, config, embed_size, padding_idx, label_size):
super(Contextualized, self).__init__()
self.bilstm = Bilstm(config, embed_size)
self.attention_s = Attention(config)
self.attention_l = Attention(config)
self.attention_r = Attention(config)
self.linear_out = nn.Linear(config.hidden_dim * 6, label_size)
def get_word_char_hcnn(sent_num,
sent_word_length,
sent_char_length,
word_embed_weight,
char_embed_weight,
mask_zero=False):
sentence_word_input = Input(shape=(sent_word_length, ), dtype="int32")
word_embedding = Embedding(name="word_embedding",
input_dim=word_embed_weight.shape[0],
weights=[word_embed_weight],
output_dim=word_embed_weight.shape[1],
mask_zero=mask_zero,
trainable=False)
sent_word_embed = word_embedding(sentence_word_input)
word_bigru = Bidirectional(GRU(128,
return_sequences=True))(sent_word_embed)
word_attention = Attention(sent_word_length)(word_bigru)
sent_word_encode = Model(sentence_word_input, word_attention)
sentence_char_input = Input(shape=(sent_char_length, ), dtype="int32")
char_embedding = Embedding(
name="char_embedding",
input_dim=char_embed_weight.shape[0],
weights=[char_embed_weight],
output_dim=char_embed_weight.shape[1],
mask_zero=mask_zero,
)
sent_char_embed = char_embedding(sentence_char_input)
char_bigru = Bidirectional(GRU(64, return_sequences=True))(sent_char_embed)
char_attention = Attention(sent_char_length)(char_bigru)
sent_char_encode = Model(sentence_char_input, char_attention)
review_word_input = Input(shape=(sent_num, sent_word_length),
dtype="int32")
review_word_encode = TimeDistributed(sent_word_encode)(review_word_input)
review_char_input = Input(shape=(sent_num, sent_char_length),
dtype="int32")
review_char_encode = TimeDistributed(sent_char_encode)(review_char_input)
review_encode = concatenate([review_word_encode, review_char_encode])
unvec = convs_block(review_encode, convs=[1, 2, 3, 4, 5], f=256)
dropfeat = Dropout(0.2)(unvec)
fc = Activation(activation='relu')(BatchNormalization()(
Dense(256)(dropfeat)))
output = Dense(4, activation="softmax")(fc)
model = Model([review_word_input, review_char_input], output)
model.compile(loss='categorical_crossentropy',
optimizer="adam",
metrics=['accracy'])
return model
def main():
torch.manual_seed(777)
device = torch.device('cuda:0' if torch.cuda.is_available() else 'cpu')
parser = argparse.ArgumentParser()
parser.add_argument("--path", type=str)
parser.add_argument("--embedding_dim", type=int, default=300)
parser.add_argument("--iterator", type=int, default=10)
parser.add_argument("--lr", type=float, default=1e-5)
parser.add_argument("--decay", type=float, default=0.01)
parser.add_argument("--batch_size", type=int, default=100)
args = parser.parse_args()
trg, src = load_pair(args.path)
src_token = eng_tokenize(src)
trg_token = es_tokenize(trg)
trg2idx, idx2_trg = make_dictionary(trg_token)
src2idx, idx2src = make_dictionary(src_token)
src_ix = make_src_idx(src_token, src2idx)
trg_ix = make_trg_idx(trg_token, trg2idx)
args.embedding_dim
# model 선언부
encoder = EncoderGRU(emb_dim=args.embedding_dim,
bidirectional=True,
vocab_size=len(src2idx))
attention = Attention(emb_dim=args.embedding_dim, padding_idx=0)
decoder = DecoderGRU(emb_dim=args.embedding_dim,
attention=attention,
n_class=len(trg2idx))
model = Seq2Seq_a(encoder, decoder, device, trg2idx)
num_parameter(model)
#loss , optimizer 설정
loss_func = nn.CrossEntropyLoss(ignore_index=0)
optimizer = optim.RMSprop(model.parameters(),
lr=args.lr,
weight_decay=args.decay)
#data 나누기
train_loader, test_loader = prepare_data(src=src_ix,
trg=trg_ix,
test_size=0.2,
batch_size=args.batch_size)
train(model,
iterator=args.iterator,
optimizer=optimizer,
criterion=loss_func,
train_loader=train_loader,
visual_path="ssibal",
trg2idx=trg2idx,
savepath="./seq2seq_model.pth")
def main(fpath):
ENC_EMB_DIM = 256
DEC_EMB_DIM = 256
ENC_HID_DIM = 512
DEC_HID_DIM = 512
ENC_DROPOUT = 0.5
DEC_DROPOUT = 0.5
device = torch.device('cuda')
dataset = Dataset()
INPUT_DIM = len(dataset.SRC.vocab)
OUTPUT_DIM = len(dataset.TRG.vocab)
SRC_PAD_IDX = dataset.SRC.vocab.stoi[dataset.SRC.pad_token]
encoder = Encoder(INPUT_DIM, ENC_EMB_DIM, ENC_HID_DIM, DEC_HID_DIM,
ENC_DROPOUT)
attention = Attention(ENC_HID_DIM, DEC_HID_DIM)
decoder = Decoder(DEC_EMB_DIM, ENC_HID_DIM, DEC_HID_DIM, OUTPUT_DIM,
DEC_DROPOUT, attention)
model = Seq2Seq(encoder, decoder, SRC_PAD_IDX, device)
model.load_state_dict(torch.load("best_model.pt"))
model.to(device)
with open(fpath, "r") as f:
sentences = f.readlines()
translate_sentence(model, sentences, dataset.SRC, dataset.TRG, device)
def __init__(self, config, embed_size, padding_idx, label_size, embedding):
super(Vanilla, self).__init__()
self.bilstm = Bilstm(config, embed_size, embedding)
self.attention = Attention(config)
self.linear_out = nn.Linear(config.hidden_dim * 2, label_size)
def main():
BATCH_SIZE = 32
NUM_EPOCH = 12
LR = 0.001
CLIP = 1
STEP_SIZE = 4
GAMMA = 0.1
ENC_EMB_DIM = 256
DEC_EMB_DIM = 256
ENC_HID_DIM = 512
DEC_HID_DIM = 512
ENC_DROPOUT = 0.5
DEC_DROPOUT = 0.5
device = torch.device('cuda')
dataset = Dataset()
train_data, valid_data, test_data = dataset.build_dataset()
train_iterator, valid_iterator, test_iterator = BucketIterator.splits(
(train_data, valid_data, test_data),
batch_size=BATCH_SIZE,
sort_within_batch=True,
sort_key=lambda x: len(x.src),
device=device)
INPUT_DIM = len(dataset.SRC.vocab)
OUTPUT_DIM = len(dataset.TRG.vocab)
SRC_PAD_IDX = dataset.SRC.vocab.stoi[dataset.SRC.pad_token]
TRG_PAD_IDX = dataset.TRG.vocab.stoi[dataset.TRG.pad_token]
encoder = Encoder(INPUT_DIM, ENC_EMB_DIM, ENC_HID_DIM, DEC_HID_DIM,
ENC_DROPOUT)
attention = Attention(ENC_HID_DIM, DEC_HID_DIM)
decoder = Decoder(DEC_EMB_DIM, ENC_HID_DIM, DEC_HID_DIM, OUTPUT_DIM,
DEC_DROPOUT, attention)
model = Seq2Seq(encoder, decoder, SRC_PAD_IDX, device)
model.apply(init_weight)
model.to(device)
optimizer = Adam(model.parameters(), lr=LR)
criterion = CrossEntropyLoss(ignore_index=TRG_PAD_IDX).to(device)
scheduler = StepLR(optimizer, STEP_SIZE, GAMMA)
min_valid_loss = 1e10
for e in range(NUM_EPOCH):
print("Epoch: {}".format(e + 1))
train_loss = train(model, train_iterator, optimizer, criterion, CLIP)
print("Train loss: {}".format(train_loss))
valid_loss = evaluate(model, valid_iterator, criterion)
print("Valid loss: {}".format(valid_loss))
if valid_loss < min_valid_loss:
torch.save(model.state_dict(), "best_model.pt")
min_valid_loss = valid_loss
def __init__(self, vocab_size, embedding_dim, dec_units, batch_sz):
super(Decoder, self).__init__()
self.batch_sz = batch_sz
self.dec_units = dec_units
self.embedding = tf.keras.layers.Embedding(vocab_size, embedding_dim)
self.gru = tf.keras.layers.GRU(self.dec_units,
return_sequences=True,
return_state=True,
recurrent_initializer='glorot_uniform')
self.fc = tf.keras.layers.Dense(vocab_size)
self.attention = Attention.BahdanauAttention(1024)
def main(_):
parser = argparse.ArgumentParser()
parser.add_argument(
'--action',
dest='action',
type=str,
default='train',
help='actions: train, or test')
args = parser.parse_args()
if args.action not in ['train', 'test']:
print('invalid action: ', args.action)
print("Please input a action: train, test")
else:
model= Attention(tf.Session(),configure())
getattr(model,args.action)()
def build_model(self, n_classes=1, embedding_dim=300):
'Build bi-level bi-directional GRU model with attention over word embeddings'
l2_reg = regularizers.l2(1e-8)
sentence_in = Input(shape=(self.max_len, ), dtype="int32")
masking_layer = Masking(mask_value=0)(sentence_in)
embedded_word_seq = Embedding(10000,
300,
input_length=self.max_len,
trainable=False,
weights=[self.embedding_weights
])(masking_layer)
word_encoder = Bidirectional(
GRU(50, return_sequences=True,
kernel_regularizer=l2_reg))(embedded_word_seq)
dense_transform_w = Dense(100,
activation="relu",
name="dense_transform_w",
kernel_regularizer=l2_reg)(word_encoder)
attn_weighted_sent = Model(
sentence_in,
Attention(name='word_attention',
regularizer=l2_reg)(dense_transform_w))
attn_weighted_sent.summary()
texts_in = Input(shape=(self.max_sentence, self.max_len),
dtype='int32')
attention_weighted_sentences = TimeDistributed(attn_weighted_sent)(
texts_in)
sentence_encoder = Bidirectional(
GRU(50, return_sequences=True, kernel_regularizer=l2_reg),
name="sentence_encoder")(attention_weighted_sentences)
dense_transform_s = TimeDistributed(
Dense(100,
activation='relu',
name='dense_transform_s',
kernel_regularizer=l2_reg))(sentence_encoder)
prediction = TimeDistributed(Dense(
1, activation="sigmoid"))(dense_transform_s)
model = Model(texts_in, prediction)
model.summary()
model.compile(optimizer=Adam(lr=0.001),
loss="binary_crossentropy",
metrics=["acc"],
sample_weight_mode="temporal")
return (model)
def init_model(
with_attention=False,
teaching_force_ratio=0.5,
embedding_size=500,
hidden_size=256,
):
"""
Instantiates the model by creating the Encoder, the Decoder and the
model itself which represents the seq2seq architecture.
:param with_attention: if true then the model apply the attention mechanism
:param teaching_force_ratio: used to alternate between generated word or gt-word during training.
:return encoder, decoder, model: the encoder, the decoder and the seq2seq model.
"""
if with_attention:
# init with attention
encoder = EncoderAttention(embedding_size, hidden_size,
vocabulary.__len__()).to(device)
attention = Attention(hidden_size).to(device)
decoder = DecoderAttention(embedding_size,
hidden_size,
vocabulary.__len__(),
attention=attention).to(device)
model = ChatbotModel(encoder,
decoder,
vocabulary.__len__(),
with_attention=True,
tf_ratio=teaching_force_ratio).to(device)
return encoder, decoder, model
else:
# init with no attention
encoder = Encoder(embedding_size, hidden_size,
vocabulary.__len__()).to(device)
decoder = Decoder(embedding_size, hidden_size,
vocabulary.__len__()).to(device)
model = ChatbotModel(encoder,
decoder,
vocabulary.__len__(),
with_attention=False,
tf_ratio=teaching_force_ratio).to(device)
return encoder, decoder, model
def get_hcnn(sent_num, sent_length, embed_weight, mask_zero=False):
sentence_input = Input(shape=(sent_length, ), dtype="int32")
embedding = Embedding(input_dim=embed_weight.shape[0],
weights=[embed_weight],
output_dim=embed_weight.shape[1],
mask_zero=mask_zero,
trainable=False)
sent_embed = embedding(sentence_input)
word_bigru = Bidirectional(GRU(128, return_sequences=True))(sent_embed)
word_attention = Attention(sent_length)(word_bigru)
sent_encode = Model(sentence_input, word_attention)
review_input = Input(shape=(sent_num, sent_length), dtype="int32")
review_encode = TimeDistributed(sent_encode)(review_input)
feat = convs_block(review_encode)
dropfeat = Dropout(0.2)(feat)
fc = Activation(activation="relu")(BatchNormalization()(
Dense(256)(dropfeat)))
output = Dense(2, activation="softmax")(fc)
model = Model(review_input, output)
model.compile(loss='categorical_crossentropy',
optimizer="adam",
metrics=['accuracy'])
return model
import torch
from dataloader import prepare_data
from model import Encoder, Attention, Decoder, Seq2Seq, init_weights
from trainer import Trainer
from config import *
""" load data """
train_loader, val_loader, test_loader, m_dh = prepare_data(
TRAIN_PATH, VAL_PATH, TEST_PATH, DH_PATH, LOAD_FROM_DUMP, BATCH_SIZE)
""" model setup """
INPUT_DIM, OUTPUT_DIM = len(m_dh.de_vocab), len(m_dh.en_vocab)
enc = Encoder(INPUT_DIM, ENC_EMB_DIM, ENC_HID_DIM, DEC_HID_DIM, ENC_DROPOUT)
attn = Attention(ENC_HID_DIM, DEC_HID_DIM, ATTN_DIM)
dec = Decoder(OUTPUT_DIM, DEC_EMB_DIM, ENC_HID_DIM, DEC_HID_DIM, DEC_DROPOUT,
attn)
model = Seq2Seq(enc, dec)
model.apply(init_weights)
""" training setup """
optimizer = torch.optim.Adam(model.parameters(), lr=LR)
criterion = torch.nn.CrossEntropyLoss(ignore_index=1)
trainer = Trainer(model,
optimizer,
criterion,
train_loader,
val_loader,
val_best_path=VAL_BEST_PATH)
trainer.load('ckpts/best.pt')
train_set = BertDataset(bert_path / bert_model / 'train')
valid_set = BertDataset(bert_path / bert_model / 'valid')
training_loader = DataLoader(
train_set,
batch_size=mb,
shuffle=True,
num_workers=dl_workers,
pin_memory=True if device == 'cuda' else False)
valid_loader = DataLoader(valid_set,
batch_size=mb,
shuffle=True,
num_workers=dl_workers,
pin_memory=True if device == 'cuda' else False)
attention = Attention(bert_hidden_size, decoder_hidden_size,
attention_hidden_size) # add attention_hidden_size
decoder = Decoder(bert_vocab_size, decoder_input_size, bert_hidden_size,
decoder_hidden_size, num_layers, dropout, attention,
device)
encoder = BertModel.from_pretrained(model_path / stage / bert_model)
model = Seq2Seq(encoder, decoder, device, encoder_trained)
optimizer = optim.SGD(decoder.parameters(),
weight_decay=weight_decay,
lr=lr,
momentum=momentum)
criterion = nn.CrossEntropyLoss(ignore_index=0,
reduction='none') # Pad Index
if checkpoint is not None:
def run(args):
device = torch.device("cuda" if torch.cuda.is_available() else "cpu")
n_worker = 2
n_epoch = args.epochs
torch.manual_seed(args.seed)
torch.cuda.manual_seed(args.seed) # backward pass
print('Load Train and Test Set')
train_loader = DataLoader(MnistBags(target_number=args.target_number,
min_target_count=args.min_target_count,
mean_bag_length=args.mean_bag_length,
var_bag_length=args.var_bag_length,
scale=args.scale,
num_bag=args.num_bags_train,
seed=args.seed,
train=True),
batch_size=args.batchsize,
shuffle=True,
num_workers=n_worker,
pin_memory=torch.cuda.is_available())
test_loader = DataLoader(MnistBags(target_number=args.target_number,
min_target_count=args.min_target_count,
mean_bag_length=args.mean_bag_length,
var_bag_length=args.var_bag_length,
scale=args.scale,
num_bag=args.num_bags_test,
seed=args.seed,
train=False),
batch_size=args.batchsize,
shuffle=False,
num_workers=n_worker,
pin_memory=torch.cuda.is_available())
# resume checkpoint
checkpoint = load_ckpt()
if checkpoint:
print('Resume training ...')
start_epoch = checkpoint.epoch
model = checkpoint.model
else:
print('Grand new training ...')
start_epoch = 0
model = Attention()
# put model to multiple GPUs if available
if torch.cuda.device_count() > 1:
print("Let's use ", torch.cuda.device_count(), " GPUs!")
model = nn.DataParallel(model)
model = model.to(device)
optimizer = optim.Adam(model.parameters(),
lr=args.lr,
betas=(0.9, 0.999),
weight_decay=args.reg)
if checkpoint:
try:
optimizer.load_state_dict(checkpoint.optimizer)
except:
print(
'[WARNING] optimizer not restored from last checkpoint, continue without previous state'
)
# free checkpoint reference
del checkpoint
log_dir = os.path.join('logs', args.logname)
n_cv_epoch = 1 #2
with SummaryWriter(log_dir) as writer:
print('\nTraining started ...')
for epoch in range(start_epoch + 1,
n_epoch + start_epoch + 1): # 1 base
train(model, optimizer, train_loader, epoch, writer)
if epoch % n_cv_epoch == 0:
with torch.no_grad():
test(model, optimizer, test_loader, epoch, writer)
save_ckpt(model, optimizer, epoch)
print('\nTraining finished ...')
def build_model(sentence_len, max_words, doc_embedding, sent_embedding):
'Constructs the multi-task training extractor/classifier model'
l2_reg = regularizers.l2(1e-6)
l1_l2reg = regularizers.l1_l2(1e-5)
## word encoder - extractor
sentence_in = Input(shape=(sentence_len, ), dtype="int32")
embedded_word_seq = Embedding(max_words,
300,
input_length=sentence_len,
trainable=False,
weights=[doc_embedding])(sentence_in)
#embedded_word_seq_learn = Embedding(10000, 300, input_length = 30, trainable = True)(sentence_in)
#embedding_concat = concatenate([embedded_word_seq, embedded_word_seq_learn])
word_encoder = Bidirectional(
GRU(50, return_sequences=True,
kernel_regularizer=l2_reg))(embedded_word_seq)
dense_transform_w = Dense(100,
activation="relu",
name="dense_transform_w",
kernel_regularizer=l2_reg)(word_encoder)
attn_weighted_sent = Model(
sentence_in,
Attention(name='word_attention',
regularizer=l2_reg)(dense_transform_w))
attn_weighted_sent.summary()
# Inputs - sentence encoder - extractor
class_input = Input(shape=(sentence_len, ), dtype="int32", name="CL_input")
class_ids = Input(shape=(1, ), dtype="int32", name="CL_IDs")
texts_in = Input(shape=(100, sentence_len), dtype='int32')
# sentence encoder - extractor
attention_weighted_sentences = TimeDistributed(
attn_weighted_sent, name="EX_sent_attn")(texts_in)
sentence_encoder = Bidirectional(
GRU(50, return_sequences=True,
name="sentence_encoder"))(attention_weighted_sentences)
sentence_matcher = Lambda(lambda x: x[:, tf.squeeze(class_ids), :],
output_shape=(100, ))(sentence_encoder)
dense_transform_s = TimeDistributed(
Dense(100,
activation='relu',
name='EX_sent_dense',
kernel_regularizer=l1_l2reg))(sentence_encoder)
dropout_extractor = Dropout(0.5)(dense_transform_s)
output_extractor = TimeDistributed(
Dense(1, activation="sigmoid", name="EX_out"))(dropout_extractor)
# sentence classifier
embedded_words = Embedding(max_words,
300,
input_length=sentence_len,
trainable=False,
name="CL_embed",
weights=[sent_embedding])(class_input)
rnn = Bidirectional(
GRU(50,
return_sequences=True,
name="CL_RNN",
kernel_regularizer=l2_reg))(embedded_words)
dense_w = TimeDistributed(
Dense(100, kernel_regularizer=l2_reg, name="CL_dense"))(rnn)
attn = AttentionWithContext(name="CL_attn")(dense_w)
merge_layer = concatenate([attn, sentence_matcher], name="CL_merging")
output_classifier = Dense(n_classes, activation="sigmoid")(merge_layer)
model = Model(inputs=[class_input, texts_in, class_ids],
outputs=[output_classifier, output_extractor])
model.summary()
model.compile(optimizer=Adam(lr=0.0002),
loss={
'dense_1': 'binary_crossentropy',
'time_distributed_2': 'binary_crossentropy'
},
metrics={
'dense_1': [top_1_accuracy, top_3_accuracy],
'time_distributed_2': ['acc']
})
return (model)
shuffle=True,
**loader_kwargs)
test_loader = data_utils.DataLoader(MnistBags(
xor_numbers=[7, 9],
mean_bag_length=args.mean_bag_length,
var_bag_length=args.var_bag_length,
num_bag=args.num_bags_test,
seed=args.seed,
train=False),
batch_size=1,
shuffle=False,
**loader_kwargs)
print('Init Model')
model = Attention(args.self_att)
if args.cuda:
model.cuda()
optimizer = optim.Adam(model.parameters(),
lr=args.lr,
betas=(0.9, 0.999),
weight_decay=args.reg)
def train(epoch, sw):
model.train()
train_loss = 0.
train_error = 0.
for batch_idx, (data, label) in enumerate(train_loader):
bag_label = label[0]
def test(config_path):
# Load the parameters
param_dict, rep_param_dict = load_params(config_path)
# load data
TEST_DIR01 = '{}/MQ2007/S1/'.format(param_dict["data_base_path"])
TEST_DIR02 = '{}/MQ2007/S2/'.format(param_dict["data_base_path"])
TEST_DIR03 = '{}/MQ2007/S3/'.format(param_dict["data_base_path"])
TEST_DIR04 = '{}/MQ2007/S4/'.format(param_dict["data_base_path"])
TEST_DIR05 = '{}/MQ2007/S5/'.format(param_dict["data_base_path"])
test_files01 = glob.glob("{}/testdata0.pkl".format(TEST_DIR01))
test_files02 = glob.glob("{}/testdata0.pkl".format(TEST_DIR02))
test_files03 = glob.glob("{}/testdata0.pkl".format(TEST_DIR03))
test_files04 = glob.glob("{}/testdata0.pkl".format(TEST_DIR04))
test_files05 = glob.glob("{}/testdata0.pkl".format(TEST_DIR05))
fold = param_dict["fold"]
model_base_path = param_dict['model_base_path']
model_name_str = param_dict['model_name_str']
if fold == 1:
test_files = test_files05[0] # a path list ['/...'] only take the str
rel_path = '{}/{}/tmp/test/S5.qrels'.format(model_base_path,
model_name_str)
elif fold == 2:
test_files = test_files01[0]
rel_path = '{}/{}/tmp/test/S1.qrels'.format(model_base_path,
model_name_str)
elif fold == 3:
test_files = test_files02[0]
rel_path = '{}/{}/tmp/test/S2.qrels'.format(model_base_path,
model_name_str)
elif fold == 4:
test_files = test_files03[0]
rel_path = '{}/{}/tmp/test/S3.qrels'.format(model_base_path,
model_name_str)
elif fold == 5:
test_files = test_files04[0]
rel_path = '{}/{}/tmp/test/S4.qrels'.format(model_base_path,
model_name_str)
else:
raise ValueError("wrong fold num {}".format(fold))
test_data = load_dataset(test_files)
q_len = param_dict['q_len']
d_len = param_dict['d_len']
emb_size = param_dict['emb_size']
num_heads = param_dict['num_heads']
kernel_size = rep_param_dict['kernel_size']
filt_size = rep_param_dict['filt_size']
vocab_size = param_dict['vocab_size']
output_dim = rep_param_dict['output_dim']
hidden_size = param_dict['hidden_size']
batch_size = param_dict['batch_size']
preemb = param_dict['preemb']
emb_path = param_dict['emb_path']
hinge_margin = param_dict['hinge_margin']
model = Attention(emb_size=emb_size,
query_length=q_len,
doc_length=d_len,
num_heads=num_heads,
kernel_size=kernel_size,
filter_size=filt_size,
vocab_size=vocab_size,
dropout=0.0,
qrep_dim=output_dim,
hidden_size=hidden_size,
batch_size=batch_size,
preemb=preemb,
emb_path=emb_path).cuda()
# Test
# load model from file
model_file = '{}/{}/saves/model_file'.format(model_base_path,
model_name_str)
model.load_state_dict(torch.load(model_file))
print("loaded model, and perform test now")
MAP, NDCGs = evaluate(config_path, model, test_data, rel_path, mode="test")
print(MAP, NDCGs)
drop = 0.6
model = 'LSTM'
bi = True
criterion = crit
traindl, valdl = data.BucketIterator.splits(datasets=(trainds, valds),
batch_size=batch_size,
sort_key=lambda x: len(x.text),
device=device,
sort_within_batch=True,
repeat=False)
train_iter, val_iter = traindl, valdl
TEXT, LABEL = text_field, label_field
embedding = nn.Embedding(ntokens, emsize, padding_idx=1, max_norm=1)
if vectors:
embedding.weight.data.copy_(TEXT.vocab.vectors)
encoder = Encoder(emsize, hidden, nlayers=nlayers,
dropout=drop, bidirectional=bi)
attention_dim = hidden if not bi else 2*hidden
attention = Attention(attention_dim, attention_dim, attention_dim)
model = Classifier(embedding, encoder, attention, attention_dim, nlabels, baseline=True).to(device)
criterion = crit
optimizer = torch.optim.Adam(model.parameters(), lr, amsgrad=True)
for epoch in range(1, epochs + 1):
m = train(epoch, model, train_iter, val_iter, optimizer, criterion)
parser.add_argument('--model', type=str, default='attention', help='Choose b/w attention and gated_attention')
args = parser.parse_args()
args.cuda = not args.no_cuda and torch.cuda.is_available()
torch.manual_seed(args.seed)
if args.cuda:
torch.cuda.manual_seed(args.seed)
print('\nGPU is ON!')
print('Load Train and Test Set')
loader_kwargs = {'num_workers': 1, 'pin_memory': True} if args.cuda else {}
test_loader = data_utils.DataLoader(TorchDataset(filename="test_labels.txt", data_dir="dataset/val"), batch_size=1, shuffle=True, **loader_kwargs)
if args.model=='attention':
model = Attention()
elif args.model=='gated_attention':
model = GatedAttention()
if args.cuda:
model.cuda()
def test():
model = torch.load('model40.pth')
model.eval()
test_loss = 0.
y = []
y1 = []
y2 = []
for batch_idx, (data, label) in enumerate(tqdm(test_loader)):
bag_label = label
def main(reader, params):
#from rcnn_attention import evaluator
k_shot = params.k
num_negative_bags = params.neg
total_bags = k_shot + num_negative_bags
result_lists = {}
input_dim = 256 if params.dataset == 'omniglot' else 640
for i, tensor_data in enumerate(reader.get_data()):
if (i + 1) % 100 == 0:
print('Evaluating problem number %d/%d' % (i + 1, params.eval_num))
[feas, fea_boxes, fea_target_classes, fea_classes, imgs,
target_class] = tensor_data[0:6]
boxes_list = tensor_data[6:6 + total_bags]
class_list = tensor_data[6 + total_bags:]
bags = np.squeeze(feas)
bag_labels = np.max(fea_target_classes, axis=1)
input_labels = fea_target_classes.astype(np.int64)
train_loader = data_utils.DataLoader(ImageBags(bags=bags,
labels=input_labels),
batch_size=1,
shuffle=True,
**loader_kwargs)
test_loader = data_utils.DataLoader(ImageBags(bags=bags,
labels=input_labels),
batch_size=1,
shuffle=False,
**loader_kwargs)
model = Attention(input_dim=input_dim)
if params.cuda:
model.cuda()
optimizer = optim.Adam(model.parameters(),
lr=params.lr,
betas=(0.9, 0.999),
weight_decay=params.reg)
def train(epoch):
model.train()
train_loss = 0.
train_error = 0.
for batch_idx, (data, label) in enumerate(train_loader):
bag_label = label[0]
if params.cuda:
data, bag_label = data.cuda(), bag_label.cuda()
data, bag_label = Variable(data), Variable(bag_label)
# reset gradients
optimizer.zero_grad()
# calculate loss and metrics
loss, _ = model.calculate_objective(data, bag_label)
train_loss += loss.data[0]
#error, _ = model.calculate_classification_error(data, bag_label)
#train_error += error
# backward pass
loss.backward()
# step
optimizer.step()
train_loss /= len(train_loader)
#print('epoch: {}, loss: {}'.format(epoch, train_loss))
#train_error /= len(train_loader)
def test():
model.eval()
test_loss = 0.
test_error = 0.
num_success = 0
scores = np.zeros_like(fea_classes[:params.k])
for batch_idx, (data, label) in enumerate(test_loader):
bag_label = label[0]
instance_labels = label[1]
if params.cuda:
data, bag_label = data.cuda(), bag_label.cuda()
data, bag_label = Variable(data), Variable(bag_label)
loss, attention_weights = model.calculate_objective(
data, bag_label)
test_loss += loss.data[0]
#error, predicted_label = model.calculate_classification_error(data, bag_label)
#test_error += error
if batch_idx < params.k:
scores[batch_idx] = attention_weights.cpu().data.numpy()[0]
#argmax_pred = np.argmax(attention_weights.cpu().data.numpy()[0])
#val = instance_labels.numpy()[0].tolist()[argmax_pred]
#num_success += val
#print('batch idx: {}, val: {}'.format(batch_idx, val))
#print('scores: ', scores)
res = {
'boxes': fea_boxes[:params.k],
'classes': np.ones_like(fea_classes[:params.k]),
'scores': scores,
'class_agnostic': True
}
return res
gt = {}
gt['boxes'] = boxes_list[:params.k]
gt['classes'] = class_list[:params.k]
gt['target_class'] = target_class
for epoch in range(1, args.epochs + 1):
train(epoch)
res = test()
result_dict = {'groundtruth': gt, 'atnmil': res}
from rcnn_attention import evaluator
evaluator._postprocess_result_dict(result_dict)
result_dict.pop('groundtruth')
add_results(result_dict, result_lists)
if i + 1 == params.eval_num:
break
metrics = {}
from rcnn_attention import eval_util
for method, result_list in result_lists.items():
m = eval_util.evaluate_coloc_results(result_list, None)
metrics[method] = m
for k, v in metrics.items():
print('{}: {}'.format(k, v))
epoch_loss += loss.item()
return epoch_loss / len(iterator)
def epoch_time(start_time, end_time):
elapsed_time = end_time - start_time
elapsed_mins = int(elapsed_time / 60)
elapsed_secs = int(elapsed_time - (elapsed_mins * 60))
return elapsed_mins, elapsed_secs
if __name__ == "__main__":
dataset = Dataset()
train_data, valid_data, test_data, INPUT_DIM, OUTPUT_DIM = dataset.get_data()
attention = Attention(config.ENC_HID_DIM, config.DEC_HID_DIM)
encoder = Encoder(INPUT_DIM, config.ENC_EMB_DIM, config.ENC_HID_DIM, config.DEC_HID_DIM, config.N_LAYERS, config.ENC_DROPOUT)
decoder = Decoder(OUTPUT_DIM, config.DEC_EMB_DIM, config.ENC_HID_DIM, config.DEC_HID_DIM, config.N_LAYERS, config.DEC_DROPOUT, attention)
seq2seq = Seq2Seq(encoder, decoder, config.device).to(config.device)
print(seq2seq)
optimizer = optim.Adam(seq2seq.parameters())
PAD_IDX = config.target.vocab.stoi['<pad>']
criterion = nn.CrossEntropyLoss(ignore_index=PAD_IDX)
train_iterator, valid_iterator, test_iterator = BucketIterator.splits((train_data, valid_data, test_data), batch_size=config.BATCH_SIZE, device=config.device)
N_EPOCHS = 10
best_valid_loss = float('inf')
import torch
from torch import nn
import numpy as np
from model import Attention, Encoder
mha = Attention(d_model=512, num_heads=8, p=0)
encoder = Encoder(d_model=512, num_heads=8, conv_hidden_dim=128)
def print_out(Q, K, V):
temp_out, temp_attn = mha.scaled_dot_product_attention(Q, K, V)
print('Attention weights are:', temp_attn.squeeze())
print('Output is:', temp_out.squeeze())
test_K = torch.tensor([[10, 0, 0], [0, 10, 0], [0, 0, 10],
[0, 0, 10]]).float()[None, None]
test_V = torch.tensor([[1, 0, 0], [10, 0, 0], [100, 5, 0],
[1000, 6, 0]]).float()[None, None]
test_Q = torch.tensor([[0, 0, 10], [0, 10, 0], [10, 10, 0]]).float()[None,
None]
print_out(test_Q, test_K, test_V)
def train():
with tf.device('/gpu:0'):
global checkpoint_dir
train_sent1_word_index, train_sent1_dist_index, train_trigger1_word_index, train_trigger1_dist_index, train_sent2_word_index, train_sent2_dist_index, train_trigger2_word_index, train_trigger2_dist_index, train_label, train_trigger_common, train_time_diff, train_test_label = get_data(train_sents)
# test_sent1_word_index, test_sent1_dist_index, test_trigger1_word_index, test_trigger1_dist_index, test_sent2_word_index, test_sent2_dist_index, test_trigger2_word_index, test_trigger2_dist_index, test_label, test_trigger_common, test_time_diff = get_data(test_sents)
vocab_count = embedding_matrix.shape[0]
print(vocab_count)
##------------------------------------------------------------------------------------------------
## PADDING DATA
for i in range(len(train_sent1_word_index)):
train_sent1_word_index[i] = np.pad(train_sent1_word_index[i], pad_width=(0,FLAGS.max_sentence_length - len(train_sent1_word_index[i])), mode='constant', constant_values=(0, FLAGS.max_sentence_length))
for i in range(len(train_sent1_dist_index)):
train_sent1_dist_index[i] = np.pad(train_sent1_dist_index[i], pad_width=(0,FLAGS.max_sentence_length - len(train_sent1_dist_index[i])), mode='constant', constant_values=(0, FLAGS.max_sentence_length))
for i in range(len(train_trigger1_word_index)):
train_trigger1_word_index[i] = np.pad(train_trigger1_word_index[i], pad_width=(0,FLAGS.max_trigger_length - len(train_trigger1_word_index[i])), mode='constant', constant_values=(0, FLAGS.max_trigger_length))
for i in range(len(train_trigger1_word_index)):
train_trigger1_dist_index[i] = np.pad(train_trigger1_dist_index[i], pad_width=(0,FLAGS.max_trigger_length - len(train_trigger1_dist_index[i])), mode='constant', constant_values=(0, FLAGS.max_trigger_length))
for i in range(len(train_sent2_word_index)):
train_sent2_word_index[i] = np.pad(train_sent2_word_index[i], pad_width=(0,FLAGS.max_sentence_length - len(train_sent2_word_index[i])), mode='constant', constant_values=(0, FLAGS.max_sentence_length))
for i in range(len(train_sent2_dist_index)):
train_sent2_dist_index[i] = np.pad(train_sent2_dist_index[i], pad_width=(0,FLAGS.max_sentence_length - len(train_sent2_dist_index[i])), mode='constant', constant_values=(0, FLAGS.max_sentence_length))
for i in range(len(train_trigger2_word_index)):
train_trigger2_word_index[i] = np.pad(train_trigger2_word_index[i], pad_width=(0,FLAGS.max_trigger_length - len(train_trigger2_word_index[i])), mode='constant', constant_values=(0, FLAGS.max_trigger_length))
for i in range(len(train_trigger2_word_index)):
train_trigger2_dist_index[i] = np.pad(train_trigger2_dist_index[i], pad_width=(0,FLAGS.max_trigger_length - len(train_trigger2_dist_index[i])), mode='constant', constant_values=(0, FLAGS.max_trigger_length))
print("doneee")
##-----------------------------------------------------------------------------------
# TRAINING DATA
with tf.Graph().as_default():
session_conf = tf.ConfigProto()
sess = tf.Session(config=session_conf)
with sess.as_default():
# sequence_length, trigger_length, num_classes, vocab_size, word_embedding_size ,dist_embedding_size, hidden_size, attention_size, coref_size, decay_rate
##--------- CREATE MODEL----------
model = Attention(sequence_length= FLAGS.max_sentence_length,
trigger_length = FLAGS.max_trigger_length,
num_classes = 2,
vocab_size = vocab_count,
word_embedding_size = 100,
dist_embedding_size = 14,
hidden_size = FLAGS.hidden_size,
attention_size = 128,
co_ref_size = 128,
)
global_step = tf.Variable(0, name="global_step", trainable=False)
train_op = tf.train.AdamOptimizer(FLAGS.learning_rate).minimize(model.loss, global_step=global_step)
timestamp = str(int(time.time()))
out_dir = os.path.abspath(os.path.join(os.path.curdir, "runs"))
print("Writing to {}\n".format(out_dir))
loss_summary = tf.summary.scalar("loss", model.loss)
acc_summary = tf.summary.scalar("accuracy", model.accuracy)
# Train Summaries
train_summary_op = tf.summary.merge([loss_summary, acc_summary])
train_summary_dir = os.path.join(out_dir, "summaries", "train")
train_summary_writer = tf.summary.FileWriter(train_summary_dir, sess.graph)
checkpoint_dir = os.path.abspath(os.path.join(out_dir, "checkpoints"))
checkpoint_prefix = os.path.join(checkpoint_dir, "model")
if not os.path.exists(checkpoint_dir):
os.makedirs(checkpoint_dir)
saver = tf.train.Saver(tf.global_variables())
print("-----------------------------------------------------------------------------------------------")
print(checkpoint_dir)
sess.run(tf.global_variables_initializer())
sess.run(model.W_em1.assign(embedding_matrix))
#sess.run(model.embedding_init, feed_dict = {model.embedding_placeholder: embedding_matrix})
batches = make_batches(train_sent1_word_index, train_sent1_dist_index, train_trigger1_word_index, train_trigger1_dist_index, train_sent2_word_index, train_sent2_dist_index, train_trigger2_word_index, train_trigger2_dist_index, train_label,train_trigger_common,train_time_diff, train_test_label)
print(len(batches))
##------------ TRAIN BATCHES --------------
for i in range(0,1):
print("Epoch number: " + str(i))
for batch in batches:
# print(len(batches))
#print(batch[9])
feed_dict = {
model.input1_text1: batch[0],
model.input1_text2: batch[1],
model.trigger1_text1: batch[2],
model.trigger1_text2: batch[3],
model.input2_text1: batch[4],
model.input2_text2: batch[5],
model.trigger2_text1: batch[6],
model.trigger2_text2: batch[7],
model.labels: batch[8],
model.V_w: batch[10],
model.V_d: batch[11],
model.bsz_size: len(batch[0])
}
_, step, summaries, loss, accuracy = sess.run([train_op, global_step, train_summary_op,model.loss, model.accuracy], feed_dict)
#print(W_em1[0])
train_summary_writer.add_summary(summaries, step)
if step % FLAGS.display_every == 0:
time_str = datetime.datetime.now().isoformat()
print("{}: step {}, loss {:g}, acc {:g}".format(time_str, step, loss, accuracy))
print(step)
if step % 100 == 0:
path = saver.save(sess, checkpoint_prefix, global_step=step)
print("Saved model checkpoint to {}\n".format(path))
#break
# if step % FLAGS.evaluate_every == 0:
# print("\nEvaluation:")
path = saver.save(sess, checkpoint_prefix, global_step=step)
print("Saved model checkpoint to {}\n".format(path))
print("Accuracy {}/{} ({:.2f}%), TPR {:.2f}%, TNR {:.2f}%".format(
correct, test_num, correct / test_num * 100, 100 * TPR, 100 * TNR))
return res
if __name__ == "__main__":
utilData = UtilData("./data/image.txt")
train_names = utilData.train_names
test_names = utilData.test_names
img_info = utilData.img_info
resList = []
for i in range(5):
model = Attention.Attention(args)
if args.cuda:
model.cuda()
optimizer = optim.Adam(model.parameters(),
lr=args.lr,
betas=(0.9, 0.999),
weight_decay=args.reg)
criteration = nn.CrossEntropyLoss()
print('cross-validation: {}'.format(i))
train_loader = data_utils.DataLoader(
dataLoader(
train_name=train_names[i],
test_name=test_names[i],
img_info=img_info,
plotter.plot('attention_accuracy', 'val', 'Attention Accuracy', epoch,
val_acc)
plotter.plot('attention_auc', 'val', 'Attention AUC', epoch, val_auc)
plotter.plot('attention_f1', 'val', 'Attention F1', epoch, val_f1)
plotter.save(['Tutorial Plots Attention'])
time_elapsed = time.time() - since
print('Training complete in {:.0f}m {:.0f}s'.format(
time_elapsed // 60, time_elapsed % 60))
return model
# In[24]:
if __name__ == "__main__":
# model_ft = Resnet_Classifier()
model_ft = Attention(path="model34")
model_ft = model_ft.to(device)
# for param in model_ft.parameters():
# print(param.requires_grad)
# print(param,size())
criterion = nn.CrossEntropyLoss(
weight=torch.Tensor([1.0 / 165.0, 1.0 / 122.0]).to(device))
optimizer_ft = optim.Adam(model_ft.parameters(), lr=0.0001)
scheduler = lr_scheduler.StepLR(optimizer_ft, step_size=10, gamma=0.1)
# model_ft = train_model(model_ft, criterion, optimizer_ft, scheduler, num_epochs=200)
global plotter
plotter = utils.VisdomLinePlotter(env_name='Tutorial Plots Resnet')
# In[ ]:
print('Load Train and Test Set')
loader_kwargs = {'num_workers': 1, 'pin_memory': True} if args.cuda else {}
train_loader = data_utils.DataLoader(BarleyBatches(train=True),
batch_size=1,
shuffle=True,
**loader_kwargs)
test_loader = data_utils.DataLoader(BarleyBatches(train=False),
batch_size=1,
shuffle=False,
**loader_kwargs)
print('Init Model')
if args.model == 'attention':
model = Attention()
elif args.model == 'gated_attention':
model = GatedAttention()
if args.cuda:
model.cuda()
optimizer = optim.Adam(model.parameters(),
lr=args.lr,
betas=(0.9, 0.999),
weight_decay=args.reg)
writer = SummaryWriter()
def train(epoch):
model.train()
train_loss = 0.
shuffle=True,
**loader_kwargs)
test_loader = data_utils.DataLoader(MnistBags(target_number=args.target_number,
mean_bag_length=args.mean_bag_length,
var_bag_length=args.var_bag_length,
num_bag=args.num_bags_test,
seed=args.seed,
train=False),
batch_size=1,
shuffle=False,
**loader_kwargs)
print('Init Model')
if args.model=='attention':
model = Attention()
elif args.model=='gated_attention':
model = GatedAttention()
if args.cuda:
model.cuda()
optimizer = optim.Adam(model.parameters(), lr=args.lr, betas=(0.9, 0.999), weight_decay=args.reg)
def train(epoch):
model.train()
train_loss = 0.
train_error = 0.
for batch_idx, (data, label) in enumerate(train_loader):
bag_label = label[0]
if args.cuda:
def main():
make_deterministic()
# region Prepare data
with Timer('\nData preparation time: %s\n'):
ru_lang = Language()
en_lang = Language()
yandex = Yandex(
'datasets/yandex/corpus.en_ru.1m.ru',
'datasets/yandex/corpus.en_ru.1m.en',
ru_lang,
en_lang,
data_slice=H.dataset_slice,
)
paracrawl = ParaCrawl(
'datasets/paracrawl/en-ru.txt',
ru_lang,
en_lang,
data_slice=slice(0),
)
low = ru_lang.lower_than(H.ru_word_count_minimum)
infrequent_words_n = max(
ceil(ru_lang.words_n * H.infrequent_words_percent), len(low))
if infrequent_words_n > 0:
ru_lang.drop_words(ru_lang.lowk(infrequent_words_n))
print(
f'{infrequent_words_n:,} infrequent Russian words are dropped')
low = en_lang.lower_than(H.en_word_count_minimum)
if len(low) > 0:
en_lang.drop_words(*low)
print(f'{len(low):,} infrequent English words are dropped')
print(
f'Russian language: {ru_lang.words_n:,} words, {ru_lang.sentence_length:,} words in a sentence'
)
print(
f'English language: {en_lang.words_n:,} words, {en_lang.sentence_length:,} words in a sentence'
)
batch = H.batch_size
dataset = ConcatDataset((yandex, paracrawl))
loader = DataLoader(dataset, batch, shuffle=True)
# endregion
# region Models and optimizers
model = Seq2Seq(
Encoder(ru_lang.words_n, H.encoder_embed_dim, H.encoder_hidden_dim,
H.encoder_bi, H.decoder_hd),
Attention(H.encoder_hd, H.decoder_hd),
Decoder(en_lang.words_n, H.decoder_embed_dim, H.decoder_hidden_dim,
H.encoder_hd),
).to(Device).train()
optimizer = Adam(model.parameters(), lr=H.learning_rate)
criterion = CrossEntropyLoss(ignore_index=Token_PAD, reduction='sum')
# endregion
# region Training
teaching_percent = H.teaching_percent
total = len(dataset)
log_interval = max(5, round(total / batch / 1000))
for epoch in range(1, H.epochs + 1):
with Printer() as printer:
printer.print(f'Train epoch {epoch}: starting...')
for i, ((ru, ru_l), en_sos, en_eos) in enumerate(loader, 1):
# Zero the parameter gradients
optimizer.zero_grad()
# Run data through model
predictions = model(ru, ru_l, en_sos, teaching_percent)
# Calculate loss
loss = criterion(predictions, en_eos)
# Back propagate and perform optimization
loss.backward()
clip_grad_norm_(model.parameters(), H.gradient_norm_clip)
optimizer.step()
# Print log
if i % log_interval == 0:
printer.print(
f'Train epoch {epoch}: {i * batch / total:.1%} [{i * batch:,}/{total:,}]'
)
printer.print(f'Train epoch {epoch}: completed')
# endregion
torch.save(
(
ru_lang.__getnewargs__(),
en_lang.__getnewargs__(),
model.cpu().eval().data,
),
'data/data.pt',
)
evaluate(model.to(Device), ru_lang, en_lang,
'datasets/yandex/corpus.en_ru.1m.ru',
slice(H.dataset_slice.stop + 1, H.dataset_slice.stop + 1 + 100))
def train(config_path, resume=True):
# Load the parameters
param_dict, rep_param_dict = load_params(config_path)
# use cuda flag
use_cuda = True
"""
the tranining directory
"""
# load data
TRAIN_DIR01 = "{}/MQ2007/S1/".format(param_dict["data_base_path"])
TRAIN_DIR02 = "{}/MQ2007/S2/".format(param_dict["data_base_path"])
TRAIN_DIR03 = "{}/MQ2007/S3/".format(param_dict["data_base_path"])
TRAIN_DIR04 = "{}/MQ2007/S4/".format(param_dict["data_base_path"])
TRAIN_DIR05 = "{}/MQ2007/S5/".format(param_dict["data_base_path"])
TEST_DIR01 = '{}/MQ2007/S1/'.format(param_dict["data_base_path"])
TEST_DIR02 = '{}/MQ2007/S2/'.format(param_dict["data_base_path"])
TEST_DIR03 = '{}/MQ2007/S3/'.format(param_dict["data_base_path"])
TEST_DIR04 = '{}/MQ2007/S4/'.format(param_dict["data_base_path"])
TEST_DIR05 = '{}/MQ2007/S5/'.format(param_dict["data_base_path"])
train_files01 = glob.glob("{}/data0.pkl".format(TRAIN_DIR01))
train_files02 = glob.glob("{}/data0.pkl".format(TRAIN_DIR02))
train_files03 = glob.glob("{}/data0.pkl".format(TRAIN_DIR03))
train_files04 = glob.glob("{}/data0.pkl".format(TRAIN_DIR04))
train_files05 = glob.glob("{}/data0.pkl".format(TRAIN_DIR05))
test_files01 = glob.glob("{}/testdata0.pkl".format(TEST_DIR01))
test_files02 = glob.glob("{}/testdata0.pkl".format(TEST_DIR02))
test_files03 = glob.glob("{}/testdata0.pkl".format(TEST_DIR03))
test_files04 = glob.glob("{}/testdata0.pkl".format(TEST_DIR04))
test_files05 = glob.glob("{}/testdata0.pkl".format(TEST_DIR05))
fold = param_dict["fold"]
model_base_path = param_dict['model_base_path']
model_name_str = param_dict['model_name_str']
q_len = param_dict["q_len"]
d_len = param_dict["d_len"]
if fold == 1:
train_files = train_files01 + train_files02 + train_files03
test_files = test_files04[0] # a path list ['/...'] only take the str
rel_path = '{}/{}/tmp/test/S4.qrels'.format(model_base_path,
model_name_str)
elif fold == 2:
train_files = train_files02 + train_files03 + train_files04
test_files = test_files05[0]
rel_path = '{}/{}/tmp/test/S5.qrels'.format(model_base_path,
model_name_str)
elif fold == 3:
train_files = train_files03 + train_files04 + train_files05
test_files = test_files01[0]
rel_path = '{}/{}/tmp/test/S1.qrels'.format(model_base_path,
model_name_str)
elif fold == 4:
train_files = train_files04 + train_files05 + train_files01
test_files = test_files02[0]
rel_path = '{}/{}/tmp/test/S2.qrels'.format(model_base_path,
model_name_str)
elif fold == 5:
train_files = train_files05 + train_files01 + train_files02
test_files = test_files03[0]
rel_path = '{}/{}/tmp/test/S3.qrels'.format(model_base_path,
model_name_str)
else:
raise ValueError("wrong fold num {}".format(fold))
"""
Build the model
"""
emb_size = param_dict['emb_size']
num_heads = param_dict['num_heads']
kernel_size = rep_param_dict['kernel_size']
filt_size = rep_param_dict['filt_size']
vocab_size = param_dict['vocab_size']
output_dim = rep_param_dict['output_dim']
hidden_size = param_dict['hidden_size']
batch_size = param_dict['batch_size']
preemb = param_dict['preemb']
emb_path = param_dict['emb_path']
hinge_margin = param_dict['hinge_margin']
model = Attention(emb_size=emb_size,
query_length=q_len,
doc_length=d_len,
num_heads=num_heads,
kernel_size=kernel_size,
filter_size=filt_size,
vocab_size=vocab_size,
dropout=0.0,
qrep_dim=output_dim,
hidden_size=hidden_size,
batch_size=batch_size,
preemb=preemb,
emb_path=emb_path)
if use_cuda:
model.cuda()
# optimizer
optimizer = optim.Adam(model.parameters(),
lr=param_dict['learning_rate'],
betas=(param_dict['beta1'], param_dict['beta2']),
weight_decay=param_dict['alpha'])
# loss func
loss = nn.MarginRankingLoss(margin=hinge_margin, size_average=True)
# experiment
print("Experiment")
if resume == False:
f_log = open(
'{}/{}/logs/training_log.txt'.format(model_base_path,
model_name_str), 'w+', 1)
valid_log = open(
'{}/{}/logs/valid_log.txt'.format(model_base_path, model_name_str),
'w+', 1)
else:
f_log = open(
'{}/{}/logs/training_log.txt'.format(model_base_path,
model_name_str), 'a+', 1)
valid_log = open(
'{}/{}/logs/valid_log.txt'.format(model_base_path, model_name_str),
'a+', 1)
# model_file
model_file = '{}/{}/saves/model_file'.format(model_base_path,
model_name_str)
"""
TRAINING
"""
# define the parameters
n_epoch = param_dict['n_epoch']
# init best validation MAP value
best_MAP = 0.0
best_NDCG1 = 0.0
batch_count_tr = 0
# restore saved parameter if resume_training is true
if resume == True:
model_file = '{}/{}/saves/model_file'.format(model_base_path,
model_name_str)
model.load_state_dict(torch.load(model_file))
with open(
'{}/{}/saves/best_MAP.pkl'.format(model_base_path,
model_name_str),
'rb') as f_MAP:
best_MAP = pickle.load(f_MAP)
print("loaded model, and resume training now")
for epoch in range(1, n_epoch + 1):
'''load_data'''
for f in train_files:
data = load_dataset(f)
print("loaded {}".format(f))
'''prepare_data'''
[Q, D_pos, D_neg, L] = pair_data_generator(data, q_len)
valid_data = load_dataset(test_files)
''' shuffle data'''
train_data = list_shuffle(Q, D_pos, D_neg, L)
'''training func'''
num_batch = len(train_data[0]) // batch_size
for batch_count in range(num_batch):
Q = train_data[0][batch_size * batch_count:batch_size *
(batch_count + 1)]
D_pos = train_data[1][batch_size * batch_count:batch_size *
(batch_count + 1)]
D_neg = train_data[2][batch_size * batch_count:batch_size *
(batch_count + 1)]
L = train_data[3][batch_size * batch_count:batch_size *
(batch_count + 1)]
if use_cuda:
Q = Variable(torch.LongTensor(
pad_batch_list(Q, max_len=q_len, padding_id=0)),
requires_grad=False).cuda()
D_pos = Variable(torch.LongTensor(
pad_batch_list(D_pos, max_len=d_len, padding_id=0)),
requires_grad=False).cuda()
D_neg = Variable(torch.LongTensor(
pad_batch_list(D_neg, max_len=d_len, padding_id=0)),
requires_grad=False).cuda()
L = Variable(torch.FloatTensor(L),
requires_grad=False).cuda()
else:
Q = Variable(torch.LongTensor(
pad_batch_list(Q, max_len=q_len, padding_id=0)),
requires_grad=False)
D_pos = Variable(torch.LongTensor(
pad_batch_list(D_pos, max_len=d_len, padding_id=0)),
requires_grad=False)
D_neg = Variable(torch.LongTensor(
pad_batch_list(D_neg, max_len=d_len, padding_id=0)),
requires_grad=False)
L = Variable(torch.FloatTensor(L), requires_grad=False)
# run on this batch
optimizer.zero_grad()
t1 = time.time()
q_mask, d_pos_mask, d_neg_mask = model.generate_mask(
Q, D_pos, D_neg)
"""
need to do the modification i the model.py
"""
S_pos, S_neg = model(Q, D_pos, D_neg, q_mask, d_pos_mask,
d_neg_mask)
Loss = hinge_loss(S_pos, S_neg, 1.0)
Loss.backward()
optimizer.step()
t2 = time.time()
batch_count_tr += 1
print("epoch {} batch {} training cost: {} using {}s" \
.format(epoch, batch_count+1, Loss.data[0], t2-t1))
f_log.write("epoch {} batch {} training cost: {}, using {}s".
format(epoch, batch_count + 1, Loss.data[0], t2 -
t1) + '\n')
"""
evaluate part
"""
if batch_count_tr % 20 == 0:
if valid_data is not None:
MAP, NDCGs = evaluate(config_path,
model,
valid_data,
rel_path,
mode="valid")
print(MAP, NDCGs)
valid_log.write(
"epoch {}, batch {}, MAP: {}, NDCGs: {} {} {} {}".
format(epoch + 1, batch_count + 1, MAP,
NDCGs[1][0], NDCGs[1][1], NDCGs[1][2],
NDCGs[1][3]))
if MAP > best_MAP: # save this best model
best_MAP = MAP
with open(
'{}/{}/saves/best_MAP.pkl'.format(
model_base_path, model_name_str),
'wb') as f_MAP:
pickle.dump(best_MAP, f_MAP)
# save model params after several epoch
model_file = '{}/{}/saves/model_file'.format(
model_base_path, model_name_str)
torch.save(model.state_dict(), model_file)
print("successfully saved model to the path {}".
format(model_file))
valid_log.write("{} {} {} {}".format(
NDCGs[1][0], NDCGs[1][1], NDCGs[1][2],
NDCGs[1][3]))
valid_log.write(" MAP: {}".format(MAP))
valid_log.write('\n')
f_log.close()
valid_log.close()
