Esempio n. 1
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    def __init__(self, layers, ceptron):
        """
        :parameter layers: a list of layers, by the type of base_layer
        """
        assert type(layers) == list
        self.layers = layers
        self.weights = self.init_weights()
        self.biases = self.init_biases()
        self.ceptron = ceptron
        self.depth = len(layers) - 1

        # init my_theano functions
        self.x = T.matrix('x')
        self.y = T.ivector('y')
        self.index = T.iscalar('index')
        self.p_y = self.forward(self.x)

        self.train_model = None
        # self.set_weights_biases = my_theano.function(self._make_updates(self.weights, self.biases))

        # set early stopping patience
        self.patience = 5
        self.patience_inc_coef = -0.1
        self.lest_valid_error = np.inf

        # set pickle file path
        self.file_name = os.path.splitext(os.path.basename(sys.argv[0]))[0]
        self.pickle_file = conf.DATA_PATH + self.file_name + '.pkl'
Esempio n. 2
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    def __init__(self, layers: [base_layer.AbstractLayer]):
        """
        :parameter layers: a list of tuple for init layers
        """
        self.layers = layers
        self.weighted_layers = self.get_weighted_layers()
        self.rng = np.random.RandomState(1234)
        self.depth = len(self.weighted_layers)

        # set pickle file path
        self.file_name = os.path.splitext(os.path.basename(sys.argv[0]))[0]
        self.pickle_file = conf.DATA_PATH + self.file_name + '.pkl'

        self.connect()
        # self.reset_params()
        self.init_weights_baises()
        self.weights, self.biases = self._get_weights_biases()

        # l1 and l2 regularization
        self.l1, self.l2 = self.init_regularization()

        # init my_theano functions
        self.x = T.matrix('x')
        self.y = T.ivector('y')
        self.index = T.iscalar('index')

        self.train_model = None
        self.valid_model = None
        self.test_model = None

        # set early stopping patience
        self.patience = 20
        self.patience_inc_coef = -0.1
        self.lest_valid_error = np.inf
Esempio n. 3
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    def __init__(self, layers: [base_layer.AbstractLayer]):
        """
        :parameter layers: a list of tuple for init layers
        """
        self.layers = layers
        self.rng = np.random.RandomState(1234)
        self.depth = len(self.layers) - 1

        self.weights = self.init_weights()
        self.biases = self.init_biases()

        # l1 and l2 regularization
        self.l1, self.l2 = self.init_regularization()

        # init my_theano functions
        self.x = T.matrix('x')
        self.y = T.ivector('y')
        self.index = T.iscalar('index')
        self.p_y = self.forward(self.x)

        self.train_model = None
        self.valid_model = None
        self.test_model = None
        # self.set_weights_biases = my_theano.function(self._make_updates(self.weights, self.biases))

        # set early stopping patience
        self.patience = 20
        self.patience_inc_coef = -0.1
        self.lest_valid_error = np.inf

        # set pickle file path
        self.file_name = os.path.splitext(os.path.basename(sys.argv[0]))[0]
        self.pickle_file = conf.DATA_PATH + self.file_name + '.pkl'
Esempio n. 4
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def sgd_optimization_mnist(learning_rate=0.13, n_epochs=1000,
                           dataset='data/mnist/mnist.pkl.gz',
                           batch_size=600):
    """
    Demonstrate stochastic gradient descent optimization of a log-linear
    model

    This is demonstrated on MNIST.

    :type learning_rate: float
    :param learning_rate: learning rate used (factor for the stochastic
                          gradient)

    :type n_epochs: int
    :param n_epochs: maximal number of epochs to run the optimizer

    :type dataset: string
    :param dataset: the path of the MNIST dataset file from
                 http://www.iro.umontreal.ca/~lisa/deep/data/mnist/mnist.pkl.gz

    """
    datasets = load_data(dataset)

    train_set_x, train_set_y = datasets[0]
    valid_set_x, valid_set_y = datasets[1]
    test_set_x, test_set_y = datasets[2]

    # compute number of minibatches for training, validation and testing
    n_train_batches = train_set_x.get_value(borrow=True).shape[0] // batch_size
    n_valid_batches = valid_set_x.get_value(borrow=True).shape[0] // batch_size
    n_test_batches = test_set_x.get_value(borrow=True).shape[0] // batch_size

    ######################
    # BUILD ACTUAL MODEL #
    ######################
    print('... building the model')

    # allocate symbolic variables for the data
    index = T.lscalar()  # index to a [mini]batch

    # generate symbolic variables for input (x and y represent a
    # minibatch)
    x = T.matrix('x')  # data, presented as rasterized images
    y = T.ivector('y')  # labels, presented as 1D vector of [int] labels

    # construct the logistic regression class
    # Each MNIST image has size 28*28
    classifier = LogisticRegression(input=x, n_in=28 * 28, n_out=10)

    # the cost we minimize during training is the negative log likelihood of
    # the model in symbolic format
    cost = classifier.negative_log_likelihood(y)

    # compiling a Theano function that computes the mistakes that are made by
    # the model on a minibatch
    test_model = my_theano.function(
        inputs=[index],
        outputs=classifier.errors(y),
        givens={
            x: test_set_x[index * batch_size: (index + 1) * batch_size],
            y: test_set_y[index * batch_size: (index + 1) * batch_size]
        }
    )

    validate_model = my_theano.function(
        inputs=[index],
        outputs=classifier.errors(y),
        givens={
            x: valid_set_x[index * batch_size: (index + 1) * batch_size],
            y: valid_set_y[index * batch_size: (index + 1) * batch_size]
        }
    )

    # compute the gradient of cost with respect to theta = (W,b)
    g_W = T.grad(cost=cost, wrt=classifier.W)
    g_b = T.grad(cost=cost, wrt=classifier.b)

    # start-snippet-3
    # specify how to update the parameters of the model as a list of
    # (variable, update expression) pairs.
    updates = [(classifier.W, classifier.W - learning_rate * g_W),
               (classifier.b, classifier.b - learning_rate * g_b)]

    # compiling a Theano function `train_model` that returns the cost, but in
    # the same time updates the parameter of the model based on the rules
    # defined in `updates`
    train_model = my_theano.function(
        inputs=[index],
        outputs=cost,
        updates=updates,
        givens={
            x: train_set_x[index * batch_size: (index + 1) * batch_size],
            y: train_set_y[index * batch_size: (index + 1) * batch_size]
        }
    )
    # end-snippet-3

    ###############
    # TRAIN MODEL #
    ###############
    print('... training the model')
    # early-stopping parameters
    patience = 5000  # look as this many examples regardless
    patience_increase = 2  # wait this much longer when a new best is
                                  # found
    improvement_threshold = 0.995  # a relative improvement of this much is
                                  # considered significant
    validation_frequency = min(n_train_batches, patience // 2)
                                  # go through this many
                                  # minibatche before checking the network
                                  # on the validation set; in this case we
                                  # check every epoch

    best_validation_loss = numpy.inf
    test_score = 0.
    start_time = timeit.default_timer()

    done_looping = False
    epoch = 0
    while (epoch < n_epochs) and (not done_looping):
        epoch = epoch + 1
        for minibatch_index in range(n_train_batches):

            minibatch_avg_cost = train_model(minibatch_index)
            # iteration number
            iter = (epoch - 1) * n_train_batches + minibatch_index

            if (iter + 1) % validation_frequency == 0:
                # compute zero-one loss on validation set
                validation_losses = [validate_model(i)
                                     for i in range(n_valid_batches)]
                this_validation_loss = numpy.mean(validation_losses)

                print(
                    'epoch %i, minibatch %i/%i, validation error %f %%' %
                    (
                        epoch,
                        minibatch_index + 1,
                        n_train_batches,
                        this_validation_loss * 100.
                    )
                )

                # if we got the best validation score until now
                if this_validation_loss < best_validation_loss:
                    #improve patience if loss improvement is good enough
                    if this_validation_loss < best_validation_loss *  \
                       improvement_threshold:
                        patience = max(patience, iter * patience_increase)

                    best_validation_loss = this_validation_loss
                    # test it on the test set

                    test_losses = [test_model(i)
                                   for i in range(n_test_batches)]
                    test_score = numpy.mean(test_losses)

                    print(
                        (
                            '     epoch %i, minibatch %i/%i, test error of'
                            ' best model %f %%'
                        ) %
                        (
                            epoch,
                            minibatch_index + 1,
                            n_train_batches,
                            test_score * 100.
                        )
                    )

                    # save the best model
                    with open('best_model.pkl', 'wb') as f:
                        pickle.dump(classifier, f)

            if patience <= iter:
                done_looping = True
                break

    end_time = timeit.default_timer()
    print(
        (
            'Optimization complete with best validation score of %f %%,'
            'with test performance %f %%'
        )
        % (best_validation_loss * 100., test_score * 100.)
    )
    print('The code run for %d epochs, with %f epochs/sec' % (
        epoch, 1. * epoch / (end_time - start_time)))
    print(('The code for file ' +
           os.path.split(__file__)[1] +
           ' ran for %.1fs' % ((end_time - start_time))), file=sys.stderr)
Esempio n. 5
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File: mlp.py Progetto: yxiaohan/nn
def test_mlp(learning_rate=0.01, L1_reg=0.00, L2_reg=0.0001, n_epochs=1000,
             dataset='mnist.pkl.gz', batch_size=600, n_hidden=50):
    """
    Demonstrate stochastic gradient descent optimization for a multilayer
    perceptron

    This is demonstrated on MNIST.

    :type learning_rate: float
    :param learning_rate: learning rate used (factor for the stochastic
    gradient

    :type L1_reg: float
    :param L1_reg: L1-norm's weight when added to the cost (see
    regularization)

    :type L2_reg: float
    :param L2_reg: L2-norm's weight when added to the cost (see
    regularization)

    :type n_epochs: int
    :param n_epochs: maximal number of epochs to run the optimizer

    :type dataset: string
    :param dataset: the path of the MNIST dataset file from
                 http://www.iro.umontreal.ca/~lisa/deep/data/mnist/mnist.pkl.gz


   """
    datasets = mnist.MNIST()

    train_set_x, train_set_y = datasets.theano_train_set()
    valid_set_x, valid_set_y = datasets.theano_valid_set()
    test_set_x, test_set_y = datasets.theano_test_set()

    # compute number of minibatches for training, validation and testing
    n_train_batches = train_set_x.get_value(borrow=True).shape[0] // batch_size
    n_valid_batches = valid_set_x.get_value(borrow=True).shape[0] // batch_size
    n_test_batches = test_set_x.get_value(borrow=True).shape[0] // batch_size

    ######################
    # BUILD ACTUAL MODEL #
    ######################
    print('... building the model')

    # allocate symbolic variables for the data
    index = T.lscalar()  # index to a [mini]batch
    x = T.matrix('x')  # the data is presented as rasterized images
    y = T.ivector('y')  # the labels are presented as 1D vector of
                        # [int] labels

    rng = numpy.random.RandomState(1234)

    # construct the MLP class
    classifier = MLP(
        rng=rng,
        input=x,
        n_in=28 * 28,
        n_hidden=n_hidden,
        n_out=10
    )

    # start-snippet-4
    # the cost we minimize during training is the negative log likelihood of
    # the model plus the regularization terms (L1 and L2); cost is expressed
    # here symbolically
    cost = (
        classifier.negative_log_likelihood(y)
        + L1_reg * classifier.L1
        + L2_reg * classifier.L2_sqr
    )
    # end-snippet-4

    # compiling a Theano function that computes the mistakes that are made
    # by the model on a minibatch
    test_model = my_theano.function(
        inputs=[index],
        outputs=classifier.errors(y),
        givens={
            x: test_set_x[index * batch_size:(index + 1) * batch_size],
            y: test_set_y[index * batch_size:(index + 1) * batch_size]
        }
    )

    validate_model = my_theano.function(
        inputs=[index],
        outputs=classifier.errors(y),
        givens={
            x: valid_set_x[index * batch_size:(index + 1) * batch_size],
            y: valid_set_y[index * batch_size:(index + 1) * batch_size]
        }
    )

    # start-snippet-5
    # compute the gradient of cost with respect to theta (sorted in params)
    # the resulting gradients will be stored in a list gparams
    gparams = [T.grad(cost, param) for param in classifier.params]

    # specify how to update the parameters of the model as a list of
    # (variable, update expression) pairs

    # given two lists of the same length, A = [a1, a2, a3, a4] and
    # B = [b1, b2, b3, b4], zip generates a list C of same size, where each
    # element is a pair formed from the two lists :
    #    C = [(a1, b1), (a2, b2), (a3, b3), (a4, b4)]
    updates = [
        (param, param - learning_rate * gparam)
        for param, gparam in zip(classifier.params, gparams)
    ]

    # compiling a Theano function `train_model` that returns the cost, but
    # in the same time updates the parameter of the model based on the rules
    # defined in `updates`
    train_model = my_theano.function(
        inputs=[index],
        outputs=cost,
        updates=updates,
        givens={
            x: train_set_x[index * batch_size: (index + 1) * batch_size],
            y: train_set_y[index * batch_size: (index + 1) * batch_size]
        }
    )
    # end-snippet-5

    ###############
    # TRAIN MODEL #
    ###############
    print('... training')

    # early-stopping parameters
    patience = 10000  # look as this many examples regardless
    patience_increase = 2  # wait this much longer when a new best is
                           # found
    improvement_threshold = 0.995  # a relative improvement of this much is
                                   # considered significant
    validation_frequency = min(n_train_batches, patience // 2)
                                  # go through this many
                                  # minibatche before checking the network
                                  # on the validation set; in this case we
                                  # check every epoch

    best_validation_loss = numpy.inf
    best_iter = 0
    test_score = 0.
    start_time = timeit.default_timer()

    epoch = 0
    done_looping = False

    while (epoch < n_epochs) and (not done_looping):
        epoch = epoch + 1
        for minibatch_index in range(n_train_batches):

            minibatch_avg_cost = train_model(minibatch_index)
            # iteration number
            iter = (epoch - 1) * n_train_batches + minibatch_index

            if (iter + 1) % validation_frequency == 0:
                # compute zero-one loss on validation set
                validation_losses = [validate_model(i) for i
                                     in range(n_valid_batches)]
                this_validation_loss = numpy.mean(validation_losses)

                print(
                    'epoch %i, minibatch %i/%i, validation error %f %%' %
                    (
                        epoch,
                        minibatch_index + 1,
                        n_train_batches,
                        this_validation_loss * 100.
                    )
                )

                # if we got the best validation score until now
                if this_validation_loss < best_validation_loss:
                    #improve patience if loss improvement is good enough
                    if (
                        this_validation_loss < best_validation_loss *
                        improvement_threshold
                    ):
                        patience = max(patience, iter * patience_increase)

                    best_validation_loss = this_validation_loss
                    best_iter = iter

                    # test it on the test set
                    test_losses = [test_model(i) for i
                                   in range(n_test_batches)]
                    test_score = numpy.mean(test_losses)

                    print(('     epoch %i, minibatch %i/%i, test error of '
                           'best model %f %%') %
                          (epoch, minibatch_index + 1, n_train_batches,
                           test_score * 100.))

            if patience <= iter:
                done_looping = True
                break

    end_time = timeit.default_timer()
    print(('Optimization complete. Best validation score of %f %% '
           'obtained at iteration %i, with test performance %f %%') %
          (best_validation_loss * 100., best_iter + 1, test_score * 100.))
    print(('The code for file ' +
           os.path.split(__file__)[1] +
           ' ran for %.2fm / %f epochs per sec' % ((end_time - start_time) / 60., epoch/(end_time-start_time))), file=sys.stderr)