def test_BRAINSMush_outputs():
output_map = dict(outputMask=dict(),
outputVolume=dict(),
outputWeightsFile=dict(),
)
outputs = BRAINSMush.output_spec()
for key, metadata in output_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(outputs.traits()[key], metakey), value
def test_BRAINSMush_inputs():
input_map = dict(args=dict(argstr='%s',
),
boundingBoxSize=dict(argstr='--boundingBoxSize %s',
sep=',',
),
boundingBoxStart=dict(argstr='--boundingBoxStart %s',
sep=',',
),
desiredMean=dict(argstr='--desiredMean %f',
),
desiredVariance=dict(argstr='--desiredVariance %f',
),
environ=dict(nohash=True,
usedefault=True,
),
ignore_exception=dict(nohash=True,
usedefault=True,
),
inputFirstVolume=dict(argstr='--inputFirstVolume %s',
),
inputMaskVolume=dict(argstr='--inputMaskVolume %s',
),
inputSecondVolume=dict(argstr='--inputSecondVolume %s',
),
lowerThresholdFactor=dict(argstr='--lowerThresholdFactor %f',
),
lowerThresholdFactorPre=dict(argstr='--lowerThresholdFactorPre %f',
),
numberOfThreads=dict(argstr='--numberOfThreads %d',
),
outputMask=dict(argstr='--outputMask %s',
hash_files=False,
),
outputVolume=dict(argstr='--outputVolume %s',
hash_files=False,
),
outputWeightsFile=dict(argstr='--outputWeightsFile %s',
hash_files=False,
),
seed=dict(argstr='--seed %s',
sep=',',
),
terminal_output=dict(nohash=True,
),
upperThresholdFactor=dict(argstr='--upperThresholdFactor %f',
),
upperThresholdFactorPre=dict(argstr='--upperThresholdFactorPre %f',
),
)
inputs = BRAINSMush.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value