def checkOAfile(afile, verbose=0):
""" Return pointer to array file
Automatically check for compressed array files
"""
af = oapackage.arrayfile_t(afile, verbose)
nm = af.filename
if af.isopen():
return nm
else:
return None
def checkOAfile(afile, verbose=0):
""" Return pointer to array file
Automatically check for compressed array files
Args:
afile (str): location of array file
Returns:
arrayfile_t or None
"""
af = oapackage.arrayfile_t(afile, verbose)
nm = af.filename
if af.isopen():
return nm
else:
return None
def oaIsBinary(afile):
""" Return true if array file is in binary format """
af = oapackage.arrayfile_t(afile)
ret = af.isbinary()
af.closefile()
return ret
def oainfo(afile, verbose=1):
""" Print information about a file containing arrays """
af = oapackage.arrayfile_t(afile, verbose)
print(af.showstr())
af.closefile()
def oaIsBinary(filename):
""" Return true if array file is in binary format """
af = oapackage.arrayfile_t(filename)
ret = af.isbinary()
af.closefile()
return ret
def oainfo(filename, verbose=1):
""" Print information about a file containing arrays """
af = oapackage.arrayfile_t(filename, verbose)
print(af.showstr())
af.closefile()
oaformat=args.format
inputfile=args.inputfile
outputfile=args.outputfile
#%%
if __name__=='__main__' and 0:
# testing
inputfile='/home/eendebakpt/tmp/mee3.oa'
outputfile='/home/eendebakpt/tmp/test.oa'
fname='eoc'
oaformat='T'
verbose=2
#%% Load file
fmode=oapackage.arrayfile_t.parseModeString(oaformat)
infile = oapackage.arrayfile_t(inputfile)
narrays=infile.narrays
#outfile = oapackage.arrayfile_t(outputfile, infile.nrows, infile.ncols, -1, fmode )
if not infile.isopen():
raise Exception('could not open file %s' % inputfile)
print('oaselect: reading %d arrays from %s' % (infile.narrays, inputfile) )
#%% Loop over the arrays
outlist=[]
if narrays==-1:
narrays=oapackage.arrayfile_t.NARRAYS_MAX
for ii in range(narrays):
oapackage.tprint('oaselect: parse array %d/%d' % (ii, narrays) )