def actions():
app = application.get_app()
for action in app.actions:
yield action
for plugin in plugins.plugins():
for action in plugin.actions:
yield action
def actions():
app = application.get_app()
for action in app.actions:
yield action
for plugin in plugins.plugins():
for action in plugin.actions:
yield action
def write_to_many_files(self, data):
app_dir = application.get_app().directory()
for listname in data:
filepath = os.path.abspath(
os.path.join(app_dir, 'data', 'lookuplists',
'{0}.json'.format(listname)))
contents = {listname: data[listname]}
self.write_to_file(contents, filepath)
def styles():
app = application.get_app()
for style in app.get_styles():
if style.endswith(".scss"):
mime_type = "text/x-scss"
else:
mime_type = "text/css"
yield style, mime_type
def yield_property(property_name):
app = application.get_app()
app_and_plugins = itertools.chain(plugins.OpalPlugin.list(), [app])
for plugin in app_and_plugins:
excluded_tracking_prefixes = getattr(plugin, property_name, [])
for i in excluded_tracking_prefixes:
yield i
def yield_property(property_name):
app = application.get_app()
app_and_plugins = itertools.chain(plugins.OpalPlugin.list(), [app])
for plugin in app_and_plugins:
excluded_tracking_prefixes = getattr(plugin, property_name, [])
for i in excluded_tracking_prefixes:
yield i
def from_component(self, component):
# Start with the initial lookuplists.json
filename = ffs.Path(LOOKUPLIST_LOCATION.format(component.directory()))
self.load(self.from_path(filename))
# then work throught the lookuplists we know about
for lookuplist in lookuplists.LookupList.__subclasses__():
path = ffs.Path("{0}/data/lookuplists/{1}.json".format(
application.get_app().directory(), lookuplist.get_api_name()))
self.load(self.from_path(path))
def test_from_component(self, path):
c = loader.Command()
c.from_component(application.get_app())
calls = [c[0][0] for c in path.call_args_list]
expected = [
'data/lookuplists/lookuplists.json', 'data/lookuplists/drug.json',
'data/lookuplists/condition.json'
]
for e in expected:
self.assertTrue(len([c for c in calls if c.endswith(e)]) == 1)
def write_to_many_files(self, data):
app_dir = application.get_app().directory()
for listname in data:
filepath = os.path.abspath(
os.path.join(
app_dir, 'data', 'lookuplists', '{0}.json'.format(listname)
)
)
contents = {listname: data[listname]}
self.write_to_file(contents, filepath)
def from_component(self, component):
# Start with the initial lookuplists.json
filename = ffs.Path(LOOKUPLIST_LOCATION.format(component.directory()))
self.load(self.from_path(filename))
# then work throught the lookuplists we know about
for lookuplist in lookuplists.LookupList.__subclasses__():
path = ffs.Path("{0}/data/lookuplists/{1}.json".format(
application.get_app().directory(),
lookuplist.get_api_name()
))
self.load(self.from_path(path))
def test_from_component(self, path):
c = loader.Command()
c.from_component(application.get_app())
calls = [c[0][0] for c in path.call_args_list]
expected = [
os.path.join('data', 'lookuplists', 'lookuplists.json'),
os.path.join('data', 'lookuplists', 'drug.json'),
os.path.join('data', 'lookuplists', 'condition.json'),
]
for e in expected:
self.assertTrue(len([c for c in calls if c.endswith(e)]) == 1)
def menu(context):
"""
Render the menu for this application.
"""
context = copy.copy(context)
app = application.get_app()
menu = app.get_menu(user=context['user'])
context.dicts.append({
'menu': menu,
})
return context
def __init__(self, user=None):
self.user = user
self.items = []
from opal.core import application, plugins
app = application.get_app()
# If we don't += this here, we start appending to the
# list attached to the active Application class.
# Which is suboptimal.
self.items = app.get_menu_items(self.user)
for plugin in plugins.OpalPlugin.list():
self.items.extend(plugin.get_menu_items(self.user))
def __init__(self, user=None):
self.user = user
self.items = []
from opal.core import application, plugins
app = application.get_app()
# If we don't += this here, we start appending to the
# list attached to the active Application class.
# Which is suboptimal.
self.items = app.get_menu_items(self.user)
for plugin in plugins.OpalPlugin.list():
self.items.extend(plugin.get_menu_items(self.user))
def __init__(self, user=None):
self.user = user
self.items = []
from opal.core import application, plugins
app = application.get_app()
# If we don't += this here, we start appending to the
# list attached to the active Application class.
# Which is suboptimal.
app_items = app.get_menu_items(user=self.user)
warnthem = """
Declaring Opal menu items as python dicts will no longer work in Opal 0.9.0.
Menu items should be instances of opal.core.menus.MenuItem
You should convert {0}
Please consult the Opal documentation on menus for more information.
"""
for item in app_items:
if isinstance(item, MenuItem):
self.items.append(item)
else:
self.items.append(MenuItem(**item))
warnings.warn(warnthem.format(item),
DeprecationWarning,
stacklevel=2)
for plugin in plugins.OpalPlugin.list():
for item in plugin.menuitems:
if isinstance(item, MenuItem):
self.items.append(item)
else:
self.items.append(MenuItem(**item))
warnings.warn(warnthem.format(item),
DeprecationWarning,
stacklevel=2)
from rest_framework import routers, status, viewsets
from rest_framework.response import Response
from opal.models import (
Episode, Synonym, Patient, PatientRecordAccess, PatientSubrecord
)
from opal.core import application, exceptions, metadata, plugins, schemas
from opal.core.lookuplists import LookupList
from opal.utils import stringport, camelcase_to_underscore
from opal.core.subrecords import subrecords
from opal.core.views import _get_request_data, _build_json_response
from opal.core.patient_lists import (
PatientList, TaggedPatientListMetadata, FirstListMetadata
)
app = application.get_app()
# TODO This is stupid - we can fully deprecate this please?
try:
options = stringport(settings.OPAL_OPTIONS_MODULE)
micro_test_defaults = options.micro_test_defaults
except AttributeError:
class options:
model_names = []
micro_test_defaults = []
class OPALRouter(routers.DefaultRouter):
def get_default_base_name(self, viewset):
name = getattr(viewset, 'base_name', None)
if name is None:
return routers.DefaultRouter.get_default_base_name(self, viewset)
def items():
app = application.get_app()
for i in app.menuitems:
yield i
from django.contrib.contenttypes.models import ContentType
from rest_framework import routers, status, viewsets
from rest_framework.permissions import IsAuthenticated
from opal.models import (
Episode, Synonym, Patient, PatientRecordAccess,
PatientSubrecord, UserProfile
)
from opal.core import application, exceptions, metadata, plugins, schemas
from opal.core.lookuplists import LookupList
from opal.core.subrecords import subrecords
from opal.core.views import json_response
from opal.core.patient_lists import PatientList
app = application.get_app()
class OPALRouter(routers.DefaultRouter):
def get_default_base_name(self, viewset):
name = getattr(viewset, 'base_name', None)
if name is None:
return routers.DefaultRouter.get_default_base_name(self, viewset)
return name
router = OPALRouter()
def item_from_pk(fn):
"""
def scripts():
app = application.get_app()
for javascript in app.javascripts:
yield javascript
def scripts():
app = application.get_app()
for javascript in app.javascripts:
yield javascript
def test_created_with_the_default_episode(self):
_, episode = self.new_patient_and_episode_please()
self.assertEqual(application.get_app().default_episode_category,
episode.category_name)
def scripts():
app = application.get_app()
for javascript in app.core_javascripts[namespace]:
yield javascript
def test_get_app(self, subclasses):
mock_app = MagicMock('Mock App')
subclasses.return_value = [mock_app]
self.assertEqual(mock_app, application.get_app())
def items():
app = application.get_app()
for i in app.menuitems:
yield i
def items():
app = application.get_app()
for i in app.get_menu_items(user=context['user']):
yield i
def opal_angular_deps():
app = application.get_app()
return dict(deps=app.get_all_angular_module_deps())
def scripts():
app = application.get_app()
for javascript in app.core_javascripts[namespace]:
yield javascript
def test_get_app(self, subclasses):
mock_app = MagicMock('Mock App')
subclasses.return_value = [mock_app]
self.assertEqual(mock_app, application.get_app())
def test_created_with_the_default_episode(self):
_, episode = self.new_patient_and_episode_please()
self.assertEqual(
application.get_app().default_episode_category,
episode.category_name
)
def get_default_episode_type():
app = application.get_app()
return app.default_episode_category
def styles():
app = application.get_app()
for style in app.get_styles():
yield style
