def check_issns(row_object):
__tracebackhide__ = True
row = row_object.row
line_str = '{}, line {}: '.format(row_object.file_name, row_object.line_number)
for issn_column in [row["issn"], row["issn_print"], row["issn_electronic"], row["issn_l"]]:
if issn_column != "NA":
if not oat.is_wellformed_ISSN(issn_column):
fail(line_str + 'value "' + issn_column + '" is not a ' +
'well-formed ISSN')
elif not oat.is_valid_ISSN(issn_column):
fail(line_str + 'value "' + issn_column + '" is no valid ' +
'ISSN (check digit mismatch)')
issn_l = row["issn_l"]
if issn_l != "NA":
msg = line_str + "Two entries share a common {} ({}), but the issn_l differs ({} vs {})"
issn = row["issn"]
if issn != "NA":
for reduced_row in issn_dict[issn]:
if reduced_row["issn_l"] != issn_l:
fail(msg.format("issn", issn, issn_l, reduced_row["issn_l"]))
issn_p = row["issn_print"]
if issn_p != "NA":
for reduced_row in issn_p_dict[issn_p]:
if reduced_row["issn_l"] != issn_l:
fail(msg.format("issn_p", issn_p, issn_l, reduced_row["issn_l"]))
issn_e = row["issn_electronic"]
if issn_e != "NA":
for reduced_row in issn_e_dict[issn_e]:
if reduced_row["issn_l"] != issn_l:
fail(msg.format("issn_e", issn_e, issn_l, reduced_row["issn_l"]))
def check_issns(row_object):
__tracebackhide__ = True
row = row_object.row
line_str = '{}, line {}: '.format(row_object.file_name, row_object.line_number)
for issn_column in [row["issn"], row["issn_print"], row["issn_electronic"], row["issn_l"]]:
if issn_column != "NA":
if not oat.is_wellformed_ISSN(issn_column):
pytest.fail(line_str + 'value "' + issn_column + '" is not a ' +
'well-formed ISSN')
if not oat.is_valid_ISSN(issn_column):
pytest.fail(line_str + 'value "' + issn_column + '" is no valid ' +
'ISSN (check digit mismatch)')
def check_issns(row_object):
__tracebackhide__ = True
row = row_object.row
line_str = '{}, line {}: '.format(row_object.file_name,
row_object.line_number)
for issn_column in [
row["issn"], row["issn_print"], row["issn_electronic"],
row["issn_l"]
]:
if issn_column != "NA":
if not oat.is_wellformed_ISSN(issn_column):
pytest.fail(line_str + 'value "' + issn_column +
'" is not a ' + 'well-formed ISSN')
if not oat.is_valid_ISSN(issn_column):
pytest.fail(line_str + 'value "' + issn_column +
'" is no valid ' + 'ISSN (check digit mismatch)')
def main():
analysed_journals = {}
if os.path.isfile(JOURNALTOC_RESULTS_FILE):
with open(JOURNALTOC_RESULTS_FILE) as results:
reader = DictReader(results)
for line in reader:
title = line["journal_full_title"]
if title not in analysed_journals:
analysed_journals[title] = line
remaining_journals = {}
with open(APC_DE_FILE) as apc_de:
reader = DictReader(apc_de)
for line in reader:
title = line["journal_full_title"]
if title in analysed_journals:
continue
if title not in remaining_journals:
remaining_journals[title] = {
"journal_full_title": line["journal_full_title"],
"publisher": line["publisher"],
"is_hybrid": line["is_hybrid"],
"issns": []
}
for issn_type in ISSN_TYPES:
issn = line[issn_type]
if issn not in remaining_journals[title][
"issns"] and oat.is_wellformed_ISSN(issn):
remaining_journals[title]["issns"].append(issn)
is_hybrid = line["is_hybrid"]
if is_hybrid in [
"TRUE", "FALSE"
] and is_hybrid != remaining_journals[title]["is_hybrid"]:
remaining_journals[title]["is_hybrid"] = "FLIPPED"
msg = "{} unique journals found in OpenAPC core data file, {} already analysed, {} remaining."
oat.print_g(
msg.format(
len(remaining_journals) + len(analysed_journals),
len(analysed_journals), len(remaining_journals)))
count = 0
for title, fields in remaining_journals.items():
count += 1
entry = {field: None for field in RESULTS_FILE_FIELDNAMES}
entry["journal_full_title"] = title
for key in ["publisher", "is_hybrid"]:
entry[key] = fields[key]
entry["issns"] = "|".join(fields["issns"])
msg = 'Analysing journal "{}" ({}), OpenAPC hybrid status is {}...'
msg = msg.format(entry["journal_full_title"], entry["issns"],
entry["is_hybrid"])
oat.print_b(msg)
for issn in fields["issns"]:
oat.print_y("Looking up ISSN " + issn + "...")
jtoc_metadata = get_jtoc_metadata(issn)
if jtoc_metadata["jtoc_id"] is not None:
entry["in_jtoc"] = "TRUE"
for key in ["jtoc_publisher", "jtoc_title"]:
entry[key] = jtoc_metadata[key]
journal_type = get_jtoc_journal_type(jtoc_metadata["jtoc_id"])
entry["jtoc_type"] = journal_type
msg = 'Journal found ("{}"), JournalTOCs type is {}'
oat.print_g(msg.format(entry["jtoc_title"],
entry["jtoc_type"]))
break
else:
oat.print_r("None of the associated ISSNS found in JTOCs!")
analysed_journals[title] = entry
if count < BATCH_SIZE:
sleep(2)
else:
break
with open(JOURNALTOC_RESULTS_FILE, "w") as res_file:
writer = DictWriter(res_file, fieldnames=RESULTS_FILE_FIELDNAMES)
writer.writeheader()
for _, entry in analysed_journals.items():
writer.writerow(entry)